Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3L2D
DownloadVisualize
BU of 3l2d by Molmil
Glycocyamine kinase, beta-beta homodimer from marine worm Namalycastis sp.
分子名称: Glycocyamine kinase beta chain
著者Lim, K, Pullalarevu, S, Herzberg, O.
登録日2009-12-15
公開日2010-03-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for the mechanism and substrate specificity of glycocyamine kinase, a phosphagen kinase family member.
Biochemistry, 49, 2010
3L2E
DownloadVisualize
BU of 3l2e by Molmil
Glycocyamine kinase, alpha-beta heterodimer from marine worm Namalycastis sp.
分子名称: Glycocyamine kinase alpha chain, Glycocyamine kinase beta chain
著者Lim, K, Pullalarevu, S, Herzberg, O.
登録日2009-12-15
公開日2010-03-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for the mechanism and substrate specificity of glycocyamine kinase, a phosphagen kinase family member.
Biochemistry, 49, 2010
5TJ2
DownloadVisualize
BU of 5tj2 by Molmil
Gasdermin-B C-terminal domain containing the polymorphism residues Gly299:Ser306 fused to maltose binding protein
分子名称: Sugar ABC transporter substrate-binding protein,Gasdermin-B fusion protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Chao, L.K, Herzberg, O.
登録日2016-10-03
公開日2017-02-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Human Gasdermin-B and disease: Sulfatide Binding, Caspase cleavage, and Structural impact of Asthma- and IBS-Associated Polymorphism
Proc.Natl.Acad.Sci.Usa, 2017
4GAH
DownloadVisualize
BU of 4gah by Molmil
Human acyl-CoA thioesterases 4 in complex with undecan-2-one-CoA inhibitor
分子名称: Thioesterase superfamily member 4, [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(3R)-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-4-[[3-oxidanylidene-3-[2-[(2R)-2-oxidanylundecyl]sulfanylethylamino]propyl]amino]butyl] hydrogen phosphate
著者Lim, K, Pathak, M.C, Herzberg, O.
登録日2012-07-25
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Correlation of structure and function in the human hotdog-fold enzyme hTHEM4.
Biochemistry, 51, 2012
4FWW
DownloadVisualize
BU of 4fww by Molmil
Crystal structure of the Sema-PSI extracellular domains of human RON receptor tyrosine kinase
分子名称: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
著者Chao, K.L, Herzberg, O.
登録日2012-07-02
公開日2012-08-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structure of the Sema-PSI Extracellular Domain of Human RON Receptor Tyrosine Kinase.
Plos One, 7, 2012
1DBX
DownloadVisualize
BU of 1dbx by Molmil
Crystal structure of cysteinyl-tRNA(Pro) deacylase from H. influenzae (HI1434)
分子名称: cysteinyl-tRNA(Pro) deacylase
著者Zhang, H, Huang, K, Li, Z, Herzberg, O, Structure 2 Function Project (S2F)
登録日1999-11-03
公開日2000-06-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of YbaK protein from Haemophilus influenzae (HI1434) at 1.8 A resolution: functional implications.
Proteins, 40, 2000
1DBU
DownloadVisualize
BU of 1dbu by Molmil
Crystal structure of cysteinyl-tRNA(Pro) deacylase protein from H. influenzae (HI1434)
分子名称: MERCURY (II) ION, cysteinyl-tRNA(Pro) deacylase
著者Zhang, H, Huang, K, Li, Z, Herzberg, O, Structure 2 Function Project (S2F)
登録日1999-11-03
公開日2000-06-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of YbaK protein from Haemophilus influenzae (HI1434) at 1.8 A resolution: functional implications.
Proteins, 40, 2000
3B8I
DownloadVisualize
BU of 3b8i by Molmil
Crystal Structure of Oxaloacetate Decarboxylase from Pseudomonas Aeruginosa (PA4872) in complex with oxalate and Mg2+.
分子名称: GLYCEROL, MAGNESIUM ION, OXALATE ION, ...
著者Narayanan, B.C, Herzberg, O.
登録日2007-11-01
公開日2008-01-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and function of PA4872 from Pseudomonas aeruginosa, a novel class of oxaloacetate decarboxylase from the PEP mutase/isocitrate lyase superfamily.
Biochemistry, 47, 2008
3CA8
DownloadVisualize
BU of 3ca8 by Molmil
Crystal structure of Escherichia coli YdcF, an S-adenosyl-L-methionine utilizing enzyme
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Protein ydcF, SULFATE ION
著者Lim, K, Chao, K, Lehmann, C, Herzberg, O, Structure 2 Function Project (S2F)
登録日2008-02-19
公開日2008-05-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Escherichia coli YdcF binds S-adenosyl-L-methionine and adopts an alpha/beta-fold characteristic of nucleotide-utilizing enzymes.
Proteins, 72, 2008
4OJO
DownloadVisualize
BU of 4ojo by Molmil
Crystal Structure of Putative Tailspike Protein (TSP1, orf210) from Escherichia coli O157:H7 Bacteriohage CBA120 in Complex with Lactose
分子名称: Tailspike protein, ZINC ION, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
著者Chen, C, Herzberg, O.
登録日2014-01-21
公開日2014-03-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of ORF210 from E. coli O157:H1 phage CBA120 (TSP1), a putative tailspike protein.
Plos One, 9, 2014
4OJP
DownloadVisualize
BU of 4ojp by Molmil
Crystal Structure of Putative Tailspike Protein (TSP1, orf210) from Escherichia coli O157:H7 Bacteriohage CBA120 in Complex with Maltose
分子名称: Tailspike protein, ZINC ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Chen, C, Herzberg, O.
登録日2014-01-21
公開日2014-03-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.948 Å)
主引用文献Crystal structure of ORF210 from E. coli O157:H1 phage CBA120 (TSP1), a putative tailspike protein.
Plos One, 9, 2014
3FA4
DownloadVisualize
BU of 3fa4 by Molmil
Crystal structure of 2,3-dimethylmalate lyase, a PEP mutase/isocitrate lyase superfamily member, triclinic crystal form
分子名称: 2,3-dimethylmalate lyase, MAGNESIUM ION
著者Narayanan, B.C, Herzberg, O.
登録日2008-11-14
公開日2009-01-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structure and function of 2,3-dimethylmalate lyase, a PEP mutase/isocitrate lyase superfamily member.
J.Mol.Biol., 386, 2009
3FA3
DownloadVisualize
BU of 3fa3 by Molmil
Crystal structure of 2,3-dimethylmalate lyase, a PEP mutase/isocitrate lyase superfamily member, trigonal crystal form
分子名称: 2,2-difluoro-3,3-dihydroxybutanedioic acid, 2,3-dimethylmalate lyase, GLYCEROL, ...
著者Narayanan, B.C, Herzberg, O.
登録日2008-11-14
公開日2009-01-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure and function of 2,3-dimethylmalate lyase, a PEP mutase/isocitrate lyase superfamily member.
J.Mol.Biol., 386, 2009
3GAY
DownloadVisualize
BU of 3gay by Molmil
Structure of Giardia fructose-1,6-biphosphate aldolase in complex with tagatose-1,6-biphosphate
分子名称: 1,6-di-O-phosphono-D-tagatose, Fructose-bisphosphate aldolase, ZINC ION
著者Galkin, A, Herzberg, O.
登録日2009-02-18
公開日2009-03-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into the substrate binding and stereoselectivity of giardia fructose-1,6-bisphosphate aldolase.
Biochemistry, 48, 2009
3GAK
DownloadVisualize
BU of 3gak by Molmil
Structure of Giardia fructose-1,6-biphosphate aldolase
分子名称: Fructose-bisphosphate aldolase, SULFATE ION, ZINC ION
著者Galkin, A, Herzberg, O.
登録日2009-02-17
公開日2009-03-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural insights into the substrate binding and stereoselectivity of giardia fructose-1,6-bisphosphate aldolase.
Biochemistry, 48, 2009
4OJL
DownloadVisualize
BU of 4ojl by Molmil
Crystal Structure of Putative Tailspike Protein (TSP1, orf210) from Escherichia coli O157:H7 Bacteriohage CBA120 in Complex with Glucose
分子名称: Tailspike protein, ZINC ION, beta-D-glucopyranose
著者Chen, C, Herzberg, O.
登録日2014-01-21
公開日2014-03-26
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of ORF210 from E. coli O157:H1 phage CBA120 (TSP1), a putative tailspike protein.
Plos One, 9, 2014
3GRF
DownloadVisualize
BU of 3grf by Molmil
X-ray Structure of Ornithine Transcarbamoylase from Giardia lamblia
分子名称: NICKEL (II) ION, Ornithine carbamoyltransferase
著者Galkin, A, Herzberg, O.
登録日2009-03-25
公開日2009-06-30
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献X-ray structure and kinetic properties of ornithine transcarbamoylase from the human parasite Giardia lamblia.
Proteins, 76, 2009
3GB6
DownloadVisualize
BU of 3gb6 by Molmil
Structure of Giardia fructose-1,6-biphosphate aldolase D83A mutant in complex with fructose-1,6-bisphosphate
分子名称: 1,6-di-O-phosphono-D-fructose, Fructose-bisphosphate aldolase, ZINC ION
著者Galkin, A, Herzberg, O.
登録日2009-02-18
公開日2009-03-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insights into the substrate binding and stereoselectivity of giardia fructose-1,6-bisphosphate aldolase.
Biochemistry, 48, 2009
2ISV
DownloadVisualize
BU of 2isv by Molmil
Structure of Giardia fructose-1,6-biphosphate aldolase in complex with phosphoglycolohydroxamate
分子名称: PHOSPHOGLYCOLOHYDROXAMIC ACID, Putative fructose-1,6-bisphosphate aldolase, ZINC ION
著者Galkin, A, Herzberg, O.
登録日2006-10-18
公開日2006-12-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Characterization, kinetics, and crystal structures of fructose-1,6-bisphosphate aldolase from the human parasite, Giardia lamblia.
J.Biol.Chem., 282, 2007
2ISW
DownloadVisualize
BU of 2isw by Molmil
Structure of Giardia fructose-1,6-biphosphate aldolase in complex with phosphoglycolohydroxamate
分子名称: PHOSPHOGLYCOLOHYDROXAMIC ACID, Putative fructose-1,6-bisphosphate aldolase, ZINC ION
著者Galkin, A, Herzberg, O.
登録日2006-10-18
公開日2006-12-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Characterization, kinetics, and crystal structures of fructose-1,6-bisphosphate aldolase from the human parasite, Giardia lamblia.
J.Biol.Chem., 282, 2007
2HRW
DownloadVisualize
BU of 2hrw by Molmil
Crystal Structure of Phosphonopyruvate Hydrolase
分子名称: CHLORIDE ION, Phosphonopyruvate hydrolase, SODIUM ION
著者Chen, C.C.H, Herzberg, O.
登録日2006-07-20
公開日2006-10-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure and Kinetics of Phosphonopyruvate Hydrolase from Voriovorax sp. Pal2: New Insight into the Divergence of Catalysis within the PEP Mutase/Isocitrate Lyase Superfamily
Biochemistry, 45, 2006
2HWG
DownloadVisualize
BU of 2hwg by Molmil
Structure of phosphorylated Enzyme I of the phosphoenolpyruvate:sugar phosphotransferase system
分子名称: MAGNESIUM ION, OXALATE ION, Phosphoenolpyruvate-protein phosphotransferase
著者Lim, K, Teplyakov, A, Herzberg, O.
登録日2006-08-01
公開日2006-11-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of phosphorylated enzyme I, the phosphoenolpyruvate:sugar phosphotransferase system sugar translocation signal protein.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2GPR
DownloadVisualize
BU of 2gpr by Molmil
GLUCOSE PERMEASE IIA FROM MYCOPLASMA CAPRICOLUM
分子名称: GLUCOSE-PERMEASE IIA COMPONENT
著者Huang, K, Herzberg, O.
登録日1998-05-19
公開日1998-08-12
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A promiscuous binding surface: crystal structure of the IIA domain of the glucose-specific permease from Mycoplasma capricolum.
Structure, 6, 1998
2HJP
DownloadVisualize
BU of 2hjp by Molmil
Crystal Structure of Phosphonopyruvate Hydrolase Complex with Phosphonopyruvate and Mg++
分子名称: CHLORIDE ION, MAGNESIUM ION, PHOSPHONOPYRUVATE, ...
著者Chen, C.C.H, Herzberg, O.
登録日2006-06-30
公開日2006-10-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and Kinetics of Phosphonopyruvate Hydrolase from Voriovorax sp. Pal2: New Insight into the Divergence of Catalysis within the PEP Mutase/Isocitrate Lyase Superfamily
Biochemistry, 45, 2006
1X6J
DownloadVisualize
BU of 1x6j by Molmil
Crystal structure of ygfY from Escherichia coli
分子名称: Hypothetical protein ygfY
著者Lim, K, Doseeva, V, Sarikaya Demirkan, E, Pullalarevu, S, Krajewski, W, Galkin, A, Howard, A, Herzberg, O, Structure 2 Function Project (S2F)
登録日2004-08-11
公開日2005-02-08
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the YgfY from Escherichia coli, a protein that may be involved in transcriptional regulation
Proteins, 58, 2005

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon