Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3PDD
DownloadVisualize
BU of 3pdd by Molmil
Structures of Clostridium thermocellum CbhA fibronectin(III)-like modules
分子名称: CALCIUM ION, CHLORIDE ION, Glycoside hydrolase, ...
著者Alahuhta, P.M, Lunin, V.V.
登録日2010-10-22
公開日2011-11-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structure and function of the Clostridium thermocellum cellobiohydrolase A X1-module repeat: enhancement through stabilization of the CbhA complex.
Acta Crystallogr.,Sect.D, 68, 2012
6D5C
DownloadVisualize
BU of 6d5c by Molmil
Structure of Caldicellulosiruptor danielii GH10 module of glycoside hydrolase WP_045175321
分子名称: 1,2-ETHANEDIOL, FORMIC ACID, GLYCEROL, ...
著者Alahuhta, P.M, Lunin, V.V.
登録日2018-04-19
公開日2019-04-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Novel multidomain, multifunctional glycoside hydrolases from highly lignocellulolytic Caldicellulosiruptor species
AIChE J., 2019
6D5B
DownloadVisualize
BU of 6d5b by Molmil
Structure of Caldicellulosiruptor danielii CBM3 module of glycoside hydrolase WP_045175321
分子名称: CALCIUM ION, glycoside hydrolase WP_045175321
著者Alahuhta, P.M, Lunin, V.V.
登録日2018-04-19
公開日2019-04-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Novel multidomain, multifunctional glycoside hydrolases from highly lignocellulolytic Caldicellulosiruptor species
AIChE J., 2019
6D5D
DownloadVisualize
BU of 6d5d by Molmil
Structure of Caldicellulosiruptor danielii GH48 module of glycoside hydrolase WP_045175321
分子名称: CALCIUM ION, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, glycoside hydrolase WP_045175321
著者Alahuhta, P.M, Lunin, V.V.
登録日2018-04-19
公開日2019-04-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Novel multidomain, multifunctional glycoside hydrolases from highly lignocellulolytic Caldicellulosiruptor species
AIChE J., 2019
5BV9
DownloadVisualize
BU of 5bv9 by Molmil
The Structure of Bacillus pumilus GH48 in complex with cellobiose
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Alahuhta, P.M, Lunin, V.V.
登録日2015-06-04
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Strategies to reduce end-product inhibition in family 48 glycoside hydrolases.
Proteins, 84, 2016
3K4Z
DownloadVisualize
BU of 3k4z by Molmil
Crystal Structure of the Cellulosomal CBM4 from Clostridium thermocellum Cellulase CbhA
分子名称: 1-O-phosphono-beta-D-glucopyranose, Glycoside hydrolase family 9, MAGNESIUM ION, ...
著者Alahuhta, P.M, Xu, Q, Himmel, M.E, Lunin, V.V.
登録日2009-10-06
公開日2010-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献The unique binding mode of cellulosomal CBM4 from Clostridium thermocellum cellobiohydrolase A.
J.Mol.Biol., 402, 2010
3MPC
DownloadVisualize
BU of 3mpc by Molmil
The crystal structure of a Fn3-like protein from Clostridium thermocellum
分子名称: Fn3-like protein, SULFATE ION
著者Alahuhta, M.P, Xu, Q, Brunecky, R, Lunin, V.V.
登録日2010-04-26
公開日2010-08-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of a fibronectin type III-like module from Clostridium thermocellum.
Acta Crystallogr.,Sect.F, 66, 2010
1Q7L
DownloadVisualize
BU of 1q7l by Molmil
Zn-binding domain of the T347G mutant of human aminoacylase-I
分子名称: Aminoacylase-1, GLYCINE, ZINC ION
著者Lindner, H.A, Lunin, V.V, Alary, A, Hecker, R, Cygler, M, Menard, R.
登録日2003-08-19
公開日2004-01-20
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Essential roles of zinc ligation and enzyme dimerization for catalysis in the aminoacylase-1/M20 family.
J.Biol.Chem., 278, 2003
1YSQ
DownloadVisualize
BU of 1ysq by Molmil
The crystal structure of transcriptional regulator YaiJ
分子名称: HTH-type transcriptional regulator yiaJ, PHOSPHATE ION
著者Bochkarev, A, Lunin, V.V, Ezersky, A, Evdokimova, E, Skarina, T, Xu, X, Borek, D, Edwards, A.M, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2005-02-08
公開日2005-03-22
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural study of effector binding specificity in IclR transcriptional regulators
To be Published
1YSP
DownloadVisualize
BU of 1ysp by Molmil
Crystal structure of the C-terminal domain of E. coli transcriptional regulator KdgR.
分子名称: SULFATE ION, Transcriptional regulator kdgR
著者Bochkarev, A, Lunin, V.V, Ezersky, A, Evdokimova, E, Skarina, T, Xu, X, Borek, D, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2005-02-08
公開日2005-03-22
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural study of effector binding specificity in IclR transcriptional regulators
To be Published
2FNI
DownloadVisualize
BU of 2fni by Molmil
PseC aminotransferase involved in pseudoaminic acid biosynthesis
分子名称: PYRIDOXAL-5'-PHOSPHATE, aminotransferase
著者Cygler, M, Matte, A, Lunin, V.V, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2006-01-11
公開日2006-01-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural and Functional Characterization of PseC, an Aminotransferase Involved in the Biosynthesis of Pseudaminic Acid, an Essential Flagellar Modification in Helicobacter pylori
J.Biol.Chem., 281, 2006
2FN6
DownloadVisualize
BU of 2fn6 by Molmil
Helicobacter pylori PseC, aminotransferase involved in the biosynthesis of pseudoaminic acid
分子名称: AMINOTRANSFERASE, PHOSPHATE ION
著者Cygler, M, Lunin, V.V, Matte, A, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2006-01-10
公開日2006-01-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.483 Å)
主引用文献Structural and Functional Characterization of PseC, an Aminotransferase Involved in the Biosynthesis of Pseudaminic Acid, an Essential Flagellar Modification in Helicobacter pylori
J.Biol.Chem., 281, 2006
2G7L
DownloadVisualize
BU of 2g7l by Molmil
Crystal structure of putative transcription regulator SCO7704 from Streptomyces coelicor
分子名称: TetR-family transcriptional regulator
著者Ezersky, A, Lunin, V.V, Skarina, T, Wierzbicka, M, Joachimiak, A, Edwards, A.M, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2006-02-28
公開日2006-03-14
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of putative transcription regulator SCO7704 from Streptomyces coelicor
To be Published
1Y6Z
DownloadVisualize
BU of 1y6z by Molmil
Middle domain of Plasmodium falciparum putative heat shock protein PF14_0417
分子名称: heat shock protein, putative
著者Lunin, V.V, Botchkareva, E, Loppnau, P, Amani, M, Bray, J, Vedadi, M, Edwards, A, Arrowsmith, C, Sundstrom, M, Bochkarev, A, Hui, R, Plotnikova, O, Structural Genomics Consortium (SGC)
登録日2004-12-07
公開日2005-02-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Genome-scale protein expression and structural biology of Plasmodium falciparum and related Apicomplexan organisms.
Mol.Biochem.Parasitol., 151, 2007
2IGQ
DownloadVisualize
BU of 2igq by Molmil
Human euchromatic histone methyltransferase 1
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION, euchromatic histone methyltransferase 1
著者Min, J, Wu, H, Antoshenko, T, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
登録日2006-09-23
公開日2006-10-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural biology of human H3K9 methyltransferases
Plos One, 5, 2010
2WEI
DownloadVisualize
BU of 2wei by Molmil
Crystal structure of the kinase domain of Cryptosporidium parvum calcium dependent protein kinase in complex with 3-MB-PP1
分子名称: 1-tert-butyl-3-(3-methylbenzyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine, CALMODULIN-DOMAIN PROTEIN KINASE 1, PUTATIVE
著者Roos, A.K, King, O, Chaikuad, A, Zhang, C, Shokat, K.M, Wernimont, A.K, Artz, J.D, Lin, L, MacKenzie, F.I, Finerty, P.J, Vedadi, M, Schapira, M, Indarte, M, Kozieradzki, I, Pike, A.C.W, Fedorov, O, Doyle, D, Muniz, J, Arrowsmith, C.H, Weigelt, J, Edwards, A, Bountra, C, von Delft, F, Heightman, T, Hui, R.
登録日2009-03-31
公開日2009-04-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The Cryptosporidium Parvum Kinome.
Bmc Genomics, 12, 2011
3BYV
DownloadVisualize
BU of 3byv by Molmil
Crystal structure of Toxoplasma gondii specific rhoptry antigen kinase domain
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, Rhoptry kinase
著者Wernimont, A.K, Lunin, V.V, Yang, C, Lew, J, Kozieradzki, I, Lin, Y.H, Sun, X, Khuu, C, Zhao, Y, Schapira, M, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bochkarev, A, Hui, R, Sibley, D, Qiu, W, Structural Genomics Consortium (SGC)
登録日2008-01-16
公開日2008-01-29
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Novel structural and regulatory features of rhoptry secretory kinases in Toxoplasma gondii.
Embo J., 28, 2009
6SDA
DownloadVisualize
BU of 6sda by Molmil
Bd2924 C10 acyl-coenzymeA bound form
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Probable acyl-CoA dehydrogenase, decanoyl-CoA
著者Lovering, A.L, Harding, C.J.
登録日2019-07-26
公開日2019-09-11
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Target highlights in CASP13: Experimental target structures through the eyes of their authors.
Proteins, 87, 2019
6SD8
DownloadVisualize
BU of 6sd8 by Molmil
Bd2924 apo-form
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Probable acyl-CoA dehydrogenase
著者Lovering, A.L, Harding, C.J.
登録日2019-07-26
公開日2019-09-11
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Target highlights in CASP13: Experimental target structures through the eyes of their authors.
Proteins, 87, 2019
1QL0
DownloadVisualize
BU of 1ql0 by Molmil
Sm Endonuclease from Seratia marcenscens at atomic resolution
分子名称: MAGNESIUM ION, NUCLEASE
著者Perbandt, M, Mikhailov, A.M, Betzel, C.H.
登録日1999-08-18
公開日2000-05-07
最終更新日2019-07-24
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Atomic Structure of the Serratia Marcescens Endonuclease at 1.1 A Resolution and the Enzyme Reaction Mechanism.
Acta Crystallogr.,Sect.D, 56, 2000
8TUK
DownloadVisualize
BU of 8tuk by Molmil
Alvinella ASCC1 KH and Phosphodiesterase/Ligase Domain
分子名称: 1,2-ETHANEDIOL, Activating signal cointegrator 1 complex subunit 1, IMIDAZOLE
著者Tsutakawa, S.E, Tainer, J.A, Arvai, A.S, Chinnam, N.B.
登録日2023-08-16
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献ASCC1 structures and bioinformatics reveal a novel helix-clasp-helix RNA-binding motif linked to a two-histidine phosphodiesterase.
J.Biol.Chem., 300, 2024
8TLY
DownloadVisualize
BU of 8tly by Molmil
Human ASCC1 Phosphodiesterase/Ligase Domain
分子名称: Activating signal cointegrator 1 complex subunit 1
著者Tsutakawa, S.E, Tainer, J.A, Arvai, A.S, Thapar, R.
登録日2023-07-27
公開日2024-07-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献ASCC1 structures and bioinformatics reveal a novel helix-clasp-helix RNA-binding motif linked to a two-histidine phosphodiesterase.
J.Biol.Chem., 300, 2024
1NI9
DownloadVisualize
BU of 1ni9 by Molmil
2.0 A structure of glycerol metabolism protein from E. coli
分子名称: Protein glpX, SULFATE ION
著者Sanishvili, R, Brunzelle, J, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2002-12-23
公開日2003-07-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and Biochemical Characterization of the Type II Fructose-1,6-bisphosphatase GlpX from Escherichia coli.
J.Biol.Chem., 284, 2009
4YZ0
DownloadVisualize
BU of 4yz0 by Molmil
C. bescii Family 3 pectate lyase double mutant K108A/E39Q in complex with trigalacturonic acid
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, ...
著者Alahuhta, P.M, Lunin, V.V.
登録日2015-03-24
公開日2015-12-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献The catalytic mechanism and unique low pH optimum of Caldicellulosiruptor bescii family 3 pectate lyase.
Acta Crystallogr.,Sect.D, 71, 2015
4YZQ
DownloadVisualize
BU of 4yzq by Molmil
C. bescii Family 3 pectate lyase double mutant K108A/Q111N in complex with trigalacturonic acid
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Pectate lyase, ...
著者Alahuhta, P.M, Lunin, V.V.
登録日2015-03-25
公開日2015-12-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献The catalytic mechanism and unique low pH optimum of Caldicellulosiruptor bescii family 3 pectate lyase.
Acta Crystallogr.,Sect.D, 71, 2015

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon