Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1WRB
DownloadVisualize
BU of 1wrb by Molmil
Crystal structure of the N-terminal RecA-like domain of DjVLGB, a pranarian Vasa-like RNA helicase
分子名称: DjVLGB, SULFATE ION
著者Kurimoto, K, Muto, Y, Obayashi, N, Terada, T, Shirouzu, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Kigawa, T, Okumura, H, Tanaka, A, Shibata, N, Kashikawa, M, Agata, K, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-10-14
公開日2005-04-12
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of the N-terminal RecA-like domain of a DEAD-box RNA helicase, the Dugesia japonica vasa-like gene B protein
J.Struct.Biol., 150, 2005
3A8S
DownloadVisualize
BU of 3a8s by Molmil
Crystal structure analysis of the fluorescent protein KillerRed
分子名称: KillerRed
著者Sakai, N, Kitago, Y, Takemoto, K, Matsuda, T, Nagai, T.
登録日2009-10-08
公開日2010-04-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure analysis of the fluorescent protein KillerRed
To be Published
2CZR
DownloadVisualize
BU of 2czr by Molmil
Crystal structure of TBP-interacting protein (Tk-TIP26) and implications for its inhibition mechanism of the interaction between TBP and TATA-DNA
分子名称: GLYCEROL, TBP-interacting protein, ZINC ION
著者Yamamoto, T, Matsuda, T, Inoue, T, Matsumura, H, Morikawa, M, Kanaya, S, Kai, Y.
登録日2005-07-15
公開日2006-02-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of TBP-interacting protein (Tk-TIP26) and implications for its inhibition mechanism of the interaction between TBP and TATA-DNA
Protein Sci., 15, 2006
2FYH
DownloadVisualize
BU of 2fyh by Molmil
Solution structure of the 2'-5' RNA ligase-like protein from Pyrococcus furiosus
分子名称: putative integral membrane transport protein
著者Okada, K, Matsuda, T, Sakamoto, T, Muto, Y, Yokoyama, S, Kanai, A, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-02-08
公開日2007-02-20
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Characterization of a heat-stable enzyme possessing GTP-dependent RNA ligase activity from a hyperthermophilic archaeon, Pyrococcus furiosus
Rna, 15, 2009
2ZBG
DownloadVisualize
BU of 2zbg by Molmil
Calcium pump crystal structure with bound AlF4 and TG in the absence of calcium
分子名称: MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, 3ABETA, ...
著者Toyoshima, C, Ogawa, H, Norimatsu, Y.
登録日2007-10-20
公開日2007-12-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献How processing of aspartylphosphate is coupled to lumenal gating of the ion pathway in the calcium pump
Proc.Natl.Acad.Sci.Usa, 104, 2007
1X4S
DownloadVisualize
BU of 1x4s by Molmil
Solution structure of zinc finger HIT domain in protein FON
分子名称: ZINC ION, Zinc finger HIT domain containing protein 2
著者He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-14
公開日2005-11-14
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the zinc finger HIT domain in protein FON
Protein Sci., 16, 2007
2RPP
DownloadVisualize
BU of 2rpp by Molmil
Solution structure of Tandem zinc finger domain 12 in Muscleblind-like protein 2
分子名称: Muscleblind-like protein 2, ZINC ION
著者Abe, C, Dang, W, Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-06-24
公開日2009-05-12
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the RNA binding domain in the human muscleblind-like protein 2
Protein Sci., 18, 2009
2ZBE
DownloadVisualize
BU of 2zbe by Molmil
Calcium pump crystal structure with bound BeF3 in the absence of calcium and TG
分子名称: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1
著者Toyoshima, C, Ogawa, H, Norimatsu, Y.
登録日2007-10-20
公開日2007-12-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献How processing of aspartylphosphate is coupled to lumenal gating of the ion pathway in the calcium pump
Proc.Natl.Acad.Sci.Usa, 104, 2007
2ZBF
DownloadVisualize
BU of 2zbf by Molmil
Calcium pump crystal structure with bound BeF3 and TG in the absence of calcium
分子名称: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, ...
著者Toyoshima, C, Ogawa, H, Norimatsu, Y.
登録日2007-10-20
公開日2007-12-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献How processing of aspartylphosphate is coupled to lumenal gating of the ion pathway in the calcium pump
Proc.Natl.Acad.Sci.Usa, 104, 2007
2RR4
DownloadVisualize
BU of 2rr4 by Molmil
Complex structure of the zf-CW domain and the H3K4me3 peptide
分子名称: Histone H3, ZINC ION, Zinc finger CW-type PWWP domain protein 1
著者He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2010-03-24
公開日2010-09-15
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Structural insight into the zinc finger CW domain as a histone modification reader
Structure, 18, 2010
2AGV
DownloadVisualize
BU of 2agv by Molmil
Crystal structure of the SR CA2+-ATPASE with BHQ and TG
分子名称: 2,5-DITERT-BUTYLBENZENE-1,4-DIOL, OCTANOIC ACID [3S-[3ALPHA, 3ABETA, ...
著者Toyoshima, C, Obara, K, Norimatsu, Y.
登録日2005-07-27
公開日2005-10-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Inaugural Article: Structural role of countertransport revealed in Ca2+ pump crystal structure in the absence of Ca2+.
Proc.Natl.Acad.Sci.USA, 102, 2005
2E61
DownloadVisualize
BU of 2e61 by Molmil
Solution structure of the zf-CW domain in zinc finger CW-type PWWP domain protein 1
分子名称: ZINC ION, Zinc finger CW-type PWWP domain protein 1
著者He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-12-25
公開日2007-06-26
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural insight into the zinc finger CW domain as a histone modification reader
Structure, 18, 2010
2E5S
DownloadVisualize
BU of 2e5s by Molmil
Solution structure of the zf-CCCHx2 domain of muscleblind-like 2, isoform 1 [Homo sapiens]
分子名称: OTTHUMP00000018578, ZINC ION
著者Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-12-22
公開日2007-06-26
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the RNA binding domain in the human muscleblind-like protein 2
Protein Sci., 18, 2009
2DQS
DownloadVisualize
BU of 2dqs by Molmil
Crystal structure of the calcium pump with amppcp in the absence of calcium
分子名称: MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, 3ABETA, ...
著者Toyoshima, C, Norimatsu, Y, Tsueda, J.
登録日2006-05-29
公開日2007-06-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the calcium pump with a bound ATP analogue in the absence of calcium
To be Published
2EAT
DownloadVisualize
BU of 2eat by Molmil
Crystal structure of the SR CA2+-ATPASE with bound CPA and TG
分子名称: (6AR,11AS,11BR)-10-ACETYL-9-HYDROXY-7,7-DIMETHYL-2,6,6A,7,11A,11B-HEXAHYDRO-11H-PYRROLO[1',2':2,3]ISOINDOLO[4,5,6-CD]INDOL-11-ONE, OCTANOIC ACID [3S-[3ALPHA, 3ABETA, ...
著者Takahashi, M, Kondou, Y, Toyoshima, C.
登録日2007-02-02
公開日2007-03-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Interdomain communication in calcium pump as revealed in the crystal structures with transmembrane inhibitors
Proc.Natl.Acad.Sci.Usa, 104, 2007
2EAU
DownloadVisualize
BU of 2eau by Molmil
Crystal structure of the SR CA2+-ATPASE with bound CPA in the presence of curcumin
分子名称: (6AR,11AS,11BR)-10-ACETYL-9-HYDROXY-7,7-DIMETHYL-2,6,6A,7,11A,11B-HEXAHYDRO-11H-PYRROLO[1',2':2,3]ISOINDOLO[4,5,6-CD]INDOL-11-ONE, PHOSPHATIDYLETHANOLAMINE, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1
著者Takahashi, M, Kondou, Y, Toyoshima, C.
登録日2007-02-02
公開日2007-03-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Interdomain communication in calcium pump as revealed in the crystal structures with transmembrane inhibitors
Proc.Natl.Acad.Sci.Usa, 104, 2007
2EAR
DownloadVisualize
BU of 2ear by Molmil
P21 crystal of the SR CA2+-ATPase with bound TG
分子名称: OCTANOIC ACID [3S-[3ALPHA, 3ABETA, 4ALPHA, ...
著者Takahashi, M, Kondou, Y, Toyoshima, C.
登録日2007-02-02
公開日2007-03-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Interdomain communication in calcium pump as revealed in the crystal structures with transmembrane inhibitors
Proc.Natl.Acad.Sci.Usa, 104, 2007
1IVZ
DownloadVisualize
BU of 1ivz by Molmil
Solution structure of the SEA domain from murine hypothetical protein homologous to human mucin 16
分子名称: hypothetical protein 1110008I14RIK
著者Maeda, T, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-04-02
公開日2002-10-02
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of the SEA domain from the murine homologue of ovarian cancer antigen CA125 (MUC16)
J.Biol.Chem., 279, 2004
1IUL
DownloadVisualize
BU of 1iul by Molmil
The structure of cell-free ID.343 from Thermus thermophilus
分子名称: hypothetical protein TT1466
著者Wada, T, Shirouzu, M, Park, S.-Y, Tame, J.R, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-03-05
公開日2003-07-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a conserved CoA-binding protein synthesized by a cell-free system.
Acta Crystallogr.,Sect.D, 59, 2003
6GF6
DownloadVisualize
BU of 6gf6 by Molmil
Molecular basis of egg coat filament cross-linking: high-resolution structure of the partially deglycosylated ZP1 ZP-N1 domain homodimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Zona pellucida sperm-binding protein 1,Zona pellucida sperm-binding protein 1
著者Nishimura, K, Jovine, L.
登録日2018-04-29
公開日2019-06-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility.
Nat Commun, 10, 2019
6GF7
DownloadVisualize
BU of 6gf7 by Molmil
Molecular basis of egg coat filament cross-linking: Zn-SAD structure of the partially deglycosylated ZP1 ZP-N1 domain homodimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ZINC ION, Zona pellucida sperm-binding protein 1,Zona pellucida sperm-binding protein 1
著者Nishimura, K, Jovine, L.
登録日2018-04-29
公開日2019-06-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility.
Nat Commun, 10, 2019
6GF8
DownloadVisualize
BU of 6gf8 by Molmil
Molecular basis of egg coat filament cross-linking: structure of the glycosylated ZP1 ZP-N1 domain homodimer
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Nishimura, K, Jovine, L.
登録日2018-04-29
公開日2019-06-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility.
Nat Commun, 10, 2019
3NK3
DownloadVisualize
BU of 3nk3 by Molmil
Crystal structure of full-length sperm receptor ZP3 at 2.6 A resolution
分子名称: CITRATE ANION, Zona pellucida 3, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose
著者Monne, M, Jovine, L.
登録日2010-06-18
公開日2010-11-10
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Insights into Egg Coat Assembly and Egg-Sperm Interaction from the X-Ray Structure of Full-Length ZP3.
Cell(Cambridge,Mass.), 143, 2010
3NK4
DownloadVisualize
BU of 3nk4 by Molmil
Crystal structure of full-length sperm receptor ZP3 at 2.0 A resolution
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, CITRATE ANION, Zona pellucida 3
著者Monne, M, Jovine, L.
登録日2010-06-18
公開日2010-11-10
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Insights into Egg Coat Assembly and Egg-Sperm Interaction from the X-Ray Structure of Full-Length ZP3.
Cell(Cambridge,Mass.), 143, 2010
4WRN
DownloadVisualize
BU of 4wrn by Molmil
Crystal structure of the polymerization region of human uromodulin/Tamm-Horsfall protein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Maltose-binding periplasmic protein,Uromodulin, ZINC ION, ...
著者Bokhove, M, De Sanctis, D, Jovine, L.
登録日2014-10-24
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献A structured interdomain linker directs self-polymerization of human uromodulin.
Proc.Natl.Acad.Sci.USA, 113, 2016

221371

件を2024-06-19に公開中

PDB statisticsPDBj update infoContact PDBjnumon