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7NNX
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BU of 7nnx by Molmil
E. coli NfsA with 1,4-benzoquinone
分子名称: 1,2-ETHANEDIOL, 1,4-benzoquinone, CHLORIDE ION, ...
著者Day, M.D, Jarrom, D, Hyde, E.I, White, S.A.
登録日2021-02-25
公開日2021-07-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The structures of E. coli NfsA bound to the antibiotic nitrofurantoin; to 1,4-benzoquinone and to FMN.
Biochem.J., 478, 2021
7NMP
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BU of 7nmp by Molmil
E. coli NfsA with hydroquinone
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者Day, M.D, Jarrom, D, Parr, R.J, Hyde, E.I, White, S.A.
登録日2021-02-23
公開日2021-07-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The structures of E. coli NfsA bound to the antibiotic nitrofurantoin; to 1,4-benzoquinone and to FMN.
Biochem.J., 478, 2021
4PDW
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BU of 4pdw by Molmil
A benzonitrile analogue inhibits rhinovirus replication
分子名称: 4-[(4,5-dimethoxy-2-nitrophenyl)acetyl]benzonitrile, Capsid protein VP4/VP2, GLYCEROL, ...
著者Querol-Audi, J, Guerra, P, Lacroix, C, Roche, M, Franco, D, Froeyen, M, Terme, T, Vanelle, P, Neyts, J, Leyssen, P, Verdaguer, N.
登録日2014-04-22
公開日2014-07-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A novel benzonitrile analogue inhibits rhinovirus replication.
J.Antimicrob.Chemother., 69, 2014
7NDW
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BU of 7ndw by Molmil
ThyX-FADH2 soaked with 20 mM Formaldehyde
分子名称: DI(HYDROXYETHYL)ETHER, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, Flavin-dependent thymidylate synthase, ...
著者Bou-Nader, C, Pecqueur, L, Hamdane, D.
登録日2021-02-02
公開日2021-07-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献An enzymatic activation of formaldehyde for nucleotide methylation.
Nat Commun, 12, 2021
6E12
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BU of 6e12 by Molmil
Crystal Structure of the Alr8543 protein in complex with Oleic Acid and magnesium ion from Nostoc sp. PCC 7120, Northeast Structural Genomics Consortium Target NsR141
分子名称: Alr8543 protein, CHLORIDE ION, MAGNESIUM ION, ...
著者Forouhar, F, Neely, H, Seetharaman, J, Xiao, R, Ciccosanti, C, Patel, D, Belote, R.L, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2018-07-09
公開日2018-07-25
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of the Alr8543 protein in complex with Oleic Acid and magnesium ion from Nostoc sp. PCC 7120, Northeast Structural Genomics Consortium Target NsR141
To Be Published
4W2H
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BU of 4w2h by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S Ribosomal Protein S10, ...
著者Polikanov, Y.S, Osterman, I.A, Szal, T, Tashlitsky, V.N, Serebryakova, M.V, Kusochek, P, Bulkley, D, Malanicheva, I.A, Efimenko, T.A, Efremenkova, O.V, Konevega, A.L, Shaw, K.J, Bogdanov, A.A, Rodnina, M.V, Dontsova, O.A, Mankin, A.S, Steitz, T.A, Sergiev, P.V.
登録日2014-09-12
公開日2014-10-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Amicoumacin a inhibits translation by stabilizing mRNA interaction with the ribosome.
Mol.Cell, 56, 2014
4PI7
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Crystal structure of S. Aureus Autolysin E in complex with disaccharide NAM-NAG
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid, Autolysin E, CHLORIDE ION, ...
著者Mihelic, M, Renko, M, Jakas, A, Turk, D.
登録日2014-05-08
公開日2015-10-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The mechanism behind the selection of two different cleavage sites in NAG-NAM polymers
Iucrj, 4, 2017
7N9A
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BU of 7n9a by Molmil
Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting novel and conserved epitopes-CovS RBD with NB21
分子名称: Nanobody Nb21, Spike protein S1
著者Sun, D, Zhang, C, Shi, Y.
登録日2021-06-17
公開日2021-08-04
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting novel and conserved epitopes
To Be Published
4PIA
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BU of 4pia by Molmil
Crystal structure of S. Aureus Autolysin E
分子名称: Autolysin E, CHLORIDE ION
著者Mihelic, M, Renko, M, Dobersek, A, Bedrac, L, Turk, D.
登録日2014-05-08
公開日2015-10-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.466 Å)
主引用文献The mechanism behind the selection of two different cleavage sites in NAG-NAM polymers
Iucrj, 4, 2017
7NF3
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BU of 7nf3 by Molmil
Structure of A. niger Fdc T395M variant (AnFdcI) in complex with prFMN
分子名称: 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-y l)-D-ribitol, Ferulic acid decarboxylase 1, MANGANESE (II) ION, ...
著者Saaret, A, Leys, D.
登録日2021-02-05
公開日2021-08-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Directed evolution of prenylated FMN-dependent Fdc supports efficient in vivo isobutene production.
Nat Commun, 12, 2021
7N0Z
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BU of 7n0z by Molmil
Structure of PPM1H phosphatase with manganese ions at the active site
分子名称: MAGNESIUM ION, MANGANESE (II) ION, Protein phosphatase 1H
著者Khan, A.R, Waschbusch, D.
登録日2021-05-26
公開日2021-08-04
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Structural basis for the specificity of PPM1H phosphatase for Rab GTPases.
Embo Rep., 22, 2021
7NF2
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BU of 7nf2 by Molmil
Structure of T. atroviride Fdc variant TaFdcV in complex with prFMN crotonic acid adduct
分子名称: ACETATE ION, Ferulic acid decarboxylase 1, MANGANESE (II) ION, ...
著者Saaret, A, Leys, D.
登録日2021-02-05
公開日2021-08-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Directed evolution of prenylated FMN-dependent Fdc supports efficient in vivo isobutene production.
Nat Commun, 12, 2021
7NF4
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BU of 7nf4 by Molmil
Structure of A. niger Fdc T395M R435P P438W variant (AnFdcII) in complex with prFMN
分子名称: Ferulic acid decarboxylase 1, MANGANESE (II) ION, POTASSIUM ION, ...
著者Saaret, A, Leys, D.
登録日2021-02-05
公開日2021-08-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Directed evolution of prenylated FMN-dependent Fdc supports efficient in vivo isobutene production.
Nat Commun, 12, 2021
7NEY
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BU of 7ney by Molmil
Structure of T. atroviride Fdc wild-type (TaFdc) in complex with prFMN
分子名称: 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-y l)-D-ribitol, Ferulic acid decarboxylase 1, MANGANESE (II) ION, ...
著者Saaret, A, Leys, D.
登録日2021-02-05
公開日2021-08-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Directed evolution of prenylated FMN-dependent Fdc supports efficient in vivo isobutene production.
Nat Commun, 12, 2021
4PMI
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BU of 4pmi by Molmil
Crystal structure of Rev and Rev-response-element RNA complex
分子名称: PHOSPHATE ION, Protein Rev, Rev-Response-Element RNA
著者Jayaraman, B, Crosby, D.C, Homer, C, Ribeiro, I, Mavor, D, Frankel, A.D.
登録日2014-05-21
公開日2014-12-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献RNA-directed remodeling of the HIV-1 protein Rev orchestrates assembly of the Rev-Rev response element complex.
Elife, 4, 2014
7NJ1
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BU of 7nj1 by Molmil
CryoEM structure of the human Separase-Securin complex
分子名称: Securin, Separin
著者Yu, J, Raia, P, Ghent, C.M, Raisch, T, Sadian, Y, Barford, D, Raunser, S, Morgan, D.O, Boland, A.
登録日2021-02-14
公開日2021-08-04
最終更新日2021-08-18
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis of human separase regulation by securin and CDK1-cyclin B1.
Nature, 596, 2021
7NJ0
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BU of 7nj0 by Molmil
CryoEM structure of the human Separase-Cdk1-cyclin B1-Cks1 complex
分子名称: Cyclin-dependent kinase 1, Cyclin-dependent kinases regulatory subunit 1, G2/mitotic-specific cyclin-B1,G2/mitotic-specific cyclin-B1, ...
著者Yu, J, Raia, P, Ghent, C.M, Raisch, T, Sadian, Y, Barford, D, Raunser, S, Morgan, D.O, Boland, A.
登録日2021-02-14
公開日2021-08-04
最終更新日2021-08-18
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis of human separase regulation by securin and CDK1-cyclin B1.
Nature, 596, 2021
7NF0
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BU of 7nf0 by Molmil
T. atroviride Fdc variant TaFdcV in complex with hydroxylated prFMN
分子名称: ACETATE ION, Ferulic acid decarboxylase 1, MANGANESE (II) ION, ...
著者Saaret, A, Leys, D.
登録日2021-02-05
公開日2021-08-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Directed evolution of prenylated FMN-dependent Fdc supports efficient in vivo isobutene production.
Nat Commun, 12, 2021
6E5C
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BU of 6e5c by Molmil
Solution NMR structure of a de novo designed double-stranded beta-helix
分子名称: De novo beta protein
著者Marcos, E, Chidyausiku, T.M, McShan, A, Evangelidis, T, Nerli, S, Sgourakis, N, Tripsianes, K, Baker, D.
登録日2018-07-19
公開日2018-11-07
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献De novo design of a non-local beta-sheet protein with high stability and accuracy.
Nat. Struct. Mol. Biol., 25, 2018
4UW7
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BU of 4uw7 by Molmil
Structure of the carboxy-terminal domain of the bacteriophage T5 L- shaped tail fiber without its intra-molecular chaperone domain
分子名称: GLYCEROL, L-SHAPED TAIL FIBER PROTEIN
著者Garcia-Doval, C, Luque, D, Caston, J.R, Otero, J.M, Llamas-Saiz, A.L, Boulanger, P, van Raaij, M.J.
登録日2014-08-08
公開日2015-08-05
最終更新日2018-01-17
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Structure of the Receptor-Binding Carboxy-Terminal Domain of the Bacteriophage T5 L-Shaped Tail Fibre with and without Its Intra-Molecular Chaperone.
Viruses, 7, 2015
7NF1
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BU of 7nf1 by Molmil
Structure of T. atroviride variant TaFdcV in complex with prFMN-butynoic acid adduct
分子名称: Ferulic acid decarboxylase 1, MANGANESE (II) ION, POTASSIUM ION, ...
著者Saaret, A, Leys, D.
登録日2021-02-05
公開日2021-08-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Directed evolution of prenylated FMN-dependent Fdc supports efficient in vivo isobutene production.
Nat Commun, 12, 2021
6E88
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BU of 6e88 by Molmil
Cryo-EM structure of C. elegans GDP-microtubule
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, Tubulin alpha-2 chain, ...
著者Chaaban, S, Jariwala, S, Chieh-Ting, H, Redemann, S, Kollman, J, Muller-Reichert, T, Sept, D, Bui, K.H, Brouhard, G.J.
登録日2018-07-27
公開日2018-10-10
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献The Structure and Dynamics of C. elegans Tubulin Reveals the Mechanistic Basis of Microtubule Growth.
Dev. Cell, 47, 2018
6E9R
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BU of 6e9r by Molmil
DHF46 filament
分子名称: DHF46 filament
著者Lynch, E.M, Shen, H, Fallas, J.A, Kollman, J.M, Baker, D.
登録日2018-08-01
公開日2018-11-21
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (5.9 Å)
主引用文献De novo design of self-assembling helical protein filaments.
Science, 362, 2018
4PG0
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BU of 4pg0 by Molmil
Insights into Substrate and Metal Binding from the Crystal Structure of Cyanobacterial Aldehyde Deformylating Oxygenase with Substrate Bound
分子名称: (1S,2S)-2-nonylcyclopropanecarboxylic acid, Aldehyde decarbonylase, DIMETHYL SULFOXIDE, ...
著者Buer, B.C, Paul, B, Das, D, Stuckey, J.A, Marsh, E.N.G.
登録日2014-05-01
公開日2014-11-26
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Insights into substrate and metal binding from the crystal structure of cyanobacterial aldehyde deformylating oxygenase with substrate bound.
Acs Chem.Biol., 9, 2014
4PGM
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BU of 4pgm by Molmil
SACCHAROMYCES CEREVISIAE PHOSPHOGLYCERATE MUTASE
分子名称: PHOSPHOGLYCERATE MUTASE 1
著者Rigden, D.J, Alexeev, D, Phillips, S.E.V, Fothergill-Gilmore, L.A.
登録日1997-04-25
公開日1997-10-29
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The 2.3 A X-ray crystal structure of S. cerevisiae phosphoglycerate mutase.
J.Mol.Biol., 276, 1998

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