Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8FOW
DownloadVisualize
BU of 8fow by Molmil
Ternary complex of CDK2 with small molecule ligands TW8672 and Dinaciclib
分子名称: 1,2-ETHANEDIOL, 2-{[2-(1H-indol-3-yl)ethyl]amino}-5-nitrobenzoic acid, 3-[({3-ethyl-5-[(2S)-2-(2-hydroxyethyl)piperidin-1-yl]pyrazolo[1,5-a]pyrimidin-7-yl}amino)methyl]-1-hydroxypyridinium, ...
著者Schonbrunn, E, Sun, L.
登録日2023-01-03
公開日2023-05-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Development of allosteric and selective CDK2 inhibitors for contraception with negative cooperativity to cyclin binding.
Nat Commun, 14, 2023
9F5K
DownloadVisualize
BU of 9f5k by Molmil
UP1 in complex with Z33546965
分子名称: Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed, ~{N}-(2-azanyl-2-oxidanylidene-ethyl)-4-methoxy-benzamide
著者Dunnett, L, Prischi, F.
登録日2024-04-29
公開日2024-05-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Enhanced identification of small molecules binding to hnRNP A1 via in silico hotspot and cryptic pockets mapping coupled with X-Ray fragment screening
To Be Published
9F5G
DownloadVisualize
BU of 9f5g by Molmil
UP1 in complex with EN300-115958
分子名称: 1-[(2R)-1-(methanesulfonyl)pyrrolidin-2-yl]methanamine, Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed
著者Dunnett, L, Prischi, F.
登録日2024-04-28
公開日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Enhanced identification of small molecules binding to hnRNP A1 via in silico hotspot and cryptic pockets mapping coupled with X-Ray fragment screening
To Be Published
8UWS
DownloadVisualize
BU of 8uws by Molmil
Cryo-EM structure of an Enterobacter GH43 Beta-Xylosidase: EcXyl43
分子名称: Beta-xylosidase, CALCIUM ION
著者Briganti, L, Godoy, A.S, Capetti, C.C.M, Portugal, R.V, Polikarpov, I.
登録日2023-11-08
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (2.65 Å)
主引用文献Cryo-EM structure of an Enterobacter GH43 Beta-Xylosidase: EcXyl43
To Be Published
8WNW
DownloadVisualize
BU of 8wnw by Molmil
the structure of PsaQ
分子名称: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, CHLOROPHYLL A, PsaQ
著者Zhang, S.M, Si, L, Li, M.
登録日2023-10-06
公開日2024-05-29
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Growth phase-dependent reorganization of cryptophyte photosystem I antennae.
Commun Biol, 7, 2024
8VZ9
DownloadVisualize
BU of 8vz9 by Molmil
Crystal structure of mouse MAIT M2A TCR-MR1-5-OP-RU complex
分子名称: 1-deoxy-1-({2,6-dioxo-5-[(E)-propylideneamino]-1,2,3,6-tetrahydropyrimidin-4-yl}amino)-D-ribitol, Beta-2-microglobulin, GLYCEROL, ...
著者Ciacchi, L, Rossjohn, J, Awad, W.
登録日2024-02-11
公開日2024-04-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Mouse mucosal-associated invariant T cell receptor recognition of MR1 presenting the vitamin B metabolite, 5-(2-oxopropylideneamino)-6-d-ribitylaminouracil.
J.Biol.Chem., 300, 2024
8X7X
DownloadVisualize
BU of 8x7x by Molmil
Crystal structure of SADS-CoV fusion core
分子名称: CHLORIDE ION, HR1, HR2
著者Yan, L.
登録日2023-11-26
公開日2024-02-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Crystal Structures of Fusion Cores from CCoV-HuPn-2018 and SADS-CoV.
Viruses, 16, 2024
8WMG
DownloadVisualize
BU of 8wmg by Molmil
Structure of ConA/Man3
分子名称: 4-[3,5-bis(4-carboxyphenyl)phenyl]benzoic acid, CALCIUM ION, Concanavalin-A, ...
著者Li, L, Chen, G.
登録日2023-10-03
公開日2023-12-06
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Rational design of inducing ligands with three-dimensional supramolecular interactions to build protein crystalline frameworks.
To Be Published
9F4Z
DownloadVisualize
BU of 9f4z by Molmil
UP1 in complex with Z57040482
分子名称: Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed, N-(2-hydroxyphenyl)acetamide
著者Dunnett, L, Prischi, F.
登録日2024-04-28
公開日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Enhanced identification of small molecules binding to hnRNP A1 via in silico hotspot and cryptic pockets mapping coupled with X-Ray fragment screening
To Be Published
8WEJ
DownloadVisualize
BU of 8wej by Molmil
Structure of human phagocyte NADPH oxidase in the activated state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 7D5 Fab heavy chain, 7D5 Fab light chain, ...
著者Chen, L, Liu, X.
登録日2023-09-18
公開日2024-01-24
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Structure of human phagocyte NADPH oxidase in the activated state.
Nature, 627, 2024
8W6C
DownloadVisualize
BU of 8w6c by Molmil
CryoEM structure of NaDC1 with Citrate
分子名称: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, CHOLESTEROL HEMISUCCINATE, CITRIC ACID, ...
著者Chi, X, Chen, Y, Li, Y, Dai, L, Zhang, Y, Shen, Y, Chen, Y, Shi, T, Yang, H, Wang, Z, Yan, R.
登録日2023-08-28
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Cryo-EM structures of the human NaS1 and NaDC1 transporters revealed the elevator transport and allosteric regulation mechanism.
Sci Adv, 10, 2024
5E6Z
DownloadVisualize
BU of 5e6z by Molmil
Crystal structure of Ecoli Branching Enzyme with beta cyclodextrin
分子名称: 1,4-alpha-glucan branching enzyme GlgB, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), GLYCEROL
著者Feng, L, Nosrati, M, Geiger, J.H.
登録日2015-10-11
公開日2015-12-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.878 Å)
主引用文献Crystal structures of Escherichia coli branching enzyme in complex with cyclodextrins.
Acta Crystallogr D Struct Biol, 72, 2016
8Z9R
DownloadVisualize
BU of 8z9r by Molmil
Cryo-EM structure of Thogoto virus polymerase in a replication elongation-reception conformation
分子名称: Polymerase acidic protein, Polymerase basic protein 2, RNA (5'-D(*(ATP))-R(P*GP*CP*AP*AP*AP*AP*AP*CP*A)-3'), ...
著者Xue, L, Chang, T, Li, Z, Zhao, H, Li, M, He, J, Chen, X, Xiong, X.
登録日2024-04-23
公開日2024-05-29
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.58 Å)
主引用文献Cryo-EM structures of Thogoto virus polymerase reveal unique RNA transcription and replication mechanisms among orthomyxoviruses.
Nat Commun, 15, 2024
8VL7
DownloadVisualize
BU of 8vl7 by Molmil
Co-crystal structure of human TREX1 in complex with an inhibitor
分子名称: (2P)-2-[3-bromo-2-(2-hydroxyethoxy)phenyl]-5-hydroxy-1-methyl-N-(1,2-oxazol-4-yl)-6-oxo-1,6-dihydropyrimidine-4-carboxamide, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Dehghani-Tafti, S, Dong, A, Li, Y, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L.
登録日2024-01-11
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Co-crystal structure of human TREX1 in complex with an inhibitor
To be published
8Y6P
DownloadVisualize
BU of 8y6p by Molmil
Structure of the auto-inhibited Dark monomer
分子名称: Apaf-1 related killer DARK
著者Tian, L, Li, Y, Shi, Y.
登録日2024-02-03
公開日2024-04-10
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Dark and Dronc activation in Drosophila melanogaster.
Proc.Natl.Acad.Sci.USA, 121, 2024
7NQG
DownloadVisualize
BU of 7nqg by Molmil
The structure of the SBP TarP_Rhp in complex with 4-hydroxyphenylacetate
分子名称: 1,2-ETHANEDIOL, 4-HYDROXYPHENYLACETATE, PHOSPHATE ION, ...
著者Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
登録日2021-03-01
公開日2021-10-06
最終更新日2022-01-26
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
8W6K
DownloadVisualize
BU of 8w6k by Molmil
in situ room temperature Laue crystallography
分子名称: Lysozyme C
著者Wang, Z.J, Wang, S.S, Pan, Q.Y, Yu, L, Su, Z.H, Yang, T.Y, Wang, Y.Z, Zhang, W.Z, Hao, Q, Gao, X.Y.
登録日2023-08-29
公開日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献BL03HB: Laue crystallography beamline at SSRF
To Be Published
8Z50
DownloadVisualize
BU of 8z50 by Molmil
Crystal structure of the ASF1-H3T-H4 complex
分子名称: Histone H3.1t, Histone H4, Histone chaperone ASF1A
著者Xu, L.
登録日2024-04-18
公開日2024-07-03
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into instability of the nucleosome driven by histone variant H3T.
Biochem.Biophys.Res.Commun., 727, 2024
8VKT
DownloadVisualize
BU of 8vkt by Molmil
Crystallographic structure of dimetalated DapE from Enterococcus faecium
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Probable succinyl-diaminopimelate desuccinylase, ...
著者Gonzalez-Segura, L, Diaz-Vilchis, A, Terrazas-Lopez, M, Diaz-Sanchez, A.G.
登録日2024-01-09
公開日2024-05-29
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.398 Å)
主引用文献The three-dimensional structure of DapE from Enterococcus faecium reveals new insights into DapE/ArgE subfamily ligand specificity.
Int.J.Biol.Macromol., 270, 2024
8WNS
DownloadVisualize
BU of 8wns by Molmil
Cryo EM map of SLC7A10 in the apo state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Amino acid transporter heavy chain SLC3A2, Asc-type amino acid transporter 1
著者Li, Y.N, Guo, Y.Y, Dai, L, Yan, R.H.
登録日2023-10-06
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Cryo-EM structure of the human Asc-1 transporter complex.
Nat Commun, 15, 2024
9BBG
DownloadVisualize
BU of 9bbg by Molmil
Co-crystal structure of human DDB1 bound to fragment UB028671
分子名称: 1,2-ETHANEDIOL, 1H-indol-6-amine, DNA damage-binding protein 1, ...
著者Zeng, H, Dong, A, Frommlet, A, Seitova, A, Loppnau, P, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2024-04-05
公開日2024-06-12
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Co-crystal structure of human DDB1 bound to fragment UB028671
To be published
5DP6
DownloadVisualize
BU of 5dp6 by Molmil
Crystal Structure of EV71 3C Proteinase in complex with compound 7
分子名称: 3C proteinase, ethyl (2Z,4S)-4-{[N-(3-cyclopropylpropanoyl)-L-phenylalanyl]amino}-5-[(3S)-2-oxopyrrolidin-3-yl]pent-2-enoate
著者Wu, C, Zhang, L, Li, P, Cai, Q, Peng, X, Li, N, Cai, Y, Li, J, Lin, T.
登録日2015-09-12
公開日2016-03-30
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Fragment-wise design of inhibitors to 3C proteinase from enterovirus 71
Biochim.Biophys.Acta, 1860, 2016
9ASB
DownloadVisualize
BU of 9asb by Molmil
Structure of human calcium-sensing receptor in complex with chimeric Gq (miniGisq) protein in nanodiscs
分子名称: (19R,22S,25R)-22,25,26-trihydroxy-16,22-dioxo-17,21,23-trioxa-22lambda~5~-phosphahexacosan-19-yl (9Z)-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zuo, H, Park, J, Frangaj, A, Ye, J, Lu, G, Manning, J.J, Asher, W.B, Lu, Z, Hu, G, Wang, L, Mendez, J, Eng, E, Zhang, Z, Lin, X, Grasucci, R, Hendrickson, W.A, Clarke, O.B, Javitch, J.A, Conigrave, A.D, Fan, Q.R.
登録日2024-02-24
公開日2024-04-17
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Promiscuous G-protein activation by the calcium-sensing receptor.
Nature, 629, 2024
5L8A
DownloadVisualize
BU of 5l8a by Molmil
Targeting the PEX14-PEX5 interaction by small molecules provides novel therapeutic routes to treat trypanosomiases.
分子名称: 1,2-ETHANEDIOL, 1-(2-hydroxyethyl)-5-[(4-methoxynaphthalen-1-yl)methyl]-~{N}-(phenylmethyl)-6,7-dihydro-4~{H}-pyrazolo[4,3-c]pyridine-3-carboxamide, GLYCINE, ...
著者Dawidowski, M, Emmanouilidis, L, Sattler, M, Popowicz, G.M.
登録日2016-06-07
公開日2017-03-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Inhibitors of PEX14 disrupt protein import into glycosomes and kill Trypanosoma parasites.
Science, 355, 2017
8Z8N
DownloadVisualize
BU of 8z8n by Molmil
Cryo-EM structure of Thogoto virus polymerase in transcription pre-initiation conformation 3
分子名称: Polymerase acidic protein, Polymerase basic protein 2, RNA (5'-R(*AP*GP*AP*GP*AP*AP*AP*UP*CP*AP*AP*GP*GP*CP*AP*GP*UP*U)-3'), ...
著者Xue, L, Chang, T, Li, Z, Zhao, H, Li, M, He, J, Chen, X, Xiong, X.
登録日2024-04-22
公開日2024-05-29
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Cryo-EM structures of Thogoto virus polymerase reveal unique RNA transcription and replication mechanisms among orthomyxoviruses.
Nat Commun, 15, 2024

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon