Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7Q64
DownloadVisualize
BU of 7q64 by Molmil
Cryo-em structure of the Nup98 fibril polymorph 1
分子名称: Nuclear pore complex protein Nup98
著者Ibanez de Opakua, A, Geraets, J.A, Frieg, B, Dienemann, C, Savastano, A, Rankovic, M, Cima-Omori, M.-S, Schroeder, G.F, Zweckstetter, M.
登録日2021-11-05
公開日2022-10-12
最終更新日2022-11-16
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Molecular interactions of FG nucleoporin repeats at high resolution.
Nat.Chem., 14, 2022
7Q65
DownloadVisualize
BU of 7q65 by Molmil
Cryo-em structure of the Nup98 fibril polymorph 2
分子名称: Nuclear pore complex protein Nup98
著者Ibanez de Opakua, A, Geraets, J.A, Frieg, B, Dienemann, C, Savastano, A, Rankovic, M, Cima-Omori, M.-S, Schroeder, G.F, Zweckstetter, M.
登録日2021-11-05
公開日2022-10-12
最終更新日2022-11-16
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Molecular interactions of FG nucleoporin repeats at high resolution.
Nat.Chem., 14, 2022
7Q67
DownloadVisualize
BU of 7q67 by Molmil
Cryo-em structure of the Nup98 fibril polymorph 4
分子名称: Nuclear pore complex protein Nup98
著者Ibanez de Opakua, A, Geraets, J.A, Frieg, B, Dienemann, C, Savastano, A, Rankovic, M, Cima-Omori, M.-S, Schroeder, G.F, Zweckstetter, M.
登録日2021-11-05
公開日2022-10-12
最終更新日2022-11-16
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Molecular interactions of FG nucleoporin repeats at high resolution.
Nat.Chem., 14, 2022
7Q66
DownloadVisualize
BU of 7q66 by Molmil
Cryo-em structure of the Nup98 fibril polymorph 3
分子名称: Nuclear pore complex protein Nup98
著者Ibanez de Opakua, A, Geraets, J.A, Frieg, B, Dienemann, C, Savastano, A, Rankovic, M, Cima-Omori, M.-S, Schroeder, G.F, Zweckstetter, M.
登録日2021-11-05
公開日2022-10-12
最終更新日2022-11-16
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Molecular interactions of FG nucleoporin repeats at high resolution.
Nat.Chem., 14, 2022
2CCS
DownloadVisualize
BU of 2ccs by Molmil
HUMAN HSP90 WITH 4-CHLORO-6-(4-PIPERAZIN-1-YL-1H-PYRAZOL-3-YL)- BENZENE-1,2-DIOL
分子名称: 4-CHLORO-6-(4-PIPERAZIN-1-YL-1H-PYRAZOL-5-YL)BENZENE-1,3-DIOL, HEAT SHOCK PROTEIN HSP-90 ALPHA
著者Barril, X, Beswick, M.C, Collier, A, Drysdale, M.J, Dymock, B.W, Fink, A, Grant, K, Howes, R, Jordan, A.M, Massey, A, Surgenor, A, Wayne, J, Workman, P, Wright, L.
登録日2006-01-18
公開日2006-02-22
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献4-Amino derivatives of the Hsp90 inhibitor CCT018159.
Bioorg. Med. Chem. Lett., 16, 2006
3MTN
DownloadVisualize
BU of 3mtn by Molmil
Usp21 in complex with a ubiquitin-based, USP21-specific inhibitor
分子名称: CHLORIDE ION, GLYCEROL, UBIQUITIN VARIANT UBV.21.4, ...
著者Walker, J.R, Avvakumov, G.V, Xue, S, Li, Y, Ernst, A, Sidhu, S, Weigelt, J, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2010-04-30
公開日2010-06-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A strategy for modulation of enzymes in the ubiquitin system.
Science, 339, 2013
1B30
DownloadVisualize
BU of 1b30 by Molmil
XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH 1,2-(4-DEOXY-BETA-L-THREO-HEX-4-ENOPYRANOSYLURONIC ACID)-BETA-1,4-XYLOTRIOSE)
分子名称: PROTEIN (XYLANASE), beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
著者Schmidt, A, Kratky, C.
登録日1998-12-15
公開日1999-03-31
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Xylan binding subsite mapping in the xylanase from Penicillium simplicissimum using xylooligosaccharides as cryo-protectant.
Biochemistry, 38, 1999
2CJW
DownloadVisualize
BU of 2cjw by Molmil
Crystal structure of the small GTPase Gem (GemDNDCaM) in complex to Mg.GDP
分子名称: GTP-BINDING PROTEIN GEM, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
著者Splingard, A, Menetrey, J, Perderiset, M, Cicolari, J, Hamoudi, F, Cabanie, L, El Marjou, A, Wells, A, Houdusse, A, de Gunzburg, J.
登録日2006-04-09
公開日2006-11-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Biochemical and Structural Characterization of the Gem Gtpase.
J.Biol.Chem., 282, 2007
7OGJ
DownloadVisualize
BU of 7ogj by Molmil
Crystal structure of human METTL1 in complex with SAH
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Nai, F, Bedi, R.K, Caflisch, A.
登録日2021-05-06
公開日2021-05-19
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Small-Molecule Inhibitors of the m7G-RNA Writer METTL1
Acs Bio Med Chem Au, 2023
4XQZ
DownloadVisualize
BU of 4xqz by Molmil
Calcium(II) and copper(II) bound to the Z-DNA form of d(CGCGCG), complexed by chloride and MES
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
著者Rohner, M, Medina-Molner, A, Spingler, B.
登録日2015-01-20
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.151 Å)
主引用文献N,N,O and N,O,N Meridional cis Coordination of Two Guanines to Copper(II) by d(CGCGCG)2.
Inorg.Chem., 55, 2016
7JU7
DownloadVisualize
BU of 7ju7 by Molmil
The crystal structure of SARS-CoV-2 Main Protease in complex with masitinib
分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Tan, K, Maltseva, N.I, Welk, L.F, Jedrzejczak, R.P, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-08-19
公開日2020-09-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Masitinib is a broad coronavirus 3CL inhibitor that blocks replication of SARS-CoV-2.
Science, 373, 2021
8OSV
DownloadVisualize
BU of 8osv by Molmil
Structural and functional studies of geldanamycin amide synthase ShGdmF
分子名称: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
著者Ewert, W, Zeilinger, C, Kirschning, A, Preller, M.
登録日2023-04-20
公開日2024-05-01
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Structural and functional studies of geldanamycin amide synthase ShGdmF
To Be Published
8OT2
DownloadVisualize
BU of 8ot2 by Molmil
Structural and functional studies of geldanamycin amide synthase ShGdmF
分子名称: 1,2-ETHANEDIOL, 3-azanyl-5-methyl-phenol, ACETATE ION, ...
著者Ewert, W, Zeilinger, C, Kirschning, A, Preller, M.
登録日2023-04-20
公開日2024-05-01
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Structural and functional studies of geldanamycin amide synthase ShGdmF
To Be Published
4QUU
DownloadVisualize
BU of 4quu by Molmil
Structure of the bromodomain of human ATPase family AAA domain-containing protein 2 (ATAD2) complexed with Histone H4-K(ac)5
分子名称: 1,2-ETHANEDIOL, ATPase family AAA domain-containing protein 2, Histone H4, ...
著者Chaikuad, A, Felletar, I, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2014-07-12
公開日2014-07-30
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Atad2 is a generalist facilitator of chromatin dynamics in embryonic stem cells.
J Mol Cell Biol, 8, 2016
4QXW
DownloadVisualize
BU of 4qxw by Molmil
Crystal structure of the human CEACAM1 membrane distal amino terminal (N)-domain
分子名称: Carcinoembryonic antigen-related cell adhesion molecule 1, MALONIC ACID, octyl beta-D-glucopyranoside
著者Huang, Y.H, Gandhi, A.K, Russell, A, Kondo, Y, Chen, Q, Petsko, G.A, Blumberg, R.S.
登録日2014-07-22
公開日2014-11-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献CEACAM1 regulates TIM-3-mediated tolerance and exhaustion.
Nature, 517, 2015
1B3W
DownloadVisualize
BU of 1b3w by Molmil
XYLANASE FROM PENICILLIUM SIMPLICISSIMUM, COMPLEX WITH XYLOBIOSE
分子名称: PROTEIN (XYLANASE), alpha-D-xylopyranose-(1-4)-beta-D-xylopyranose, beta-D-xylopyranose
著者Schmidt, A, Kratky, C.
登録日1998-12-15
公開日1999-04-07
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Xylan binding subsite mapping in the xylanase from Penicillium simplicissimum using xylooligosaccharides as cryo-protectant.
Biochemistry, 38, 1999
1U2X
DownloadVisualize
BU of 1u2x by Molmil
Crystal Structure of a Hypothetical ADP-dependent Phosphofructokinase from Pyrococcus horikoshii OT3
分子名称: ADP-specific phosphofructokinase, SULFATE ION
著者Wong, A.H.Y, Jia, Z, Skarina, T, Walker, J.R, Arrowsmith, C, Joachimiak, A, Edwards, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2004-07-20
公開日2004-09-14
最終更新日2012-10-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献ADP-dependent 6-phosphofructokinase from Pyrococcus horikoshii OT3: structure determination and biochemical characterization of PH1645.
J.Biol.Chem., 284, 2009
3ZEZ
DownloadVisualize
BU of 3zez by Molmil
Phage dUTPases control transfer of virulence genes by a proto- oncogenic G protein-like mechanism.(Staphylococcus bacteriophage 80alpha dUTPase with dUPNHPP).
分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, DUTPASE, MAGNESIUM ION, ...
著者Tormo-Mas, M.A, Donderis, J, Garcia-Caballer, M, Alt, A, Mir-Sanchis, I, Marina, A, Penades, J.R.
登録日2012-12-10
公開日2013-01-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Phage Dutpases Control Transfer of Virulence Genes by a Proto-Oncogenic G Protein-Like Mechanism.
Mol.Cell, 49, 2013
2WBD
DownloadVisualize
BU of 2wbd by Molmil
FRUCTOSE-1,6-BISPHOSPHATASE(D-FRUCTOSE-1,6-BISPHOSPHATE-1- PHOSPHOHYDROLASE) (E.C.3.1.3.11) COMPLEXED WITH AN AMP SITE INHIBITOR
分子名称: FRUCTOSE-1,6-BISPHOSPHATASE 1, N-[(5-bromo-1,3-thiazol-2-yl)carbamoyl]-3-ethylbenzenesulfonamide
著者Ruf, A, Joseph, C, Benz, J, Fol, B, Tetaz, T, Kitas, E, Mohr, P, Kuhn, B, Wessel, H.P, Hebeisen, P, Haap, W, Huber, W, Alvarez Sanchez, R, Paehler, A, Bernadeau, A, Gubler, M, Schott, B, Tozzo, E.
登録日2009-02-26
公開日2009-12-22
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Sulfonylureido Thiazoles as Fructose-1,6-Bisphosphatase Inhibitors for the Treatment of Type-2 Diabetes.
Bioorg.Med.Chem.Lett., 20, 2010
4CG8
DownloadVisualize
BU of 4cg8 by Molmil
Human choline kinase a1 in complex with compound 14
分子名称: 1-benzyl-4-(dimethylamino)pyridinium, 4-[(4-chlorophenyl)(methyl)amino]-1-{4-[4-(4-{[4-(dimethylamino)pyridinium-1-yl]methyl}phenyl)butyl]benzyl}pyridinium, CHOLINE KINASE ALPHA
著者Rubio-Ruiz, B, Figuerola-Conchas, A, Entrena-Guadix, A, Hurtado-Guerrero, R, Conejo-Garcia, A.
