Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8WII
DownloadVisualize
BU of 8wii by Molmil
Crystal structure of E. coli ThrS catalytic domain mutant G463A in complex with Obafluorin
分子名称: Threonine--tRNA ligase, ZINC ION, ~{N}-[(2~{R},3~{S})-2-[(4-nitrophenyl)methyl]-4-oxidanylidene-oxetan-3-yl]-2,3-bis(oxidanyl)benzamide
著者Qiao, H, Wang, Z, Wang, J, Fang, P.
登録日2023-09-24
公開日2024-07-24
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Specific glycine-dependent enzyme motion determines the potency of conformation selective inhibitors of threonyl-tRNA synthetase.
Commun Biol, 7, 2024
3SJJ
DownloadVisualize
BU of 3sjj by Molmil
RB69 DNA Polymerase Triple Mutant (L561A/S565G/Y567A) Ternary Complex with dUpNpp and a Deoxy-terminated Primer in the presence of Mn2+
分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, 5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*C)-3', 5'-D(*TP*CP*AP*AP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3', ...
著者Wang, M, Wang, J, Konigsberg, W.H.
登録日2011-06-21
公開日2011-10-12
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Structural Insights into Complete Metal Ion Coordination from Ternary Complexes of B Family RB69 DNA Polymerase.
Biochemistry, 50, 2011
8WIJ
DownloadVisualize
BU of 8wij by Molmil
Crystal structure of E. coli ThrS catalytic domain mutant L489M in complex with Obafluorin
分子名称: N-(2,3-dihydroxybenzoyl)-4-(4-nitrophenyl)-L-threonine, Threonine--tRNA ligase, ZINC ION
著者Qiao, H, Wang, Z, Wang, J, Fang, P.
登録日2023-09-24
公開日2024-07-24
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Specific glycine-dependent enzyme motion determines the potency of conformation selective inhibitors of threonyl-tRNA synthetase.
Commun Biol, 7, 2024
8WIA
DownloadVisualize
BU of 8wia by Molmil
Crystal structure of E. coli ThrS catalytic domain mutant G463S
分子名称: Threonine--tRNA ligase, ZINC ION
著者Qiao, H, Wang, Z, Wang, J, Fang, P.
登録日2023-09-24
公開日2024-07-24
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Specific glycine-dependent enzyme motion determines the potency of conformation selective inhibitors of threonyl-tRNA synthetase.
Commun Biol, 7, 2024
8WIH
DownloadVisualize
BU of 8wih by Molmil
Crystal structure of E. coli ThrS catalytic domain mutant G463A in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Threonine--tRNA ligase, ZINC ION
著者Qiao, H, Wang, Z, Wang, J, Fang, P.
登録日2023-09-24
公開日2024-07-24
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Specific glycine-dependent enzyme motion determines the potency of conformation selective inhibitors of threonyl-tRNA synthetase.
Commun Biol, 7, 2024
3T9N
DownloadVisualize
BU of 3t9n by Molmil
Crystal structure of a membrane protein
分子名称: DODECYL-BETA-D-MALTOSIDE, Small-conductance mechanosensitive channel
著者Yang, M, Zhang, X, Ge, J, Wang, J.
登録日2011-08-03
公開日2012-10-31
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.456 Å)
主引用文献Structure and molecular mechanism of an anion-selective mechanosensitive channel of small conductance
Proc.Natl.Acad.Sci.USA, 109, 2012
6JVX
DownloadVisualize
BU of 6jvx by Molmil
Crystal structure of RBM38 in complex with RNA
分子名称: RNA (5'-R(*UP*GP*UP*GP*UP*GP*UP*GP*UP*GP*UP*G)-3'), RNA-binding protein 38, SULFATE ION
著者Qian, K, Li, M, Wang, J, Zhang, M, Wang, M.
登録日2019-04-17
公開日2020-01-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Structural basis for mRNA recognition by human RBM38.
Biochem.J., 477, 2020
4DNW
DownloadVisualize
BU of 4dnw by Molmil
Crystal structure of UVB-resistance protein UVR8
分子名称: AT5g63860/MGI19_6
著者Wu, D, Hu, Q, Yan, Z, Chen, W, Yan, C, Wang, J, Shi, Y.
登録日2012-02-09
公開日2012-03-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.773 Å)
主引用文献Structural basis of ultraviolet-B perception by UVR8.
Nature, 484, 2012
7JW3
DownloadVisualize
BU of 7jw3 by Molmil
Crystal structure of Aedes aegypti Nibbler NTD domain
分子名称: Exonuclease mut-7 homolog
著者Xie, W, Sowemimo, I, Hayashi, R, Wang, J, Brennecke, J, Ameres, S.L, Patel, D.J.
登録日2020-08-24
公開日2021-01-20
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structure-function analysis of microRNA 3'-end trimming by Nibbler.
Proc.Natl.Acad.Sci.USA, 117, 2020
2V5Z
DownloadVisualize
BU of 2v5z by Molmil
Structure of human MAO B in complex with the selective inhibitor safinamide
分子名称: (S)-(+)-2-[4-(FLUOROBENZYLOXY-BENZYLAMINO)PROPIONAMIDE], Amine oxidase [flavin-containing] B, FLAVIN-ADENINE DINUCLEOTIDE
著者Binda, C, Wang, J, Pisani, L, Caccia, C, Carotti, A, Salvati, P, Edmondson, D.E, Mattevi, A.
登録日2007-07-12
公開日2007-10-16
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structures of human monoamine oxidase B complexes with selective noncovalent inhibitors: safinamide and coumarin analogs.
J.Med.Chem., 50, 2007
5A1Z
DownloadVisualize
BU of 5a1z by Molmil
Cryo-EM structure of Dengue virus serotype 2 strain PVP94-07 complexed with human antibody 2D22 Fab at 37 degrees C
分子名称: ANTIGEN-BINDING FRAGMENT OF HUMAN ANTIBODY 2D22 - HEAVY CHAIN, ANTIGEN-BINDING FRAGMENT OF HUMAN ANTIBODY 2D22 - LIGHT CHAIN, ENVELOPE PROTEIN, ...
著者Fibriansah, G, Ibarra, K.D, Ng, T.S, Smith, S.A, Tan, J.L, Lim, X.N, Ooi, J.S.G, Kostyuchenko, V.A, Wang, J, de Silva, A.M, Harris, E, Crowe Jr, J.E, Lok, S.M.
登録日2015-05-06
公開日2015-07-15
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (6.9 Å)
主引用文献Cryo-EM structure of an antibody that neutralizes dengue virus type 2 by locking E protein dimers.
Science, 349, 2015
7JW6
DownloadVisualize
BU of 7jw6 by Molmil
Crystal structure of Drosophila Nibbler EXO domain
分子名称: Exonuclease mut-7 homolog
著者Xie, W, Sowemimo, I, Hayashi, R, Wang, J, Brennecke, J, Ameres, S.L, Patel, D.J.
登録日2020-08-24
公開日2021-01-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure-function analysis of microRNA 3'-end trimming by Nibbler.
Proc.Natl.Acad.Sci.USA, 117, 2020
5EFI
DownloadVisualize
BU of 5efi by Molmil
Crystal structure of mouse CD1d in complex with the p99p lipopeptide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
著者Girardi, E, Wang, J, Zajonc, D.M.
登録日2015-10-23
公開日2016-03-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of an alpha-Helical Peptide and Lipopeptide Bound to the Nonclassical Major Histocompatibility Complex (MHC) Class I Molecule CD1d.
J.Biol.Chem., 291, 2016
5TPQ
DownloadVisualize
BU of 5tpq by Molmil
E. coli alkaline phosphatase D101A, D153A, R166S, E322A, K328A mutant
分子名称: Alkaline phosphatase, PHOSPHATE ION, ZINC ION
著者Sunden, F, AlSadhan, I, Lyubimov, A.Y, Doukov, T, Swan, J, Herschlag, D.
登録日2016-10-20
公開日2017-11-01
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Differential catalytic promiscuity of the alkaline phosphatase superfamily bimetallo core reveals mechanistic features underlying enzyme evolution.
J. Biol. Chem., 292, 2017
2V60
DownloadVisualize
BU of 2v60 by Molmil
Structure of human MAO B in complex with the selective inhibitor 7-(3- chlorobenzyloxy)-4-carboxaldehyde-coumarin
分子名称: 7-[(3-CHLOROBENZYL)OXY]-2-OXO-2H-CHROMENE-4-CARBALDEHYDE, AMINE OXIDASE (FLAVIN-CONTAINING) B, FLAVIN-ADENINE DINUCLEOTIDE
著者Binda, C, Wang, J, Pisani, L, Caccia, C, Carotti, A, Salvati, P, Edmondson, D.E, Mattevi, A.
登録日2007-07-12
公開日2007-10-16
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of Human Monoamine Oxidase B Complexes with Selective Noncovalent Inhibitors: Safinamide and Coumarin Analogs.
J.Med.Chem., 50, 2007
4Y6K
DownloadVisualize
BU of 4y6k by Molmil
Complex structure of presenilin homologue PSH bound to an inhibitor
分子名称: N-{(2R,4S,5S)-2-benzyl-5-[(tert-butoxycarbonyl)amino]-4-hydroxy-6-phenylhexanoyl}-L-leucyl-L-phenylalaninamide, Uncharacterized protein PSH
著者Dang, S, Wu, S, Wang, J, Shi, Y.
登録日2015-02-13
公開日2015-03-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.855 Å)
主引用文献Cleavage of amyloid precursor protein by an archaeal presenilin homologue PSH
Proc.Natl.Acad.Sci.USA, 112, 2015
2V61
DownloadVisualize
BU of 2v61 by Molmil
Structure of human MAO B in complex with the selective inhibitor 7-(3- chlorobenzyloxy)-4-(methylamino)methyl-coumarin
分子名称: 7-[(3-CHLOROBENZYL)OXY]-4-[(METHYLAMINO)METHYL]-2H-CHROMEN-2-ONE, AMINE OXIDASE (FLAVIN-CONTAINING) B, FLAVIN-ADENINE DINUCLEOTIDE
著者Binda, C, Wang, J, Pisani, L, Caccia, C, Carotti, A, Salvati, P, Edmondson, D.E, Mattevi, A.
登録日2007-07-13
公開日2007-10-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structures of Human Monoamine Oxidase B Complexes with Selective Noncovalent Inhibitors: Safinamide and Coumarin Analogs.
J.Med.Chem., 50, 2007
4YCW
DownloadVisualize
BU of 4ycw by Molmil
Crystal structure of cladosporin in complex with plasmodium like human lysyl-tRNA synthetase mutant
分子名称: Aminoacyl tRNA synthase complex-interacting multifunctional protein 2, LYSINE, Lysine--tRNA ligase, ...
著者Fang, P, Wang, J, Guo, M.
登録日2015-02-20
公開日2015-06-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural Basis for Specific Inhibition of tRNA Synthetase by ATP Competitive Inhibitor
Chem.Biol., 22, 2015
6JVY
DownloadVisualize
BU of 6jvy by Molmil
Crystal structure of RBM38 in complex with single-stranded DNA
分子名称: DNA (5'-D(*TP*GP*TP*GP*TP*GP*TP*GP*TP*GP*TP*G)-3'), RNA-binding protein 38, SULFATE ION
著者Qian, K, Li, M, Wang, J, Zhang, M, Wang, M.
登録日2019-04-17
公開日2020-01-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.003 Å)
主引用文献Structural basis for mRNA recognition by human RBM38.
Biochem.J., 477, 2020
4YCU
DownloadVisualize
BU of 4ycu by Molmil
Crystal structure of cladosporin in complex with human lysyl-tRNA synthetase
分子名称: Aminoacyl tRNA synthase complex-interacting multifunctional protein 2, GLYCEROL, LYSINE, ...
著者Fang, P, Wang, J, Guo, M.
登録日2015-02-20
公開日2015-06-10
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis for Specific Inhibition of tRNA Synthetase by an ATP Competitive Inhibitor.
Chem. Biol., 22, 2015
4YCV
DownloadVisualize
BU of 4ycv by Molmil
Crystal structure of cladosporin in complex with plasmodium lysyl-tRNA synthetase
分子名称: Lysine--tRNA ligase, cladosporin
著者Fang, P, Wang, J, Guo, M.
登録日2015-02-20
公開日2015-06-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.406 Å)
主引用文献Structural Basis for Specific Inhibition of tRNA Synthetase by an ATP Competitive Inhibitor.
Chem.Biol., 22, 2015
5AX8
DownloadVisualize
BU of 5ax8 by Molmil
Recombinant expression, purification and preliminary crystallographic studies of the mature form of human mitochondrial aspartate aminotransferase
分子名称: Aspartate aminotransferase, mitochondrial
著者Jiang, X, Wang, J, Chang, H, Zhou, Y.
登録日2015-07-20
公開日2016-03-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.989 Å)
主引用文献Recombinant expression, purification and crystallographic studies of the mature form of human mitochondrial aspartate aminotransferase
Biosci Trends, 10, 2016
2VRM
DownloadVisualize
BU of 2vrm by Molmil
Structure of human MAO B in complex with phenyethylhydrazine
分子名称: AMINE OXIDASE [FLAVIN-CONTAINING] B, FLAVIN-ADENINE DINUCLEOTIDE, PHENYLETHANE
著者Binda, C, Wang, J, Li, M, Hubalek, F, Mattevi, A, Edmondson, D.E.
登録日2008-04-09
公開日2008-04-22
最終更新日2014-01-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and Mechanistic Studies of Arylalkylhydrazine Inhibition of Human Monoamine Oxidases a and B
Biochemistry, 47, 2008
3U83
DownloadVisualize
BU of 3u83 by Molmil
Crystal structure of nectin-1
分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, Poliovirus receptor-related protein 1
著者Zhang, N, Yan, J, Lu, G, Guo, Z, Fan, Z, Wang, J, Shi, Y, Qi, J, Gao, G.F.
登録日2011-10-15
公開日2012-03-21
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献Binding of herpes simplex virus glycoprotein D to nectin-1 exploits host cell adhesion.
Nat Commun, 2, 2011
5XOU
DownloadVisualize
BU of 5xou by Molmil
Crystal structure of T. thermophilus Argonaute protein complexed with a bulge 7T8 on the guide strand
分子名称: DNA (5'-D(*AP*CP*AP*AP*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*CP*G)-3'), DNA (5'-D(P*TP*GP*AP*GP*GP*TP*AP*TP*GP*GP*TP*TP*GP*T)-3'), MAGNESIUM ION, ...
著者Sheng, G, Wang, J, Zhao, H, Wang, Y.
登録日2017-05-31
公開日2017-10-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Structure/cleavage-based insights into helical perturbations at bulge sites within T. thermophilus Argonaute silencing complexes
Nucleic Acids Res., 45, 2017

227111

件を2024-11-06に公開中

PDB statisticsPDBj update infoContact PDBjnumon