Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6D2Q
DownloadVisualize
BU of 6d2q by Molmil
Crystal structure of the FERM domain of zebrafish FARP1
分子名称: FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
著者Kuo, Y.C, Zhang, X.
登録日2018-04-13
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Structural analyses of FERM domain-mediated membrane localization of FARP1.
Sci Rep, 8, 2018
5K9N
DownloadVisualize
BU of 5k9n by Molmil
Structural and Mechanistic Analysis of Drosophila melanogaster Polyamine N acetyltransferase, an enzyme that Catalyzes the Formation of N acetylagmatine
分子名称: Polyamine N acetyltransferase
著者Dempsey, D.R, Nichols, D.A, Battistini, M.R, Pemberton, O, Ospina, S.R, Zhang, X, Carpenter, A.-M, Chen, Y, Merkler, D.J.
登録日2016-06-01
公開日2017-06-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and Mechanistic Analysis of Drosophila melanogaster Agmatine N-Acetyltransferase, an Enzyme that Catalyzes the Formation of N-Acetylagmatine.
Sci Rep, 7, 2017
6D21
DownloadVisualize
BU of 6d21 by Molmil
Crystal structure of the FERM domain of zebrafish FARP2
分子名称: FERM, RhoGEF and pleckstrin domain protein 2
著者Kuo, Y.C, Zhang, X.
登録日2018-04-12
公開日2018-07-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Structural analyses of FERM domain-mediated membrane localization of FARP1.
Sci Rep, 8, 2018
5YCO
DownloadVisualize
BU of 5yco by Molmil
Complex structure of PCNA with UHRF2
分子名称: E3 ubiquitin-protein ligase UHRF2, GLYCEROL, Proliferating cell nuclear antigen, ...
著者Wu, M, Chen, W, Hang, T, Wang, C, Zhang, X, Zang, J.
登録日2017-09-07
公開日2017-11-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.199 Å)
主引用文献Structure insights into the molecular mechanism of the interaction between UHRF2 and PCNA.
Biochem. Biophys. Res. Commun., 494, 2017
2LIT
DownloadVisualize
BU of 2lit by Molmil
NMR Solution Structure of Yeast Iso-1-cytochrome c Mutant P71H in reduced states
分子名称: Cytochrome c iso-1, HEME C
著者Lan, W, Wang, Z, Yang, Z, Zhu, J, Ying, T, Jiang, X, Zhang, X, Wu, H, Liu, M, Tan, X, Cao, C, Huang, Z.X.
登録日2011-08-31
公開日2011-12-07
最終更新日2024-10-16
実験手法SOLUTION NMR
主引用文献Conformational toggling of yeast iso-1-cytochrome C in the oxidized and reduced States.
Plos One, 6, 2011
3AIY
DownloadVisualize
BU of 3aiy by Molmil
R6 HUMAN INSULIN HEXAMER (SYMMETRIC), NMR, REFINED AVERAGE STRUCTURE
分子名称: PHENOL, PROTEIN (INSULIN)
著者O'Donoghue, S.I, Chang, X, Abseher, R, Nilges, M, Led, J.J.
登録日1998-12-29
公開日2000-02-28
最終更新日2024-10-30
実験手法SOLUTION NMR
主引用文献Unraveling the symmetry ambiguity in a hexamer: calculation of the R6 human insulin structure.
J.Biomol.NMR, 16, 2000
7XTZ
DownloadVisualize
BU of 7xtz by Molmil
Structure of SARS-CoV-2 Spike Protein with Engineered x3 Disulfide (x3(D427C, V987C) and single Arg S1/S2 cleavage site), Locked-1 Conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ...
著者Qu, K, Chen, Q, Ciazynska, K.A, Liu, B, Zhang, X, Wang, J, He, Y, Guan, J, He, J, Liu, T, Zhang, X, Carter, A.P, Xiong, X, Briggs, J.A.G.
登録日2022-05-18
公開日2022-07-20
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Engineered disulfide reveals structural dynamics of locked SARS-CoV-2 spike.
Plos Pathog., 18, 2022
3LNL
DownloadVisualize
BU of 3lnl by Molmil
Crystal structure of Staphylococcus aureus protein SA1388
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, UPF0135 protein SA1388, ZINC ION
著者Singh, K.S, Chruszcz, M, Zhang, X, Minor, W, Zhang, H.
登録日2010-02-02
公開日2010-03-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a Conserved Hypothetical Protein Sa1388 from S. aureus Reveals a Capped Hexameric Toroid with Two Pii Domain Lids and a Dinuclear Metal Center.
Bmc Struct.Biol., 6, 2006
7XU1
DownloadVisualize
BU of 7xu1 by Molmil
Structure of SARS-CoV-2 Spike Protein with Engineered x3 Disulfide (x3(D427C, V987C) and single Arg S1/S2 cleavage site), Locked-122 Conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ...
著者Qu, K, Chen, Q, Ciazynska, K.A, Liu, B, Zhang, X, Wang, J, He, Y, Guan, J, He, J, Liu, T, Zhang, X, Carter, A.P, Xiong, X, Briggs, J.A.G.
登録日2022-05-18
公開日2022-07-20
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Engineered disulfide reveals structural dynamics of locked SARS-CoV-2 spike.
Plos Pathog., 18, 2022
7XU4
DownloadVisualize
BU of 7xu4 by Molmil
Structure of SARS-CoV-2 D614G Spike Protein with Engineered x3 Disulfide (x3(D427C, V987C) and single Arg S1/S2 cleavage site), Locked-2 Conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ...
著者Qu, K, Chen, Q, Ciazynska, K.A, Liu, B, Zhang, X, Wang, J, He, Y, Guan, J, He, J, Liu, T, Zhang, X, Carter, A.P, Xiong, X, Briggs, J.A.G.
登録日2022-05-18
公開日2022-07-20
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Engineered disulfide reveals structural dynamics of locked SARS-CoV-2 spike.
Plos Pathog., 18, 2022
7XU5
DownloadVisualize
BU of 7xu5 by Molmil
Structure of SARS-CoV-2 D614G Spike Protein with Engineered x3 Disulfide (x3(D427C, V987C) and single Arg S1/S2 cleavage site), Closed Conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ...
著者Qu, K, Chen, Q, Ciazynska, K.A, Liu, B, Zhang, X, Wang, J, He, Y, Guan, J, He, J, Liu, T, Zhang, X, Carter, A.P, Xiong, X, Briggs, J.A.G.
登録日2022-05-18
公開日2022-07-20
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Engineered disulfide reveals structural dynamics of locked SARS-CoV-2 spike.
Plos Pathog., 18, 2022
7XU3
DownloadVisualize
BU of 7xu3 by Molmil
Structure of SARS-CoV-2 Spike Protein with Engineered x3 Disulfide (x3(D427C, V987C) and single Arg S1/S2 cleavage site), Closed Conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ...
著者Qu, K, Chen, Q, Ciazynska, K.A, Liu, B, Zhang, X, Wang, J, He, Y, Guan, J, He, J, Liu, T, Zhang, X, Carter, A.P, Xiong, X, Briggs, J.A.G.
登録日2022-05-18
公開日2022-07-20
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Engineered disulfide reveals structural dynamics of locked SARS-CoV-2 spike.
Plos Pathog., 18, 2022
7XU6
DownloadVisualize
BU of 7xu6 by Molmil
Structure of SARS-CoV-2 Spike Protein with Engineered x3 Disulfide (x3(D427C, V987C) and single Arg S1/S2 cleavage site), incubated in Low pH after 40-Day Storage in PBS, Locked-2 Conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ...
著者Qu, K, Chen, Q, Ciazynska, K.A, Liu, B, Zhang, X, Wang, J, He, Y, Guan, J, He, J, Liu, T, Zhang, X, Carter, A.P, Xiong, X, Briggs, J.A.G.
登録日2022-05-18
公開日2022-07-20
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Engineered disulfide reveals structural dynamics of locked SARS-CoV-2 spike.
Plos Pathog., 18, 2022
9IK4
DownloadVisualize
BU of 9ik4 by Molmil
Cryo-EM structure of Arabidopsis thaliana phosphate transporter PHO1;H1
分子名称: INOSITOL HEXAKISPHOSPHATE, PHOSPHATE ION, Phosphate transporter PHO1 homolog 1
著者Fang, S, Zhang, X, Zhang, P.
登録日2024-06-26
公開日2025-01-22
最終更新日2025-03-05
実験手法ELECTRON MICROSCOPY (3.34 Å)
主引用文献Structural mechanism underlying PHO1;H1-mediated phosphate transport in Arabidopsis.
Nat.Plants, 11, 2025
3LZZ
DownloadVisualize
BU of 3lzz by Molmil
Crystal structures of Cupin superfamily BbDUF985 from Branchiostoma belcheri tsingtauense in apo and GDP-bound forms
分子名称: ACETATE ION, GUANOSINE-5'-DIPHOSPHATE, Putative uncharacterized protein
著者Du, Y, He, Y.-X, Saren, G, Zhang, X, Zhang, S.-C, Chen, Y, Zhou, C.-Z.
登録日2010-03-02
公開日2010-06-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of the apo and GDP-bound forms of a cupin-like protein BbDUF985 from Branchiostoma belcheri tsingtauense
Proteins, 2010
8F49
DownloadVisualize
BU of 8f49 by Molmil
1.8 angstrom structure of apoferritin embedded in crystalline ice
分子名称: Ferritin heavy chain
著者Shi, H, Wu, C, Zhang, X.
登録日2022-11-10
公開日2023-01-11
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (1.8 Å)
主引用文献Addressing compressive deformation of proteins embedded in crystalline ice.
Structure, 31, 2023
8F7Y
DownloadVisualize
BU of 8f7y by Molmil
Structure of Coxsackievirus A10 frozen at -183 degree embedded in crystalline ice
分子名称: Genome polyprotein
著者Shi, H, Wu, C, Zhang, X.
登録日2022-11-21
公開日2023-01-11
最終更新日2025-05-14
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Addressing compressive deformation of proteins embedded in crystalline ice.
Structure, 31, 2023
8EW2
DownloadVisualize
BU of 8ew2 by Molmil
Cryo-EM structure of Aldolase embedded in crystalline ice
分子名称: Fructose-bisphosphate aldolase A
著者Shi, H, Wu, C, Zhang, X.
登録日2022-10-21
公開日2023-01-11
最終更新日2025-05-14
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Addressing compressive deformation of proteins embedded in crystalline ice.
Structure, 31, 2023
8EW0
DownloadVisualize
BU of 8ew0 by Molmil
Cryo-EM structure of glutamate dehydrogenase frozen at various temperature
分子名称: Glutamate dehydrogenase 1, mitochondrial
著者Shi, H, Wu, C, Zhang, X.
登録日2022-10-21
公開日2023-01-11
最終更新日2025-05-21
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Addressing compressive deformation of proteins embedded in crystalline ice.
Structure, 31, 2023
3LOI
DownloadVisualize
BU of 3loi by Molmil
Crystal structures of Cupin superfamily BbDUF985 from Branchiostoma belcheri tsingtauense in the apo and GDP-bound forms
分子名称: Putative uncharacterized protein
著者Zou, C.Z, Du, Y, He, Y.-X, Saren, G, Zhang, X, Chen, Y, Zhang, S.-C.
登録日2010-02-04
公開日2010-06-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of the apo and GDP-bound forms of a cupin-like protein BbDUF985 from Branchiostoma belcheri tsingtauense
Proteins, 2010
8EXE
DownloadVisualize
BU of 8exe by Molmil
Crystal structure of human FAM46A-BCCIPa complex at 3.5 angstrom resolution
分子名称: Isoform 2 of BRCA2 and CDKN1A-interacting protein, Terminal nucleotidyltransferase 5A
著者Liu, S, Zhang, X.
登録日2022-10-25
公開日2023-03-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Inhibition of FAM46/TENT5 activity by BCCIP alpha adopting a unique fold.
Sci Adv, 9, 2023
8EXF
DownloadVisualize
BU of 8exf by Molmil
Crystal structure of human FAM46A-BCCIPa complex at 3.2 angstrom resolution
分子名称: BCCIPa, Terminal nucleotidyltransferase 5A
著者Liu, S, Zhang, X.
登録日2022-10-25
公開日2023-03-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.22 Å)
主引用文献Inhibition of FAM46/TENT5 activity by BCCIP alpha adopting a unique fold.
Sci Adv, 9, 2023
9JF8
DownloadVisualize
BU of 9jf8 by Molmil
Cryo-EM structure of the EXS domain of Arabidopsis thaliana phosphate transporter PHO1;H1
分子名称: PHOSPHATE ION, Phosphate transporter PHO1 homolog 1
著者Fang, S, Zhang, X, Zhang, P.
登録日2024-09-04
公開日2025-01-22
最終更新日2025-03-05
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Structural mechanism underlying PHO1;H1-mediated phosphate transport in Arabidopsis.
Nat.Plants, 11, 2025
4LT5
DownloadVisualize
BU of 4lt5 by Molmil
Structure of a Naegleria Tet-like dioxygenase in complex with 5-methylcytosine DNA
分子名称: 1,2-ETHANEDIOL, DNA, MANGANESE (II) ION, ...
著者Hashimoto, H, Pais, J.E, Zhang, X, Saleh, L, Fu, Z.Q, Dai, N, Correa, I.R, Roberts, R.J, Zheng, Y, Cheng, X.
登録日2013-07-23
公開日2013-12-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.893 Å)
主引用文献Structure of a Naegleria Tet-like dioxygenase in complex with 5-methylcytosine DNA.
Nature, 506, 2014
4M9V
DownloadVisualize
BU of 4m9v by Molmil
Zfp57 mutant (E182Q) in complex with 5-carboxylcytosine DNA
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Liu, Y, Olanrewaju, Y.O, Zhang, X, Cheng, X.
登録日2013-08-15
公開日2013-11-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (0.969 Å)
主引用文献DNA recognition of 5-carboxylcytosine by a zfp57 mutant at an atomic resolution of 0.97 angstrom.
Biochemistry, 52, 2013

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon