Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5CBU
DownloadVisualize
BU of 5cbu by Molmil
Human Cyclophilin D Complexed with Inhibitor.
分子名称: 1,2-ETHANEDIOL, POTASSIUM ION, Peptidyl-prolyl cis-trans isomerase F, ...
著者Gibson, R.P, Shore, E, Kershaw, N, Awais, M, Javed, A, Latawiec, D, Pandalaneni, S, Wen, L, Berry, N, O'Neill, P, Sutton, R, Lian, L.Y.
登録日2015-07-01
公開日2016-07-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Human Cyclophilin D Complexed with Inhibitor.
To Be Published
6H2B
DownloadVisualize
BU of 6h2b by Molmil
Structure of the Macrobrachium rosenbergii Nodavirus
分子名称: CALCIUM ION, Capsid protein
著者Ho, K.H, Gabrielsen, M, Beh, P.L, Kueh, C.L, Thong, Q.X, Streetley, J, Tan, W.S, Bhella, D.
登録日2018-07-13
公開日2018-10-31
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献Structure of the Macrobrachium rosenbergii nodavirus: A new genus within the Nodaviridae?
PLoS Biol., 16, 2018
5CC9
DownloadVisualize
BU of 5cc9 by Molmil
L28F E.coli dihydrofolate reductase complexed with 5,10-dideazatetrahydrofolate and oxidized nicotinamide adenine dinucleotide phosphate
分子名称: 5,10-DIDEAZATETRAHYDROFOLIC ACID, Dihydrofolate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Oyen, D, Wright, P.E.
登録日2015-07-01
公開日2015-08-05
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.199 Å)
主引用文献Cofactor-Mediated Conformational Dynamics Promote Product Release From Escherichia coli Dihydrofolate Reductase via an Allosteric Pathway.
J.Am.Chem.Soc., 137, 2015
5C79
DownloadVisualize
BU of 5c79 by Molmil
PH domain of ASAP1 in complex with diC4-PtdIns(4,5)P2
分子名称: (2R)-3-{[(R)-HYDROXY{[(1R,2R,3S,4R,5R,6S)-2,3,6-TRIHYDROXY-4,5-BIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL]OXY}PROPANE-1 ,2-DIYL DIBUTANOATE, Arf-GAP, CHLORIDE ION
著者Xia, D, Tang, W.K.
登録日2015-06-24
公開日2015-10-07
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Molecular Basis for Cooperative Binding of Anionic Phospholipids to the PH Domain of the Arf GAP ASAP1.
Structure, 23, 2015
6YLA
DownloadVisualize
BU of 6yla by Molmil
Crystal structure of the SARS-CoV-2 receptor binding domain in complex with CR3022 Fab
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
著者Huo, J, Zhao, Y, Ren, J, Zhou, D, Ginn, H.M, Fry, E.E, Owens, R, Stuart, D.I.
登録日2020-04-06
公開日2020-04-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Neutralization of SARS-CoV-2 by Destruction of the Prefusion Spike.
Cell Host Microbe, 28, 2020
6YQ1
DownloadVisualize
BU of 6yq1 by Molmil
FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH N-Methyl-N-(3-{[2-(2-oxo-1,2,3,4-tetrahydro-quinolin-6-ylamino)-5-trifluoromethyl-pyrimidin-4-ylamino]-methyl}-pyridin-2-yl)-methanesulfonamide
分子名称: Focal adhesion kinase 1, SODIUM ION, SULFATE ION, ...
著者Musil, D, Heinrich, T, Amaral, M.
登録日2020-04-16
公開日2021-02-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.784 Å)
主引用文献Structure-kinetic relationship reveals the mechanism of selectivity of FAK inhibitors over PYK2.
Cell Chem Biol, 28, 2021
6YR9
DownloadVisualize
BU of 6yr9 by Molmil
FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH N-Methyl-N-(2-{[2-(2-oxo-2,3-dihydro-1H-indol-5-ylamino)-5-trifluoromethyl-pyrimidin-4-ylamino]-methyl}-phenyl)-methanesulfonamide
分子名称: Focal adhesion kinase 1, N-Methyl-N-(2-{[2-(2-oxo-2,3-dihydro-1H-indol-5-ylamino)-5-trifluoromethyl-pyrimidin-4-ylamino]-methyl}-phenyl)-methanesulfonamide
著者Musil, D, Amaral, M.
登録日2020-04-19
公開日2021-02-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.925 Å)
主引用文献Structure-kinetic relationship reveals the mechanism of selectivity of FAK inhibitors over PYK2.
Cell Chem Biol, 28, 2021
6GP3
DownloadVisualize
BU of 6gp3 by Molmil
Ribonucleotide Reductase class Ie R2 from Mesoplasma florum, inactive form
分子名称: CALCIUM ION, Ribonucleoside-diphosphate reductase beta chain
著者Srinivas, V, Lebrette, H, Lundin, D, Kutin, Y, Sahlin, M, Lerche, M, Enrich, J, Branca, R.M.M, Cox, N, Sjoberg, B.M, Hogbom, M.
登録日2018-06-05
公開日2018-08-22
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Metal-free ribonucleotide reduction powered by a DOPA radical in Mycoplasma pathogens.
Nature, 563, 2018
6YOJ
DownloadVisualize
BU of 6yoj by Molmil
FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH 6-[4-(3-Methanesulfonyl-benzylamino)-5-trifluoromethyl-pyrimidin-2-ylamino]-3,4-dihydro-1H-quinolin-2-one
分子名称: 6-[[4-[(3-methylsulfonylphenyl)methylamino]-5-(trifluoromethyl)pyrimidin-2-yl]amino]-3,4-dihydro-1~{H}-quinolin-2-one, Focal adhesion kinase 1
著者Musil, D, Heinrich, T.
登録日2020-04-14
公開日2021-02-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.361 Å)
主引用文献Structure-kinetic relationship reveals the mechanism of selectivity of FAK inhibitors over PYK2.
Cell Chem Biol, 28, 2021
1GNU
DownloadVisualize
BU of 1gnu by Molmil
GABA(A) receptor associated protein GABARAP
分子名称: GABARAP, NICKEL (II) ION
著者Knight, D, Harris, R, Moss, S, Driscoll, P.C, Keep, N.H.
登録日2001-10-09
公開日2001-12-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The X-Ray Crystal Structure and Putative Ligand-Derived Peptide Binding Properties of Gamma-Aminobutyric Acid Receptor Type a Receptor-Associated Protein
J.Biol.Chem., 277, 2002
6YK8
DownloadVisualize
BU of 6yk8 by Molmil
OTU-like deubiquitinase from Legionella -Lpg2529
分子名称: PLATINUM (II) ION, Uncharacterized protein
著者Shin, D, Dikic, I.
登録日2020-04-05
公開日2021-02-10
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Bacterial OTU deubiquitinases regulate substrate ubiquitination upon Legionella infection.
Elife, 9, 2020
6GSH
DownloadVisualize
BU of 6gsh by Molmil
Feline Calicivirus Strain F9
分子名称: POTASSIUM ION, VP1
著者Conley, M.J, Bhella, D.
登録日2018-06-14
公開日2019-01-16
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Calicivirus VP2 forms a portal-like assembly following receptor engagement.
Nature, 565, 2019
5C3H
DownloadVisualize
BU of 5c3h by Molmil
Fragment-Based Drug Discovery Targeting Inhibitor of Apoptosis Proteins: Compound 1
分子名称: 4-[2-oxo-2-(piperidin-1-yl)ethyl]piperazin-1-ium, E3 ubiquitin-protein ligase XIAP, ZINC ION
著者Chessari, G, Buck, I.M, Day, J.E.H, Day, P.J, Iqbal, A, Johnson, C.N, Lewis, E.J, Martins, V, Miller, D, Reader, M, Rees, D.C, Rich, S.J, Tamanini, E, Vitorino, M, Ward, G.A, Williams, P.A, Williams, G, Wilsher, N.E, Woolford, A.J.-A.
登録日2015-06-17
公開日2015-08-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Fragment-Based Drug Discovery Targeting Inhibitor of Apoptosis Proteins: Discovery of a Non-Alanine Lead Series with Dual Activity Against cIAP1 and XIAP.
J.Med.Chem., 58, 2015
6GTP
DownloadVisualize
BU of 6gtp by Molmil
Structure of the AtaT Y144F mutant toxin
分子名称: ACETYL COENZYME *A, CHLORIDE ION, MAGNESIUM ION, ...
著者Garcia-Pino, A, Jurenas, D.
登録日2018-06-18
公開日2019-03-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mechanism of regulation and neutralization of the AtaR-AtaT toxin-antitoxin system.
Nat. Chem. Biol., 15, 2019
5C3L
DownloadVisualize
BU of 5c3l by Molmil
Structure of the metazoan Nup62.Nup58.Nup54 nucleoporin complex.
分子名称: Nanobody Nb15, Nucleoporin Nup58, Nucleoporin Nup62, ...
著者Chug, H, Trakhanov, S, Hulsmann, B.B, Pleiner, T, Gorlich, D.
登録日2015-06-17
公開日2015-08-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of the metazoan Nup62Nup58Nup54 nucleoporin complex.
Science, 350, 2015
6GVE
DownloadVisualize
BU of 6gve by Molmil
GAPDH-CP12-PRK complex
分子名称: CP12 polypeptide, Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者McFarlane, C.R, Shah, N, Bubeck, D, Murray, J.W.
登録日2018-06-20
公開日2019-07-03
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural basis of light-induced redox regulation in the Calvin-Benson cycle in cyanobacteria.
Proc.Natl.Acad.Sci.USA, 116, 2019
4I8B
DownloadVisualize
BU of 4i8b by Molmil
Crystal Structure of Thioredoxin from Schistosoma Japonicum
分子名称: Thioredoxin
著者Wu, Q, Peng, Y, Zhao, J, Li, X, Fan, X, Zhou, X, Chen, J, Luo, Z, Shi, D.
登録日2012-12-03
公開日2013-12-04
最終更新日2015-06-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Expression, characterization and crystal structure of thioredoxin from Schistosoma japonicum.
Parasitology, 142, 2015
5C7A
DownloadVisualize
BU of 5c7a by Molmil
Fragment-Based Drug Discovery Targeting Inhibitor of Apoptosis Proteins: Compound 7
分子名称: (2R)-4-[2-(2,3-dihydro-1H-indol-1-yl)-2-oxoethyl]-2-methylpiperazin-1-ium, E3 ubiquitin-protein ligase XIAP, ZINC ION
著者Chessari, G, Buck, I.M, Day, J.E.H, Day, P.J, Iqbal, A, Johnson, C.N, Lewis, E.J, Martins, V, Miller, D, Reader, M, Rees, D.C, Rich, S.J, Tamanini, E, Vitorino, M, Ward, G.A, Williams, P.A, Williams, G, Wilsher, N.E, Woolford, A.J.-A.
登録日2015-06-24
公開日2015-08-12
最終更新日2015-09-09
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Fragment-Based Drug Discovery Targeting Inhibitor of Apoptosis Proteins: Discovery of a Non-Alanine Lead Series with Dual Activity Against cIAP1 and XIAP.
J.Med.Chem., 58, 2015
5CBT
DownloadVisualize
BU of 5cbt by Molmil
Human Cyclophilin D Complexed with Inhibitor
分子名称: 1,2-ETHANEDIOL, FORMIC ACID, POTASSIUM ION, ...
著者Gibson, R.P, Shore, E, Kershaw, N, Awais, M, Javed, A, Latawiec, D, Pandalaneni, S, Wen, L, Berry, N, O'Neill, P, Sutton, R, Lian, L.Y.
登録日2015-07-01
公開日2016-07-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Human Cyclophilin D Complexed with Inhibitor
To Be Published
6H0R
DownloadVisualize
BU of 6h0r by Molmil
X-ray structure of SRS2 fragment of Rgs4 3' UTR
分子名称: BARIUM ION, MAGNESIUM ION, SRS2 fragment of Rgs4 3' UTR, ...
著者Heber, S, Janowski, R, Niessing, D.
登録日2018-07-10
公開日2019-04-17
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Staufen2-mediated RNA recognition and localization requires combinatorial action of multiple domains.
Nat Commun, 10, 2019
6H55
DownloadVisualize
BU of 6h55 by Molmil
core of the human pyruvate dehydrogenase (E2)
分子名称: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial
著者Haselbach, D, Prajapati, S, Tittmann, K, Stark, H.
登録日2018-07-23
公開日2019-06-05
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献Structural and Functional Analyses of the Human PDH Complex Suggest a "Division-of-Labor" Mechanism by Local E1 and E3 Clusters.
Structure, 27, 2019
6H1T
DownloadVisualize
BU of 6h1t by Molmil
Structure of the BM3 heme domain in complex with clotrimazole
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 1-[(2-CHLOROPHENYL)(DIPHENYL)METHYL]-1H-IMIDAZOLE, ...
著者Jeffreys, L.N, Munro, A.W.M, Leys, D.
登録日2018-07-12
公開日2019-02-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Novel insights into P450 BM3 interactions with FDA-approved antifungal azole drugs.
Sci Rep, 9, 2019
6H5S
DownloadVisualize
BU of 6h5s by Molmil
Cryo-EM map of in vitro assembled Measles virus N into nucleocapsid-like particles (NCLPs) bound to viral genomic 5-prime RNA hexamers.
分子名称: Nucleocapsid, RNA (5'-R(*AP*CP*CP*AP*GP*A)-3')
著者Desfosses, A, Milles, S, Ringkjobing Jensen, M, Guseva, S, Colletier, J.P, Maurin, D, Schoehn, G, Gutsche, I, Ruigrok, R, Blackledge, M.
登録日2018-07-25
公開日2019-06-12
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Assembly and cryo-EM structures of RNA-specific measles virus nucleocapsids provide mechanistic insight into paramyxoviral replication.
Proc.Natl.Acad.Sci.USA, 116, 2019
5BZ3
DownloadVisualize
BU of 5bz3 by Molmil
CRYSTAL STRUCTURE OF SODIUM PROTON ANTIPORTER NAPA IN OUTWARD-FACING CONFORMATION.
分子名称: (2R)-2,3-DIHYDROXYPROPYL (7Z)-TETRADEC-7-ENOATE, Na(+)/H(+) antiporter
著者Coincon, M, Uzdavinys, P, Emmanuel, N, Cameron, A, Drew, D.
登録日2015-06-11
公開日2016-01-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures reveal the molecular basis of ion translocation in sodium/proton antiporters.
Nat.Struct.Mol.Biol., 23, 2016
5C2U
DownloadVisualize
BU of 5c2u by Molmil
Ferredoxin-like domain of nucleoporin Nup54 bound to a nanobody
分子名称: Nanobody, Nup54
著者Chug, H, Trakhanov, S, Hulsmann, B.B, Pleiner, T, Gorlich, D.
登録日2015-06-16
公開日2015-08-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of the metazoan Nup62Nup58Nup54 nucleoporin complex.
Science, 350, 2015

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon