Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1GRL
DownloadVisualize
BU of 1grl by Molmil
THE CRYSTAL STRUCTURE OF THE BACTERIAL CHAPERONIN GROEL AT 2.8 ANGSTROMS
分子名称: GROEL (HSP60 CLASS)
著者Braig, K, Otwinowski, Z, Hegde, R, Boisvert, D.C, Joachimiak, A, Horwich, A.L, Sigler, P.B.
登録日1995-03-07
公開日1995-10-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The crystal structure of the bacterial chaperonin GroEL at 2.8 A.
Nature, 371, 1994
6HI3
DownloadVisualize
BU of 6hi3 by Molmil
The ATAD2 bromodomain in complex with compound 4
分子名称: 2-azanyl-~{N}-(4-ethanoyl-1,3-thiazol-2-yl)-2-methyl-propanamide, ATPase family AAA domain-containing protein 2, SULFATE ION
著者Sledz, P, Caflisch, A.
登録日2018-08-29
公開日2019-02-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Hitting a Moving Target: Simulation and Crystallography Study of ATAD2 Bromodomain Blockers.
Acs Med.Chem.Lett., 11, 2020
6HI6
DownloadVisualize
BU of 6hi6 by Molmil
The ATAD2 bromodomain in complex with compound 9
分子名称: (2~{R})-2-azanyl-~{N}-(4-ethanoyl-5-pyridin-3-yl-1,3-thiazol-2-yl)propanamide, ATPase family AAA domain-containing protein 2, SULFATE ION
著者Sledz, P, Caflisch, A.
登録日2018-08-29
公開日2019-02-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Hitting a Moving Target: Simulation and Crystallography Study of ATAD2 Bromodomain Blockers.
Acs Med.Chem.Lett., 11, 2020
6HIB
DownloadVisualize
BU of 6hib by Molmil
The ATAD2 bromodomain in complex with compound 14
分子名称: 1-azanyl-~{N}-[5-(5-azanylpyridin-3-yl)-4-ethanoyl-1,3-thiazol-2-yl]cyclobutane-1-carboxamide, ATPase family AAA domain-containing protein 2, SULFATE ION
著者Sledz, P, Caflisch, A.
登録日2018-08-29
公開日2019-02-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.029 Å)
主引用文献Hitting a Moving Target: Simulation and Crystallography Study of ATAD2 Bromodomain Blockers.
Acs Med.Chem.Lett., 11, 2020
5NX1
DownloadVisualize
BU of 5nx1 by Molmil
Combinatorial Engineering of Proteolytically Resistant APPI Variants that Selectively Inhibit Human Kallikrein 6 for Cancer Therapy
分子名称: Amyloid-beta A4 protein, Kallikrein-6
著者Shahar, A, Sananes, A, Radisky, E.S, Papo, N.
登録日2017-05-09
公開日2018-05-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.853 Å)
主引用文献A potent, proteolysis-resistant inhibitor of kallikrein-related peptidase 6 (KLK6) for cancer therapy, developed by combinatorial engineering.
J.Biol.Chem., 293, 2018
1HFJ
DownloadVisualize
BU of 1hfj by Molmil
Asparaginase from Erwinia chrysanthemi, hexagonal form with sulfate
分子名称: L-ASPARAGINE AMIDOHYDROLASE, SULFATE ION
著者Palm, G.J, Lubkowski, J, Kozak, M, Jaskolski, M, Wlodawer, A.
登録日2000-12-05
公開日2000-12-07
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of Two Highly Homologous Bacterial L-Asparaginases: A Case of Enantiomorphic Space Groups
Acta Crystallogr.,Sect.D, 57, 2001
5FOJ
DownloadVisualize
BU of 5foj by Molmil
Cryo electron microscopy structure of Grapevine Fanleaf Virus complex with Nanobody
分子名称: Nanobody, RNA2 polyprotein
著者Orlov, I, Hemmer, C, Ackerer, L, Lorber, B, Ghannam, A, Poignavent, V, Hleibieh, K, Sauter, C, Schmitt-Keichinger, C, Belval, L, Hily, J.M, Marmonier, A, Komar, V, Gersch, S, Schellenberger, P, Bron, P, Vigne, E, Muyldermans, S, Lemaire, O, Demangeat, G, Ritzenthaler, C, Klaholz, B.P.
登録日2015-11-22
公開日2016-01-20
最終更新日2021-08-11
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural basis of nanobody recognition of grapevine fanleaf virus and of virus resistance loss.
Proc.Natl.Acad.Sci.USA, 2020
3C5N
DownloadVisualize
BU of 3c5n by Molmil
Structure of human TULP1 in complex with IP3
分子名称: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Tubby-related protein 1
著者Busam, R.D, Lehtio, L, Arrowsmith, C.H, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Herman, M.D, Johansson, A, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Svensson, L, Thorsell, A.G, Tresaugues, L, Van den Berg, S, Weigelt, J, Welin, M, Berglund, H, Structural Genomics Consortium (SGC)
登録日2008-01-31
公開日2008-04-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of human TULP1 in complex with IP3
To be published
1JW3
DownloadVisualize
BU of 1jw3 by Molmil
Solution Structure of Methanobacterium Thermoautotrophicum Protein 1598. Ontario Centre for Structural Proteomics target MTH1598_1_140; Northeast Structural Genomics Target TT6
分子名称: Conserved Hypothetical Protein MTH1598
著者Chang, X, Connelly, G, Yee, A, Kennedy, M.A, Edwards, A.M, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG)
登録日2001-09-02
公開日2002-02-27
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献An NMR approach to structural proteomics.
Proc.Natl.Acad.Sci.USA, 99, 2002
5FTM
DownloadVisualize
BU of 5ftm by Molmil
Cryo-EM structure of human p97 bound to ATPgS (Conformation II)
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
著者Banerjee, S, Bartesaghi, A, Merk, A, Rao, P, Bulfer, S.L, Yan, Y, Green, N, Mroczkowski, B, Neitz, R.J, Wipf, P, Falconieri, V, Deshaies, R.J, Milne, J.L.S, Huryn, D, Arkin, M, Subramaniam, S.
登録日2016-01-14
公開日2016-01-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献2.3 A Resolution Cryo-Em Structure of Human P97 and Mechanism of Allosteric Inhibition
Science, 351, 2016
5FRE
DownloadVisualize
BU of 5fre by Molmil
Characterization of a novel CBM from Clostridium perfringens
分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, ACETATE ION, CALCIUM ION, ...
著者Ribeiro, J, Pau, W, Pifferi, C, Renaudet, O, Varrot, A, Mahal, L.K, Imberty, A.
登録日2015-12-17
公開日2016-07-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Characterization of a High-Affinity Sialic Acid-Specific Cbm40 from Clostridium Perfringens and Engineering of a Divalent Form.
Biochem.J., 473, 2016
1JVC
DownloadVisualize
BU of 1jvc by Molmil
Dimeric DNA Quadruplex Containing Major Groove-Aligned A.T.A.T and G.C.G.C Tetrads Stabilized by Inter-Subunit Watson-Crick A:T and G:C Pairs
分子名称: 5'-D(*GP*AP*GP*CP*AP*GP*GP*T)-3'
著者Zhang, N, Gorin, A, Majumdar, A, Kettani, A, Chernichenko, N, Skripkin, E, Patel, D.J.
登録日2001-08-29
公開日2001-10-24
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Dimeric DNA quadruplex containing major groove-aligned A-T-A-T and G-C-G-C tetrads stabilized by inter-subunit Watson-Crick A-T and G-C pairs.
J.Mol.Biol., 312, 2001
1JVV
DownloadVisualize
BU of 1jvv by Molmil
CRYSTAL STRUCTURE OF RIBONUCLEASE A (RETRO-SOAKED FORM)
分子名称: RIBONUCLEASE A
著者Vitagliano, L, Merlino, A, Zagari, A, Mazzarella, L.
登録日2001-08-31
公開日2002-06-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Reversible Substrate-Induced Domain Motions in Ribonuclease A
Proteins, 46, 2002
1JZX
DownloadVisualize
BU of 1jzx by Molmil
Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria
分子名称: 23S rRNA, CLINDAMYCIN, MAGNESIUM ION, ...
著者Schluenzen, F, Zarivach, R, Harms, J, Bashan, A, Tocilj, A, Albrecht, R, Yonath, A, Franceschi, F.
登録日2001-09-17
公開日2001-10-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis for the interaction of antibiotics with the peptidyl transferase centre in eubacteria.
Nature, 413, 2001
1K01
DownloadVisualize
BU of 1k01 by Molmil
Structural Basis for the Interaction of Antibiotics with the Peptidyl Transferase Center in Eubacteria
分子名称: 23S rRNA, CHLORAMPHENICOL, MAGNESIUM ION, ...
著者Schluenzen, F, Zarivach, R, Harms, J, Bashan, A, Tocilj, A, Albrecht, R, Yonath, A, Franceschi, F.
登録日2001-09-17
公開日2001-10-26
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural basis for the interaction of antibiotics with the peptidyl transferase centre in eubacteria.
Nature, 413, 2001
1U60
DownloadVisualize
BU of 1u60 by Molmil
MCSG APC5046 Probable glutaminase ybaS
分子名称: 1,2-ETHANEDIOL, FORMIC ACID, Probable glutaminase ybaS
著者Chang, C, Cuff, M.E, Joachimiak, A, Savchenko, A, Edwards, A, Skarina, T, Midwest Center for Structural Genomics (MCSG)
登録日2004-07-28
公開日2004-09-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Functional and structural characterization of four glutaminases from Escherichia coli and Bacillus subtilis.
Biochemistry, 47, 2008
3QVM
DownloadVisualize
BU of 3qvm by Molmil
The structure of olei00960, a hydrolase from Oleispira antarctica
分子名称: CALCIUM ION, CHLORIDE ION, Olei00960, ...
著者Singer, A.U, Kagan, O, Kim, Y, Edwards, A.M, Joachimiak, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
登録日2011-02-25
公開日2011-04-13
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica.
Nat Commun, 4, 2013
5H5L
DownloadVisualize
BU of 5h5l by Molmil
Structure of prostaglandin synthase D of Nilaparvata lugens
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLUTATHIONE, ...
著者Yamamoto, K, Higashiura, A, Suzuki, S, Nakagawa, A.
登録日2016-11-07
公開日2017-09-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Molecular structure of a prostaglandin D synthase requiring glutathione from the brown planthopper, Nilaparvata lugens
Biochem. Biophys. Res. Commun., 492, 2017
6G29
DownloadVisualize
BU of 6g29 by Molmil
X-ray structure of NSD3-PWWP1 in complex with compound 6
分子名称: 5-methyl-2-piperidin-4-yl-6-pyridin-4-yl-pyridazin-3-one, Histone-lysine N-methyltransferase NSD3
著者Boettcher, J, Muellauer, B.J, Weiss-Puxbaum, A, Zoephel, A.
登録日2018-03-22
公開日2019-06-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Fragment-based discovery of a chemical probe for the PWWP1 domain of NSD3.
Nat.Chem.Biol., 15, 2019
5HCB
DownloadVisualize
BU of 5hcb by Molmil
Globular Domain of the Entamoeba histolytica calreticulin in complex with glucose
分子名称: CALCIUM ION, CHLORIDE ION, Calreticulin, ...
著者Moreau, C.P, Cioci, G, Ianello, M, Laffly, E, Chouquet, A, Ferreira, A, Thielens, N.M, Gaboriaud, C.
登録日2016-01-04
公開日2016-08-31
最終更新日2017-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structures of parasite calreticulins provide insights into their flexibility and dual carbohydrate/peptide-binding properties.
IUCrJ, 3, 2016
6G2E
DownloadVisualize
BU of 6g2e by Molmil
X-ray structure of NSD3-PWWP1 in complex with compound 13
分子名称: Histone-lysine N-methyltransferase NSD3, [3,5-dimethyl-4-(1-methyl-5-pyridin-4-yl-imidazol-4-yl)phenyl]methanamine
著者Boettcher, J, Muellauer, B.J, Weiss-Puxbaum, A, Zoephel, A.
登録日2018-03-23
公開日2019-06-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Fragment-based discovery of a chemical probe for the PWWP1 domain of NSD3.
Nat.Chem.Biol., 15, 2019
1JI2
DownloadVisualize
BU of 1ji2 by Molmil
Improved X-ray Structure of Thermoactinomyces vulgaris R-47 alpha-Amylase 2
分子名称: ALPHA-AMYLASE II, CALCIUM ION
著者Kamitori, S, Abe, A, Ohtaki, A, Kaji, A, Tonozuka, T, Sakano, Y.
登録日2001-06-28
公開日2002-06-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures and structural comparison of Thermoactinomyces vulgaris R-47 alpha-amylase 1 (TVAI) at 1.6 A resolution and alpha-amylase 2 (TVAII) at 2.3 A resolution.
J.Mol.Biol., 318, 2002
3B7K
DownloadVisualize
BU of 3b7k by Molmil
Human Acyl-coenzyme A thioesterase 12
分子名称: Acyl-coenzyme A thioesterase 12, COENZYME A
著者Lehtio, L, Busam, R.D, Arrowsmith, C.H, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Herman, M.D, Johansson, A, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Sundstrom, M, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Berglund, H, Structural Genomics Consortium (SGC)
登録日2007-10-31
公開日2007-11-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Human Acyl-coenzyme A thioesterase 12.
To be Published
1RP5
DownloadVisualize
BU of 1rp5 by Molmil
PBP2x from Streptococcus pneumoniae strain 5259 with reduced susceptibility to beta-lactam antibiotics
分子名称: SULFATE ION, penicillin-binding protein 2x
著者Pernot, L, Chesnel, L, Legouellec, A, Croize, J, Vernet, T, Dideberg, O, Dessen, A.
登録日2003-12-03
公開日2004-02-03
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A PBP2x from a clinical isolate of Streptococcus pneumoniae exhibits an alternative mechanism for reduction of susceptibility to beta-lactam antibiotics.
J.Biol.Chem., 279, 2004
4I5G
DownloadVisualize
BU of 4i5g by Molmil
Crystal structure of Ralstonia sp. alcohol dehydrogenase mutant N15G, G37D, R38V, R39S, A86N, S88A
分子名称: Alclohol dehydrogenase/short-chain dehydrogenase
著者Jarasch, A, Lerchner, A, Meining, W, Schiefner, A, Skerra, A.
登録日2012-11-28
公開日2013-06-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystallographic analysis and structure-guided engineering of NADPH-dependent Ralstonia sp. Alcohol dehydrogenase toward NADH cosubstrate specificity.
Biotechnol.Bioeng., 110, 2013

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon