Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4GSC
DownloadVisualize
BU of 4gsc by Molmil
Structure analysis of insulin degrading enzyme with compound bdm41559 ((s)-2-[2-(carboxymethyl-phenethyl-amino)-acetylamino]-3-(1h-imidazol-4-yl)-propionic acid methyl ester)
分子名称: Insulin-degrading enzyme, ZINC ION, methyl N-(carboxymethyl)-N-(2-phenylethyl)glycyl-L-histidinate
著者Guo, Q, Deprez-Poulain, R, Deprez, B, Tang, W.J.
登録日2012-08-27
公開日2013-08-28
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Imidazole-derived 2-[N-carbamoylmethyl-alkylamino]acetic acids, substrate-dependent modulators of insulin-degrading enzyme in amyloid-beta hydrolysis.
Eur.J.Med.Chem., 79, 2014
3QZ2
DownloadVisualize
BU of 3qz2 by Molmil
The structure of cysteine-free human insulin degrading enzyme
分子名称: Insulin-degrading enzyme, ZINC ION
著者Guo, Q, Tang, W.J.
登録日2011-03-04
公開日2012-01-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Imidazole-derived 2-[N-carbamoylmethyl-alkylamino]acetic acids, substrate-dependent modulators of insulin-degrading enzyme in amyloid-beta hydrolysis.
Eur.J.Med.Chem., 79, 2014
4DWK
DownloadVisualize
BU of 4dwk by Molmil
Structure of cystein free insulin degrading enzyme with compound bdm41671 ((s)-2-{2-[carboxymethyl-(3-phenyl-propyl)-amino]-acetylamino}-3-(1h-imidazol-4-yl)-propionic acid methyl ester)
分子名称: Insulin-degrading enzyme, ZINC ION, methyl N-(carboxymethyl)-N-(3-phenylpropyl)glycyl-L-histidinate
著者Guo, Q, Deprez-Poulain, R, Deprez, B, Tang, W.J.
登録日2012-02-24
公開日2013-04-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Imidazole-derived 2-[N-carbamoylmethyl-alkylamino]acetic acids, substrate-dependent modulators of insulin-degrading enzyme in amyloid-beta hydrolysis.
Eur.J.Med.Chem., 79, 2014
4DTT
DownloadVisualize
BU of 4dtt by Molmil
Crystal structure of human insulin degrading enzyme (ide) in complex with compund 41367
分子名称: 2-[[2-[[(2S)-3-(3H-IMIDAZOL-4-YL)-1-METHOXY-1-OXO-PROPAN-2-YL]AMINO]-2-OXO-ETHYL]-(PHENYLMETHYL)AMINO]ETHANOIC ACID, Insulin-degrading enzyme, ZINC ION
著者Guo, Q, Deprez-Poulain, R, Deprez, B, Tang, W.J.
登録日2012-02-21
公開日2013-02-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.22 Å)
主引用文献Imidazole-derived 2-[N-carbamoylmethyl-alkylamino]acetic acids, substrate-dependent modulators of insulin-degrading enzyme in amyloid-beta hydrolysis.
Eur.J.Med.Chem., 79, 2014
7ZPP
DownloadVisualize
BU of 7zpp by Molmil
Cryo-EM structure of the MVV CSC intasome at 4.5A resolution
分子名称: Integrase, vDNA, non-transferred strand, ...
著者Ballandras-Colas, A, Maskell, D, Pye, V.E, Locke, J, Swuec, S, Kotecha, A, Costa, A, Cherepanov, P.
登録日2022-04-28
公開日2022-05-11
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献A supramolecular assembly mediates lentiviral DNA integration
Science, 355, 2017
3DNG
DownloadVisualize
BU of 3dng by Molmil
Crystal structure of the complex between MMP-8 and a non-zinc chelating inhibitor
分子名称: (5S)-5-(2-amino-2-oxoethyl)-4-oxo-N-[(3-oxo-3,4-dihydro-2H-1,4-benzoxazin-6-yl)methyl]-3,4,5,6,7,8-hexahydro[1]benzothieno[2,3-d]pyrimidine-2-carboxamide, CALCIUM ION, Neutrophil collagenase, ...
著者Pochetti, G, Montanari, R, Mazza, F.
登録日2008-07-02
公開日2009-03-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Extra Binding Region Induced by Non-Zinc Chelating Inhibitors into the S(1)' Subsite of Matrix Metalloproteinase 8 (MMP-8)
J.Med.Chem., 52, 2009
3DPF
DownloadVisualize
BU of 3dpf by Molmil
Crystal structure of the complex between MMP-8 and a non-zinc chelating inhibitor
分子名称: ACETOHYDROXAMIC ACID, CALCIUM ION, N-{[2-(2-amino-3,4-dioxocyclobut-1-en-1-yl)-1,2,3,4-tetrahydroisoquinolin-7-yl]methyl}-4-oxo-3,5,6,8-tetrahydro-4H-thiopyrano[4',3':4,5]thieno[2,3-d]pyrimidine-2-carboxamide 7,7-dioxide, ...
著者Pochetti, G, Montanari, R, Mazza, F.
登録日2008-07-08
公開日2009-03-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Extra Binding Region Induced by Non-Zinc Chelating Inhibitors into the S(1)' Subsite of Matrix Metalloproteinase 8 (MMP-8)
J.Med.Chem., 52, 2009
3DPE
DownloadVisualize
BU of 3dpe by Molmil
Crystal structure of the complex between MMP-8 and a non-zinc chelating inhibitor
分子名称: CALCIUM ION, N-{[2-(2-amino-3,4-dioxocyclobut-1-en-1-yl)-1,2,3,4-tetrahydroisoquinolin-7-yl]methyl}-4-oxo-3,5,6,8-tetrahydro-4H-thiopyrano[4',3':4,5]thieno[2,3-d]pyrimidine-2-carboxamide 7,7-dioxide, Neutrophil collagenase, ...
著者Pochetti, G, Montanari, R, Mazza, F.
登録日2008-07-08
公開日2009-03-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Extra Binding Region Induced by Non-Zinc Chelating Inhibitors into the S(1)' Subsite of Matrix Metalloproteinase 8 (MMP-8)
J.Med.Chem., 52, 2009
5T3A
DownloadVisualize
BU of 5t3a by Molmil
Maedi-Visna virus (MVV) integrase CCD-CTD (residues 60-275)
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETATE ION, integrase
著者Cook, N.J, Pye, V.E, Cherepanov, P.
登録日2016-08-25
公開日2017-01-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献A supramolecular assembly mediates lentiviral DNA integration.
Science, 355, 2017
2G74
DownloadVisualize
BU of 2g74 by Molmil
Y104F mutant of type 1 isopentenylpyrophosphate-dimethylallylpyrophosphate isomerase
分子名称: Isopentenyl-diphosphate delta-isomerase, MAGNESIUM ION, MANGANESE (II) ION
著者de Ruyck, J, Wouters, J.
登録日2006-02-27
公開日2006-04-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural role for Tyr-104 in Escherichia coli isopentenyl-diphosphate isomerase: site-directed mutagenesis, enzymology, and protein crystallography.
J.Biol.Chem., 281, 2006
2G73
DownloadVisualize
BU of 2g73 by Molmil
Y104F mutant type 1 IPP isomerase complex with EIPP
分子名称: 4-HYDROXY-3-METHYL BUTYL DIPHOSPHATE, Isopentenyl-diphosphate delta-isomerase, MAGNESIUM ION, ...
著者de Ruyck, J, Wouters, J.
登録日2006-02-27
公開日2006-04-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural role for Tyr-104 in Escherichia coli isopentenyl-diphosphate isomerase: site-directed mutagenesis, enzymology, and protein crystallography.
J.Biol.Chem., 281, 2006
3D05
DownloadVisualize
BU of 3d05 by Molmil
Human p53 core domain with hot spot mutation R249S (II)
分子名称: Cellular tumor antigen p53, ZINC ION
著者Suad, O, Rozenberg, H, Shimon, L.J.W, Frolow, F, Shakked, Z.
登録日2008-05-01
公開日2009-01-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis of restoring sequence-specific DNA binding and transactivation to mutant p53 by suppressor mutations
J.Mol.Biol., 385, 2009
6HXY
DownloadVisualize
BU of 6hxy by Molmil
Crystal structure of the head and coiled-coil domains of zebrafish CCDC61
分子名称: Coiled-coil domain-containing protein 61
著者Ochi, T, van Breugel, M.
登録日2018-10-18
公開日2020-04-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献CCDC61/VFL3 Is a Paralog of SAS6 and Promotes Ciliary Functions.
Structure, 28, 2020
6HXT
DownloadVisualize
BU of 6hxt by Molmil
Crystal structure of the head domain of human CCDC61
分子名称: Coiled-coil domain-containing protein 61
著者Ochi, T, Blundell, T.L, van Breugel, M.
登録日2018-10-18
公開日2020-04-29
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献CCDC61/VFL3 Is a Paralog of SAS6 and Promotes Ciliary Functions.
Structure, 28, 2020
6HXV
DownloadVisualize
BU of 6hxv by Molmil
Crystal structure of the head and coiled-coil domains of zebrafish CCDC61 (F129E/D130A)
分子名称: Coiled-coil domain-containing protein 61
著者Barnabas, D, Ochi, T, van Breugel, M.
登録日2018-10-18
公開日2020-04-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献CCDC61/VFL3 Is a Paralog of SAS6 and Promotes Ciliary Functions.
Structure, 28, 2020
4P6Y
DownloadVisualize
BU of 4p6y by Molmil
Crystal structure of the M42 aminopeptidase TmPep1050 from Thermotoga maritima
分子名称: Aminopeptidase
著者Dutoit, R, Demarez, M, Van Elder, D, Bauvois, C.
登録日2014-03-25
公開日2015-04-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the M42 aminopeptidase TmPep1050 from Thermotoga maritima
To Be Published
4RMW
DownloadVisualize
BU of 4rmw by Molmil
Crystal structure of the D76A Beta-2 Microglobulin mutant
分子名称: ACETATE ION, Beta-2-microglobulin, TRIETHYLENE GLYCOL
著者de Rosa, M, Bolognesi, M, Ricagno, S.
登録日2014-10-22
公開日2015-11-18
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Conformational dynamics in crystals reveal the molecular bases for D76N beta-2 microglobulin aggregation propensity.
Nat Commun, 9, 2018
4RMU
DownloadVisualize
BU of 4rmu by Molmil
Crystal structure of the D76E Beta-2 Microglobulin mutant
分子名称: Beta-2-microglobulin, TRIETHYLENE GLYCOL
著者de Rosa, M, Bolognesi, M, Ricagno, S.
登録日2014-10-22
公開日2015-11-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Conformational dynamics in crystals reveal the molecular bases for D76N beta-2 microglobulin aggregation propensity.
Nat Commun, 9, 2018
4RMV
DownloadVisualize
BU of 4rmv by Molmil
Crystal structure of the D76H Beta-2 Microglobulin mutant
分子名称: ACETATE ION, Beta-2-microglobulin, TRIETHYLENE GLYCOL
著者de Rosa, M, Bolognesi, M, Ricagno, S.
登録日2014-10-22
公開日2015-11-18
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.463 Å)
主引用文献Conformational dynamics in crystals reveal the molecular bases for D76N beta-2 microglobulin aggregation propensity.
Nat Commun, 9, 2018
3M1O
DownloadVisualize
BU of 3m1o by Molmil
Human Transthyretin (TTR) complexed with 2-((3,5-dichloro-4-hydroxyphenyl)amino)benzoic acid
分子名称: 2-[(3,5-dichloro-4-hydroxyphenyl)amino]benzoic acid, Transthyretin
著者Kolstoe, S.E, Wood, S.P.
登録日2010-03-05
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Trapping of palindromic ligands within native transthyretin prevents amyloid formation.
Proc.Natl.Acad.Sci.USA, 107, 2010
3NA4
DownloadVisualize
BU of 3na4 by Molmil
D53P beta-2 microglobulin mutant
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Beta-2-microglobulin
著者Azinas, S, Ricagno, S, Bolognesi, M.
登録日2010-06-01
公開日2011-06-01
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献D-strand perturbation and amyloid propensity in beta-2 microglobulin
Febs J., 278, 2011
1XUC
DownloadVisualize
BU of 1xuc by Molmil
Matrix metalloproteinase-13 complexed with non-zinc binding inhibitor
分子名称: CALCIUM ION, Collagenase 3, N,N'-BIS(3-METHYLBENZYL)PYRIMIDINE-4,6-DICARBOXAMIDE, ...
著者Engel, C.K, Wendt, K.U.
登録日2004-10-26
公開日2005-10-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for the highly selective inhibition of MMP-13
Chem.Biol., 12, 2005
1XUD
DownloadVisualize
BU of 1xud by Molmil
Matrix metalloproteinase-13 complexed with non-zinc binding inhibitor
分子名称: CALCIUM ION, Collagenase 3, N,N'-BIS(4-FLUORO-3-METHYLBENZYL)PYRIMIDINE-4,6-DICARBOXAMIDE, ...
著者Engel, C.K, Wendt, K.U.
登録日2004-10-26
公開日2005-10-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for the highly selective inhibition of MMP-13.
Chem.Biol., 12, 2005
1XUR
DownloadVisualize
BU of 1xur by Molmil
Matrix metalloproteinase-13 complexed with non-zinc binding inhibitor
分子名称: CALCIUM ION, Collagenase 3, N,N'-BIS(PYRIDIN-3-YLMETHYL)PYRIMIDINE-4,6-DICARBOXAMIDE, ...
著者Engel, C.K, Wendt, K.U.
登録日2004-10-26
公開日2005-10-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis for the highly selective inhibition of MMP-13.
Chem.Biol., 12, 2005
2B2K
DownloadVisualize
BU of 2b2k by Molmil
structure of Y104F IDI-1 mutant in complex with EIPP
分子名称: 4-HYDROXY-3-METHYL BUTYL DIPHOSPHATE, Isopentenyl-diphosphate delta-isomerase, MAGNESIUM ION, ...
著者Wouters, J.
登録日2005-09-19
公開日2006-09-05
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural role for Tyr-104 in Escherichia coli isopentenyl-diphosphate isomerase: site-directed mutagenesis, enzymology, and protein crystallography
J.Biol.Chem., 281, 2006

227344

件を2024-11-13に公開中

PDB statisticsPDBj update infoContact PDBjnumon