Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3OWG
DownloadVisualize
BU of 3owg by Molmil
Crystal structure of vaccinia virus Polyadenylate polymerase(vp55)
分子名称: Poly(A) polymerase catalytic subunit
著者Li, C, Li, H, Zhou, S, Gershon, P.D, Poulos, T.L.
登録日2010-09-17
公開日2011-09-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Domain-level rocking motion within a polymerase that translocates on single-stranded nucleic acid.
Acta Crystallogr.,Sect.D, 69, 2013
8GS8
DownloadVisualize
BU of 8gs8 by Molmil
cryo-EM structure of the human respiratory complex II
分子名称: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
著者Du, Z, Zhou, X, Lai, Y, Xu, J, Zhang, Y, Zhou, S, Liu, F, Gao, Y, Gong, H, Rao, Z.
登録日2022-09-05
公開日2023-05-10
実験手法ELECTRON MICROSCOPY (2.86 Å)
主引用文献Structure of the human respiratory complex II.
Proc.Natl.Acad.Sci.USA, 120, 2023
3ERC
DownloadVisualize
BU of 3erc by Molmil
Crystal structure of the heterodimeric vaccinia virus mRNA polyadenylate polymerase with three fragments of RNA and 3'-deoxy ATP
分子名称: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase, ...
著者Li, C, Li, H, Zhou, S, Poulos, T.L, Gershon, P.D.
登録日2008-10-01
公開日2009-06-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.21 Å)
主引用文献Polymerase Translocation with Respect to Single-Stranded Nucleic Acid: Looping or Wrapping of Primer around a Poly(A) Polymerase
Structure, 17, 2009
3ER8
DownloadVisualize
BU of 3er8 by Molmil
Crystal structure of the heterodimeric vaccinia virus mRNA polyadenylate polymerase complex with two fragments of RNA
分子名称: Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase, Poly(A) polymerase catalytic subunit, RNA/DNA chimera 5'-D(CP*CP*)R(UP*UP*)D(C)-3', ...
著者Li, C, Li, H, Zhou, S, Poulos, T.L, Gershon, P.D.
登録日2008-10-01
公開日2009-06-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献Polymerase Translocation with Respect to Single-Stranded Nucleic Acid: Looping or Wrapping of Primer around a Poly(A) Polymerase
Structure, 17, 2009
3ER9
DownloadVisualize
BU of 3er9 by Molmil
Crystal structure of the heterodimeric vaccinia virus mRNA polyadenylate polymerase complex with UU and 3'-deoxy ATP
分子名称: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, 5'-R(UP*U)-3', CALCIUM ION, ...
著者Li, C, Li, H, Zhou, S, Poulos, T.L, Gershon, P.D.
登録日2008-10-01
公開日2009-06-16
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Polymerase Translocation with Respect to Single-Stranded Nucleic Acid: Looping or Wrapping of Primer around a Poly(A) Polymerase
Structure, 17, 2009
1XZY
DownloadVisualize
BU of 1xzy by Molmil
Solution structure of the P30-trans form of Alpha Hemoglobin Stabilizing Protein (AHSP)
分子名称: Alpha-hemoglobin stabilizing protein
著者Gell, D.A, Feng, L, Zhou, S, Kong, Y, Lee, C, Weiss, M.J, Shi, Y, Mackay, J.P.
登録日2004-11-12
公開日2004-12-21
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Molecular mechanism of AHSP-mediated stabilization of alpha-hemoglobin
Cell(Cambridge,Mass.), 119, 2004
1Y01
DownloadVisualize
BU of 1y01 by Molmil
Crystal structure of AHSP bound to Fe(II) alpha-hemoglobin
分子名称: 6-[(CYCLOHEXYLACETYL)(2-HYDROXYETHYL)AMINO]-6-DEOXY-D-XYLO-HEXITOL, Alpha-hemoglobin stabilizing protein, Hemoglobin alpha chain, ...
著者Feng, L, Gell, D.A, Zhou, S, Gu, L, Gow, A.J, Weiss, M.J, Mackay, J.P, Shi, Y.
登録日2004-11-14
公開日2004-12-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Molecular mechanism of AHSP-mediated stabilization of alpha-hemoglobin.
Cell(Cambridge,Mass.), 119, 2004
1Z8U
DownloadVisualize
BU of 1z8u by Molmil
Crystal structure of oxidized alpha hemoglobin bound to AHSP
分子名称: Alpha-hemoglobin stabilizing protein, Hemoglobin alpha chain, PROTOPORPHYRIN IX CONTAINING FE
著者Feng, L, Zhou, S, Gu, L, Gell, D.A, Mackay, J.P, Weiss, M.J, Gow, A.J, Shi, Y.
登録日2005-03-31
公開日2005-06-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of oxidized alpha-haemoglobin bound to AHSP reveals a protective mechanism for haem.
Nature, 435, 2005
8OR1
DownloadVisualize
BU of 8or1 by Molmil
Co-crystal strucutre of PD-L1 with low molecular weight inhibitor
分子名称: 5-[[5-[[2-chloranyl-3-(2-fluorophenyl)phenyl]methoxy]-2-[(~{E})-2-hydroxyethyliminomethyl]phenoxy]methyl]pyridine-3-carbonitrile, Programmed cell death 1 ligand 1
著者Zhang, H, Zhou, S, Wu, C, Zhu, M, Yu, Q, Wang, X, Awadasseid, A, Plewka, J, Magiera-Mularz, K, Wu, Y, Zhang, W.
登録日2023-04-12
公開日2023-08-02
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Design, Synthesis, and Antitumor Activity Evaluation of 2-Arylmethoxy-4-(2,2'-dihalogen-substituted biphenyl-3-ylmethoxy) Benzylamine Derivatives as Potent PD-1/PD-L1 Inhibitors.
J.Med.Chem., 66, 2023
4YHH
DownloadVisualize
BU of 4yhh by Molmil
Crystal structure of the 30S ribosomal subunit from Thermus thermophilus in complex with tigecycline
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Schedlbauer, A, Kaminishi, T, Ochoa-Lizarralde, B, Dhimole, N, Zhou, S, Lopez-Alonso, J.P, Connell, S.R, Fucini, P.
登録日2015-02-27
公開日2015-04-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.417 Å)
主引用文献Structural characterization of an alternative mode of tigecycline binding to the bacterial ribosome.
Antimicrob.Agents Chemother., 59, 2015
7BR2
DownloadVisualize
BU of 7br2 by Molmil
BT4096 a gut microbial diltiazem-metabolizing enzyme
分子名称: Lipolytic enzyme, G-D-S-L family
著者Ko, T.-P, Chen, C.-C, Guo, R.-T.
登録日2020-03-26
公開日2020-05-06
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Structure of a gut microbial diltiazem-metabolizing enzyme suggests possible substrate binding mode.
Biochem.Biophys.Res.Commun., 527, 2020
6ZDB
DownloadVisualize
BU of 6zdb by Molmil
NMR structural analysis of yeast Cox13 reveals its C-terminus in interaction with ATP
分子名称: Cytochrome c oxidase subunit 13, mitochondrial
著者Shu, Z, Pontus, P, Peter, B, Lena, M, Pia, A.
登録日2020-06-14
公開日2021-05-19
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR structural analysis of the yeast cytochrome c oxidase subunit Cox13 and its interaction with ATP.
Bmc Biol., 19, 2021
6SRN
DownloadVisualize
BU of 6srn by Molmil
Structural basis for control of antibiotic production by bacterial hormones
分子名称: 4-(Hydroxymethyl)-2-propylfuran-3-carboxylic acid, GLYCEROL, TetR family transcriptional regulator
著者Fulop, V.
登録日2019-09-05
公開日2020-09-30
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Molecular basis for control of antibiotic production by a bacterial hormone.
Nature, 590, 2021
7KY1
DownloadVisualize
BU of 7ky1 by Molmil
Molecular basis for control of antibiotic production by a bacterial hormones
分子名称: TetR family transcriptional regulator
著者Bhukya, H, Fulop, V.
登録日2020-12-06
公開日2021-02-03
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.5000335 Å)
主引用文献Molecular basis for control of antibiotic production by a bacterial hormone.
Nature, 590, 2021
6IJI
DownloadVisualize
BU of 6iji by Molmil
Crystal structure of PDE10 in complex with inhibitor 2b
分子名称: 2-{2-[5-methyl-1-(pyridin-4-yl)-1H-benzimidazol-2-yl]ethyl}-1H-benzo[de]isoquinoline-1,3(2H)-dione, MAGNESIUM ION, ZINC ION, ...
著者Huang, Y.Y, Yu, Y.F, Zhang, C, Wu, D, Wu, Y, Luo, H.B.
登録日2018-10-10
公開日2019-04-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Validation of Phosphodiesterase-10 as a Novel Target for Pulmonary Arterial Hypertension via Highly Selective and Subnanomolar Inhibitors.
J. Med. Chem., 62, 2019
6IJH
DownloadVisualize
BU of 6ijh by Molmil
Crystal structure of PDE10 in complex with inhibitor AF-399/14387019
分子名称: 2-[2-(4-phenyl-5-sulfanylidene-4,5-dihydro-1H-1,2,4-triazol-3-yl)ethyl]-1H-benzo[de]isoquinoline-1,3(2H)-dione, MAGNESIUM ION, ZINC ION, ...
著者Huang, Y.Y, Yu, Y.F, Zhang, C, Wu, D, Wu, Y, Luo, H.B.
登録日2018-10-10
公開日2019-04-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Validation of Phosphodiesterase-10 as a Novel Target for Pulmonary Arterial Hypertension via Highly Selective and Subnanomolar Inhibitors.
J. Med. Chem., 62, 2019
7BOK
DownloadVisualize
BU of 7bok by Molmil
Cryo-EM structure of the encapsulated DyP-type peroxidase from Mycobacterium smegmatis
分子名称: Dyp-type peroxidase, PROTOPORPHYRIN IX CONTAINING FE
著者Tang, Y.T, Mu, A, Gong, H.R, Wang, Q, Rao, Z.H.
登録日2020-03-19
公開日2021-03-24
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM structure of Mycobacterium smegmatis DyP-loaded encapsulin.
Proc.Natl.Acad.Sci.USA, 118, 2021
7BOJ
DownloadVisualize
BU of 7boj by Molmil
Cryo-EM structure of the encapsulin shell from Mycobacterium smegmatis
分子名称: 29 kDa antigen Cfp29
著者Tang, Y.T, Mu, A, Gong, H.R, Wang, Q, Rao, Z.H.
登録日2020-03-19
公開日2021-03-24
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Cryo-EM structure of Mycobacterium smegmatis DyP-loaded encapsulin.
Proc.Natl.Acad.Sci.USA, 118, 2021
8FAZ
DownloadVisualize
BU of 8faz by Molmil
Cryo-EM structure of the human BCDX2 complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA repair protein RAD51 homolog 2, DNA repair protein RAD51 homolog 3, ...
著者Jia, L, Wasmuth, E.V, Ruben, E.A, Sung, P, Rawal, Y, Greene, E.C, Meir, A, Olsen, S.K.
登録日2022-11-29
公開日2023-06-21
最終更新日2023-08-02
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Structural insights into BCDX2 complex function in homologous recombination.
Nature, 619, 2023
6W51
DownloadVisualize
BU of 6w51 by Molmil
Structure of the antibody fragment H2 in complex with HLA-A*02:01/p53R175H
分子名称: Beta-2-microglobulin, Cellular tumor antigen p53 peptide, Immunoglobulin heavy chain H2, ...
著者Wright, K.M, Gabelli, S.B.
登録日2020-03-12
公開日2021-03-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.53 Å)
主引用文献Targeting a neoantigen derived from a common TP53 mutation.
Science, 371, 2021
8XMS
DownloadVisualize
BU of 8xms by Molmil
Crystal structure of Porcine Circovirus type II Rep ATPase domain
分子名称: Replication-associated protein
著者Guan, S.Y, Song, Y.F.
登録日2023-12-28
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the ATPase domain of porcine circovirus type 2 Rep protein.
J.Gen.Virol., 105, 2024
7RWG
DownloadVisualize
BU of 7rwg by Molmil
"Crystal structure of human methionine adenosyltransferase 2A (MAT2A) in complex with SAM and allosteric inhibitor AGI-43192
分子名称: (8R)-8-(4-chlorophenyl)-6-(2-methyl-2H-indazol-5-yl)-2-[(2,2,2-trifluoroethyl)amino]-5,8-dihydropyrido[4,3-d]pyrimidin-7(6H)-one, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Jin, L, Padyana, A.K.
登録日2021-08-19
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献Leveraging Structure-Based Drug Design to Identify Next-Generation MAT2A Inhibitors, Including Brain-Penetrant and Peripherally Efficacious Leads.
J.Med.Chem., 65, 2022
7RW7
DownloadVisualize
BU of 7rw7 by Molmil
Crystal structure of human methionine adenosyltransferase 2A (MAT2A) in complex with SAM and allosteric inhibitor Compound 9
分子名称: (3'R)-2-[(cyclopropylmethyl)amino]-6-(4-methoxyphenyl)-1'-[(1H-pyrazol-5-yl)methyl]-5,6-dihydro-7H-spiro[pyrido[4,3-d]pyrimidine-8,3'-pyrrolidin]-7-one, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Jin, L, Padyana, A.K.
登録日2021-08-19
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Leveraging Structure-Based Drug Design to Identify Next-Generation MAT2A Inhibitors, Including Brain-Penetrant and Peripherally Efficacious Leads.
J.Med.Chem., 65, 2022
7RW5
DownloadVisualize
BU of 7rw5 by Molmil
Crystal structure of human methionine adenosyltransferase 2A (MAT2A) in complex with SAM and allosteric inhibitor Compound 1
分子名称: (3'R)-N-(cyclopropylmethyl)-1'-[(2-fluorophenyl)methyl]-4-methyl-5H,7H-spiro[pyrano[4,3-d]pyrimidine-8,3'-pyrrolidin]-2-amine, S-ADENOSYLMETHIONINE, S-adenosylmethionine synthase isoform type-2
著者Jin, L, Padyana, A.K.
登録日2021-08-19
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Leveraging Structure-Based Drug Design to Identify Next-Generation MAT2A Inhibitors, Including Brain-Penetrant and Peripherally Efficacious Leads.
J.Med.Chem., 65, 2022
7RWH
DownloadVisualize
BU of 7rwh by Molmil
Crystal structure of human methionine adenosyltransferase 2A (MAT2A) in complex with SAM and allosteric inhibitor AGI-41998
分子名称: 1,2-ETHANEDIOL, 8-(4-bromophenyl)-6-(4-methoxyphenyl)-2-[2,2,2-tris(fluoranyl)ethylamino]pyrido[4,3-d]pyrimidin-7-ol, CHLORIDE ION, ...
著者Jin, L, Padyana, A.K.
登録日2021-08-19
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Leveraging Structure-Based Drug Design to Identify Next-Generation MAT2A Inhibitors, Including Brain-Penetrant and Peripherally Efficacious Leads.
J.Med.Chem., 65, 2022

220472

件を2024-05-29に公開中

PDB statisticsPDBj update infoContact PDBjnumon