登録日2013-11-21
公開日2014-01-15
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Discovery of a New Binding Site on Human Choline Kinase A1: Design, Synthesis, Crystallographic Studies and Biological Evaluation of Asymmetrical Bispyridinium Derivatives
J.Med.Chem., 57, 2014
6FKP
DownloadVisualize
BU of 6fkp by Molmil
Crystal structure of BAZ2A PHD zinc finger in complex with H3 10-mer AA mutant peptide
分子名称: ALA-ARG-THR-ALA-ALA-THR-ALA-ARG, Bromodomain adjacent to zinc finger domain protein 2A, GLYCEROL, ...
著者Amato, A, Lucas, X, Bortoluzzi, A, Wright, D, Ciulli, A.
登録日2018-01-24
公開日2018-03-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Targeting Ligandable Pockets on Plant Homeodomain (PHD) Zinc Finger Domains by a Fragment-Based Approach.
ACS Chem. Biol., 13, 2018
2VIZ
DownloadVisualize
BU of 2viz by Molmil
Human BACE-1 in complex with N-((1S,2R)-3-(((1S)-2-(cyclohexylamino)- 1-methyl-2-oxoethyl)amino)-2-hydroxy-1-(phenylmethyl)propyl)-3-(2-oxo- 1-pyrrolidinyl)-5-(propyloxy)benzamide
分子名称: BETA-SECRETASE 1, N-[(1S,2R)-1-benzyl-3-{[(1S)-2-(cyclohexylamino)-1-methyl-2-oxoethyl]amino}-2-hydroxypropyl]-3-(2-oxo-2,3-dihydro-1H-pyrrol-1-yl)-5-propoxybenzamide
著者Clarke, B, Demont, E, Dingwall, C, Dunsdon, R, Faller, A, Hawkins, J, Hussain, I, MacPherson, D, Maile, G, Matico, R, Milner, P, Mosley, J, Naylor, A, O'Brien, A, Redshaw, S, Riddell, D, Rowland, P, Soleil, V, Smith, K, Stanway, S, Stemp, G, Sweitzer, S, Theobald, P, Vesey, D, Walter, D.S, Ward, J, Wayne, G.
登録日2007-12-06
公開日2008-01-29
最終更新日2019-05-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Bace-1 Inhibitors Part 1: Identification of Novel Hydroxy Ethylamines (Heas).
Bioorg.Med.Chem.Lett., 18, 2008
4QTL
DownloadVisualize
BU of 4qtl by Molmil
Crystal structure of human carbonic anhydrase isozyme II with inhibitor
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-(benzylamino)-2,5,6-trifluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide, Carbonic anhydrase 2, ...
著者Smirnov, A, Manakova, E, Grazulis, S.
登録日2014-07-08
公開日2015-04-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Functionalization of Fluorinated Benzenesulfonamides and Their Inhibitory Properties toward Carbonic Anhydrases
Chemmedchem, 10, 2015
7O6Z
DownloadVisualize
BU of 7o6z by Molmil
Structure of a neodymium-containing, XoxF1-type methanol dehydrogenase
分子名称: METHANOL, Methanol dehydrogenase (Cytochrome c) subunit 1, Neodymium Ion, ...
著者Schmitz, R, Dietl, A, Op den Camp, H, Barends, T.
登録日2021-04-12
公開日2021-09-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Neodymium as Metal Cofactor for Biological Methanol Oxidation: Structure and Kinetics of an XoxF1-Type Methanol Dehydrogenase.
Mbio, 12, 2021
6R2V
DownloadVisualize
BU of 6r2v by Molmil
Arabidopsis NF-Y/CCAAT-box complex
分子名称: FT (-5kb) CCAAT-box 3', FT (-5kb) CCAAT-box 5', NF-YB2, ...
著者Chaves-Sanjuan, A, Gnesutta, N, Chiara, M, Bernardini, A, Fornara, F, Horner, D, Nardini, M, Mantovani, R.
登録日2019-03-19
公開日2020-09-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.503 Å)
主引用文献Structural determinants for NF-Y subunit organization and NF-Y/DNA association in plants.
Plant J., 105, 2021

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon