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6IF4
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BU of 6if4 by Molmil
Crystal structure of Tbtudor
分子名称: Histone acetyltransferase
著者Gao, J, Ye, K, Diwu, Y, Liao, S, Tu, X.
登録日2018-09-18
公開日2019-09-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.934 Å)
主引用文献Crystal structure of TbEsa1 presumed Tudor domain from Trypanosoma brucei.
J.Struct.Biol., 209, 2020
6KE6
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BU of 6ke6 by Molmil
3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome
分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ...
著者Du, Y, Ye, K, An, W.
登録日2019-07-03
公開日2020-08-05
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome
To be published
8KHQ
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BU of 8khq by Molmil
Bifunctional sulfoxide synthase OvoA_Th2 in complex with histidine and cysteine
分子名称: 5-histidylcysteine sulfoxide synthase/putative 4-mercaptohistidine N1-methyltranferase, COBALT (II) ION, CYSTEINE, ...
著者Wang, J, Ye, K, Wang, X.Y, Yan, W.P.
登録日2023-08-22
公開日2023-12-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Biochemical and Structural Characterization of OvoA Th2 : A Mononuclear Nonheme Iron Enzyme from Hydrogenimonas thermophila for Ovothiol Biosynthesis.
Acs Catalysis, 13, 2023
7XPL
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BU of 7xpl by Molmil
Crystal structure of a C/D-free RNA-guided RNA 2'-O-methyltransferase
分子名称: BMG3 RNA strand A, BMG3 RNA strand B, C/D box methylation guide ribonucleoprotein complex aNOP56 subunit, ...
著者Wang, J, Ye, K.
登録日2022-05-04
公開日2022-10-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.213 Å)
主引用文献Methylation guide RNAs without box C/D motifs.
Rna, 28, 2022
7VQO
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BU of 7vqo by Molmil
Cryo-EM structure of Ams1 bound to the FW domain of Nbr1
分子名称: Ams1, Nbr1 and malE fusion protein, ZINC ION
著者Zhang, J, Ye, K.
登録日2021-10-20
公開日2022-07-06
実験手法ELECTRON MICROSCOPY (2.19 Å)
主引用文献Structural mechanism of protein recognition by the FW domain of autophagy receptor Nbr1
Nat Commun, 13, 2022
5GIP
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BU of 5gip by Molmil
Crystal structure of box C/D RNP with 13 nt guide regions and 11 nt substrates
分子名称: 50S ribosomal protein L7Ae, C/D RNA, C/D box methylation guide ribonucleoprotein complex aNOP56 subunit, ...
著者Yang, Z, Lin, J, Ye, K.
登録日2016-06-24
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.129 Å)
主引用文献Box C/D guide RNAs recognize a maximum of 10 nt of substrates
Proc.Natl.Acad.Sci.USA, 113, 2016
5GIO
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BU of 5gio by Molmil
Crystal structure of box C/D RNP with 12 nt guide regions and 13 nt substrates
分子名称: 50S ribosomal protein L7Ae, C/D RNA, C/D box methylation guide ribonucleoprotein complex aNOP56 subunit, ...
著者Yang, Z, Lin, J, Ye, K.
登録日2016-06-24
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.604 Å)
主引用文献Box C/D guide RNAs recognize a maximum of 10 nt of substrates
Proc.Natl.Acad.Sci.USA, 113, 2016
5GIN
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BU of 5gin by Molmil
Crystal structure of box C/D RNP with 12 nt guide regions and 9 nt substrates
分子名称: 50S ribosomal protein L7Ae, C/D RNA, C/D box methylation guide ribonucleoprotein complex aNOP56 subunit, ...
著者Yang, Z, Lin, J, Ye, K.
登録日2016-06-24
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.308 Å)
主引用文献Box C/D guide RNAs recognize a maximum of 10 nt of substrates
Proc.Natl.Acad.Sci.USA, 113, 2016
4ZLK
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BU of 4zlk by Molmil
Crystal structure of mouse myosin-5a in complex with calcium-bound calmodulin
分子名称: CALCIUM ION, Calmodulin, Unconventional myosin-Va
著者Shen, M, Zhang, N, Zheng, S, Zhang, W.-B, Zhang, H.-M, Lu, Z, Su, Q.P, Sun, Y, Ye, K, Li, X.-D.
登録日2015-05-01
公開日2016-05-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Structural basis for calcium regulation of myosin 5 motor function
To Be Published
5IC7
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BU of 5ic7 by Molmil
Structure of the WD domain of UTP18
分子名称: Putative uncharacterized protein, SULFATE ION
著者Zhang, C, Ye, K.
登録日2016-02-22
公開日2016-07-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.331 Å)
主引用文献Integrative structural analysis of the UTPB complex, an early assembly factor for eukaryotic small ribosomal subunits
Nucleic Acids Res., 44, 2016
5ICA
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BU of 5ica by Molmil
Structure of the CTD complex of UTP12, Utp13, Utp1 and Utp21
分子名称: Periodic tryptophan protein 2-like protein, Putative U3 snoRNP protein, Putative uncharacterized protein
著者Zhang, C, Ye, K.
登録日2016-02-23
公開日2016-07-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.507 Å)
主引用文献Integrative structural analysis of the UTPB complex, an early assembly factor for eukaryotic small ribosomal subunits
Nucleic Acids Res., 44, 2016
5IC9
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BU of 5ic9 by Molmil
Structure of the CTD complex of Utp12 and Utp13
分子名称: Putative uncharacterized protein
著者Zhang, C, Ye, K.
登録日2016-02-23
公開日2016-07-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Integrative structural analysis of the UTPB complex, an early assembly factor for eukaryotic small ribosomal subunits
Nucleic Acids Res., 44, 2016
5IC8
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BU of 5ic8 by Molmil
Structure of UTP6
分子名称: Putative uncharacterized protein
著者Zhang, C, Ye, K.
登録日2016-02-23
公開日2016-07-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Integrative structural analysis of the UTPB complex, an early assembly factor for eukaryotic small ribosomal subunits
Nucleic Acids Res., 44, 2016
7DDE
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BU of 7dde by Molmil
Cryo-EM structure of the Ape4 and Nbr1 complex
分子名称: Aspartyl aminopeptidase 1,ZZ-type zinc finger-containing protein P35G2.11c,Maltose/maltodextrin-binding periplasmic protein, ZINC ION
著者Zhang, J, Ye, K.
登録日2020-10-28
公開日2021-07-14
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.26 Å)
主引用文献Molecular and structural mechanisms of ZZ domain-mediated cargo selection by Nbr1.
Embo J., 40, 2021
7DD9
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BU of 7dd9 by Molmil
Cryo-EM structure of the Ams1 and Nbr1 complex
分子名称: Alpha-mannosidase,ZZ-type zinc finger-containing protein P35G2.11c,Maltose/maltodextrin-binding periplasmic protein, ZINC ION
著者Zhang, J, Ye, K.
登録日2020-10-28
公開日2021-07-14
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Molecular and structural mechanisms of ZZ domain-mediated cargo selection by Nbr1.
Embo J., 40, 2021
4DOZ
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BU of 4doz by Molmil
Crystal structure of Pyrococcus furiosus Cmr2 (Cas10)
分子名称: Putative uncharacterized protein, ZINC ION
著者Zhu, X, Ye, K.
登録日2012-02-12
公開日2012-03-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal structure of Cmr2 suggests a nucleotide cyclase-related enzyme in type III CRISPR-Cas systems
Febs Lett., 586, 2012
4DJG
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BU of 4djg by Molmil
Crystal structure of the coiled-coil 1 domain of actin-binding protein SCAB1
分子名称: Plectin-related protein
著者Zhang, W, Ye, K.
登録日2012-02-01
公開日2012-02-29
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Plant actin-binding protein SCAB1 is dimeric actin cross-linker with atypical pleckstrin homology domain
J.Biol.Chem., 287, 2012
4DIX
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BU of 4dix by Molmil
Crystal structure of the Ig-PH domain of actin-binding protein SCAB1
分子名称: MALONATE ION, Plectin-related protein
著者Zhang, W, Ye, K.
登録日2012-02-01
公開日2012-02-29
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Plant actin-binding protein SCAB1 is dimeric actin cross-linker with atypical pleckstrin homology domain
J.Biol.Chem., 287, 2012
3UNM
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BU of 3unm by Molmil
Crystal Structure of The Human MDC1 FHA Domain
分子名称: Mediator of DNA damage checkpoint protein 1
著者Luo, S, Ye, K.
登録日2011-11-16
公開日2012-01-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural mechanism of the phosphorylation-dependent dimerization of the MDC1 forkhead-associated domain
Nucleic Acids Res., 40, 2012
3UNN
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BU of 3unn by Molmil
Monomeric structure of the human MDC1 FHA domain in complex with an MDC1 phospho-T4 peptide
分子名称: Mediator of DNA damage checkpoint protein 1, phospho-T4 peptide from Mediator of DNA damage checkpoint protein 1
著者Luo, S, Ye, K.
登録日2011-11-16
公開日2012-01-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural mechanism of the phosphorylation-dependent dimerization of the MDC1 forkhead-associated domain
Nucleic Acids Res., 40, 2012
3UV0
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BU of 3uv0 by Molmil
Crystal structure of the drosophila MU2 FHA domain
分子名称: Mutator 2, isoform B
著者Luo, S, Ye, K.
登録日2011-11-29
公開日2012-01-25
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Dimerization, but not phosphothreonine binding, is conserved between the forkhead-associated domains of Drosophila MU2 and human MDC1
Febs Lett., 586, 2012
2L83
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BU of 2l83 by Molmil
A protein from Haloferax volcanii
分子名称: Small archaeal modifier protein 1
著者Zhang, W, Liao, S, Fan, K, Tu, X.
登録日2011-01-03
公開日2012-01-11
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Ionic strength-dependent conformations of a ubiquitin-like small archaeal modifier protein (SAMP1) from Haloferax volcanii.
Protein Sci., 22, 2013
4NOJ
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BU of 4noj by Molmil
Crystal structure of the mature form of asparaginyl endopeptidase (AEP)/Legumain activated at pH 3.5
分子名称: Legumain
著者Zhao, L, Hua, T, Ru, H, Ni, X, Shaw, N, Jiao, L, Ding, W, Qu, L, Ouyang, S, Liu, Z.J.
登録日2013-11-19
公開日2014-02-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural analysis of asparaginyl endopeptidase reveals the activation mechanism and a reversible intermediate maturation stage.
Cell Res., 24, 2014
4NOL
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BU of 4nol by Molmil
Crystal structure of proenzyme asparaginyl endopeptidase (AEP)/Legumain mutant D233A at pH 7.5
分子名称: Legumain
著者Zhao, L, Hua, T, Ru, H, Ni, X, Shaw, N, Jiao, L, Ding, W, Qu, L, Ouyang, S, Liu, Z.J.
登録日2013-11-19
公開日2014-02-19
最終更新日2014-03-19
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural analysis of asparaginyl endopeptidase reveals the activation mechanism and a reversible intermediate maturation stage.
Cell Res., 24, 2014
4GWK
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BU of 4gwk by Molmil
Crystal structure of 6-phosphogluconate dehydrogenase complexed with 3-phosphoglyceric acid
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-PHOSPHOGLYCERIC ACID, 6-phosphogluconate dehydrogenase, ...
著者He, C, Zhou, L, Zhang, L.
登録日2012-09-03
公開日2012-11-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.534 Å)
主引用文献Phosphoglycerate mutase 1 coordinates glycolysis and biosynthesis to promote tumor growth.
Cancer Cell, 22, 2012

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