7KPW
| Structure of the H-lobe of yeast CKM | 分子名称: | Mediator of RNA polymerase II transcription subunit 12 | 著者 | Li, Y.C, Chao, T.C, Kim, H.J, Cholko, T, Chen, S.F, Nakanishi, K, Chang, C.E, Murakami, K, Garcia, B.A, Boyer, T.G, Tsai, K.L. | 登録日 | 2020-11-12 | 公開日 | 2021-01-27 | 最終更新日 | 2024-03-06 | 実験手法 | ELECTRON MICROSCOPY (4.9 Å) | 主引用文献 | Structure and noncanonical Cdk8 activation mechanism within an Argonaute-containing Mediator kinase module. Sci Adv, 7, 2021
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7KPX
| Structure of the yeast CKM | 分子名称: | Mediator of RNA polymerase II transcription subunit 12, Mediator of RNA polymerase II transcription subunit 13, Meiotic mRNA stability protein kinase SSN3, ... | 著者 | Li, Y.C, Chao, T.C, Kim, H.J, Cholko, T, Chen, S.F, Nakanishi, K, Chang, C.E, Murakami, K, Garcia, B.A, Boyer, T.G, Tsai, K.L. | 登録日 | 2020-11-12 | 公開日 | 2021-01-27 | 最終更新日 | 2024-03-06 | 実験手法 | ELECTRON MICROSCOPY (4.4 Å) | 主引用文献 | Structure and noncanonical Cdk8 activation mechanism within an Argonaute-containing Mediator kinase module. Sci Adv, 7, 2021
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7KPV
| Structure of kinase and Central lobes of yeast CKM | 分子名称: | Mediator of RNA polymerase II transcription subunit 12, Mediator of RNA polymerase II transcription subunit 13, Meiotic mRNA stability protein kinase SSN3, ... | 著者 | Li, Y.C, Chao, T.C, Kim, H.J, Cholko, T, Chen, S.F, Nakanishi, K, Chang, C.E, Murakami, K, Garcia, B.A, Boyer, T.G, Tsai, K.L. | 登録日 | 2020-11-12 | 公開日 | 2021-01-27 | 最終更新日 | 2024-03-06 | 実験手法 | ELECTRON MICROSCOPY (3.8 Å) | 主引用文献 | Structure and noncanonical Cdk8 activation mechanism within an Argonaute-containing Mediator kinase module. Sci Adv, 7, 2021
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4NHG
| Crystal Structure of 2G12 IgG Dimer | 分子名称: | 2G12 IgG dimer heavy chain, 2G12 IgG dimer light chain, Hepatitis B virus receptor binding protein | 著者 | Wu, Y, West Jr, A.P, Kim, H.J, Thornton, M.E, Ward, A.B, Bjorkman, P.J. | 登録日 | 2013-11-05 | 公開日 | 2014-02-26 | 最終更新日 | 2019-07-17 | 実験手法 | X-RAY DIFFRACTION (8.001 Å) | 主引用文献 | Structural basis for enhanced HIV-1 neutralization by a dimeric immunoglobulin G form of the glycan-recognizing antibody 2G12. Cell Rep, 5, 2013
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3X2Y
| Crystal structure of metallo-beta-lactamase H8A from Thermotoga maritima | 分子名称: | NICKEL (II) ION, UPF0173 metal-dependent hydrolase TM_1162 | 著者 | Choi, H.J, Kim, H.J, Matsuura, A, Mikami, B, Yoon, H.J, Lee, H.H. | 登録日 | 2015-01-07 | 公開日 | 2016-02-17 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.67 Å) | 主引用文献 | Crystal structure of metallo-beta-lactamase H8A from Thermotoga maritima To be Published
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3X30
| Crystal structure of metallo-beta-lactamase from Thermotoga maritima | 分子名称: | MANGANESE (II) ION, NICKEL (II) ION, UPF0173 metal-dependent hydrolase TM_1162 | 著者 | Choi, H.J, Kim, H.J, Matsuura, A, Mikami, B, Yoon, H.J, Lee, H.H. | 登録日 | 2015-01-07 | 公開日 | 2016-02-17 | 実験手法 | X-RAY DIFFRACTION (1.921 Å) | 主引用文献 | Crystal structure of metallo-beta-lactamase from Thermotoga maritima To be Published
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3X2X
| Crystal structure of metallo-beta-lactamase H48A from Thermotoga maritima | 分子名称: | MANGANESE (II) ION, UPF0173 metal-dependent hydrolase TM_1162 | 著者 | Choi, H.J, Kim, H.J, Matsuura, A, Mikami, B, Yoon, H.J, Lee, H.H. | 登録日 | 2015-01-07 | 公開日 | 2016-02-17 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (3.42 Å) | 主引用文献 | Crystal structure of metallo-beta-lactamase H48A from Thermotoga maritima To be Published
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3X2Z
| Crystal structure of metallo-beta-lactamase in complex with nickel from Thermotoga maritima | 分子名称: | NICKEL (II) ION, UPF0173 metal-dependent hydrolase TM_1162 | 著者 | Choi, H.J, Kim, H.J, Matsuura, A, Mikami, B, Yoon, H.J, Lee, H.H. | 登録日 | 2015-01-07 | 公開日 | 2016-02-17 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.33 Å) | 主引用文献 | Crystal structure of metallo-beta-lactamase in complex with nickel from Thermotoga maritima To be Published
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8I9M
| The RAGE and HMGB1 complex | 分子名称: | Advanced glycosylation end product-specific receptor, High mobility group protein B1 | 著者 | Han, C.W, Kim, H.J. | 登録日 | 2023-02-07 | 公開日 | 2024-02-14 | 実験手法 | ELECTRON MICROSCOPY (5.19 Å) | 主引用文献 | The RAGE and HMGB1 complex To Be Published
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5IPW
| oligopeptide-binding protein OppA | 分子名称: | Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein, putative | 著者 | Lee, H.H, Kim, H.J, Yoon, H.J. | 登録日 | 2016-03-10 | 公開日 | 2017-03-15 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Crystal structure of a putative oligopeptide-binding periplasmic protein from a hyperthermophile Extremophiles, 20, 2016
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4ZZ7
| Crystal structure of methylmalonate-semialdehyde dehydrogenase (DddC) from Oceanimonas doudoroffii | 分子名称: | Methylmalonate-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE | 著者 | Do, H, Lee, C.W, Lee, S.G, Kang, H, Park, C.M, Kim, H.J, Park, H, Park, H, Lee, J.H. | 登録日 | 2015-05-22 | 公開日 | 2016-04-06 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | Crystal structure and modeling of the tetrahedral intermediate state of methylmalonate-semialdehyde dehydrogenase (MMSDH) from Oceanimonas doudoroffii. J. Microbiol., 54, 2016
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4J4L
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7ML3
| General transcription factor TFIIH (weak binding) | 分子名称: | BJ4_G0050160.mRNA.1.CDS.1, General transcription and DNA repair factor IIH, General transcription and DNA repair factor IIH helicase subunit XPB, ... | 著者 | Yang, C, Fujiwara, R, Kim, H.J, Gorbea Colon, J.J, Steimle, S, Garcia, B.A, Murakami, K. | 登録日 | 2021-04-27 | 公開日 | 2022-02-02 | 最終更新日 | 2022-02-16 | 実験手法 | ELECTRON MICROSCOPY (7.6 Å) | 主引用文献 | Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II. Mol.Cell, 82, 2022
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7ML1
| RNA polymerase II pre-initiation complex (PIC2) | 分子名称: | BJ4_G0050160.mRNA.1.CDS.1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ... | 著者 | Yang, C, Fujiwara, R, Kim, H.J, Gorbea Colon, J.J, Steimle, S, Garcia, B.A, Murakami, K. | 登録日 | 2021-04-27 | 公開日 | 2022-02-02 | 最終更新日 | 2022-02-16 | 実験手法 | ELECTRON MICROSCOPY (4 Å) | 主引用文献 | Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II. Mol.Cell, 82, 2022
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7ML2
| RNA polymerase II pre-initiation complex (PIC3) | 分子名称: | BJ4_G0004860.mRNA.1.CDS.1, BJ4_G0050160.mRNA.1.CDS.1, DNA-directed RNA polymerase II subunit RPB11, ... | 著者 | Yang, C, Fujiwara, R, Kim, H.J, Gorbea Colon, J.J, Steimle, S, Garcia, B.A, Murakami, K. | 登録日 | 2021-04-27 | 公開日 | 2022-02-02 | 最終更新日 | 2022-02-16 | 実験手法 | ELECTRON MICROSCOPY (3.4 Å) | 主引用文献 | Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II. Mol.Cell, 82, 2022
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7ML4
| RNA polymerase II initially transcribing complex (ITC) | 分子名称: | BJ4_G0050160.mRNA.1.CDS.1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ... | 著者 | Yang, C, Fujiwara, R, Kim, H.J, Gorbea Colon, J.J, Steimle, S, Garcia, B.A, Murakami, K. | 登録日 | 2021-04-27 | 公開日 | 2022-02-02 | 最終更新日 | 2022-03-09 | 実験手法 | ELECTRON MICROSCOPY (3.1 Å) | 主引用文献 | Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II. Mol.Cell, 82, 2022
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7ML0
| RNA polymerase II pre-initiation complex (PIC1) | 分子名称: | BJ4_G0050160.mRNA.1.CDS.1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ... | 著者 | Yang, C, Fujiwara, R, Kim, H.J, Gorbea Colon, J.J, Steimle, S, Garcia, B.A, Murakami, K. | 登録日 | 2021-04-27 | 公開日 | 2022-02-02 | 最終更新日 | 2022-02-16 | 実験手法 | ELECTRON MICROSCOPY (3 Å) | 主引用文献 | Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II. Mol.Cell, 82, 2022
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5Y7D
| Crystal structure of human Endothelial-overexpressed LPS associated factor 1 | 分子名称: | CHLORIDE ION, GLYCEROL, Protein CXorf40A, ... | 著者 | Park, S.H, Kim, M.J, Park, J.S, Kim, H.J, Han, B.W. | 登録日 | 2017-08-17 | 公開日 | 2018-08-22 | 最終更新日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (1.71 Å) | 主引用文献 | Crystal Structure of Human EOLA1 Implies Its Possibility of RNA Binding. Molecules, 24, 2019
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2HK1
| Crystal structure of D-psicose 3-epimerase (DPEase) in the presence of D-fructose | 分子名称: | D-PSICOSE 3-EPIMERASE, D-fructose, MANGANESE (II) ION | 著者 | Kim, K, Kim, H.J, Oh, D.K, Cha, S.S, Rhee, S. | 登録日 | 2006-07-03 | 公開日 | 2006-08-29 | 最終更新日 | 2017-10-18 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Crystal Structure of d-Psicose 3-epimerase from Agrobacterium tumefaciens and its Complex with True Substrate d-Fructose: A Pivotal Role of Metal in Catalysis, an Active Site for the Non-phosphorylated Substrate, and its Conformational Changes J.Mol.Biol., 361, 2006
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2HK0
| Crystal structure of D-psicose 3-epimerase (DPEase) in the absence of substrate | 分子名称: | D-PSICOSE 3-EPIMERASE | 著者 | Kim, K, Kim, H.J, Oh, D.K, Cha, S.S, Rhee, S. | 登録日 | 2006-07-03 | 公開日 | 2006-08-29 | 最終更新日 | 2017-10-18 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal Structure of d-Psicose 3-epimerase from Agrobacterium tumefaciens and its Complex with True Substrate d-Fructose: A Pivotal Role of Metal in Catalysis, an Active Site for the Non-phosphorylated Substrate, and its Conformational Changes J.Mol.Biol., 361, 2006
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3UYV
| Crystal structure of a glycosylated ice-binding protein (LeIBP) from Arctic yeast | 分子名称: | Antifreeze protein, alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 著者 | Lee, J.H, Park, A.K, Do, H, Park, K.S, Moh, S.H, Chi, Y.M, Kim, H.J. | 登録日 | 2011-12-06 | 公開日 | 2012-02-29 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.43 Å) | 主引用文献 | Structural basis for the antifreeze activity of an ice-binding protein from an Arctic yeast. J.Biol.Chem., 2012
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3UYU
| Structural basis for the antifreeze activity of an ice-binding protein (LeIBP) from Arctic yeast | 分子名称: | Antifreeze protein, GLYCEROL | 著者 | Lee, J.H, Park, A.K, Do, H, Park, K.S, Moh, S.H, Chi, Y.M, Kim, H.J. | 登録日 | 2011-12-06 | 公開日 | 2012-02-15 | 実験手法 | X-RAY DIFFRACTION (1.57 Å) | 主引用文献 | Structural basis for the antifreeze activity of an ice-binding protein from an Arctic yeast. J.Biol.Chem., 2012
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5XWB
| Crystal Structure of 5-Enolpyruvulshikimate-3-phosphate Synthase from a Psychrophilic Bacterium, Colwellia psychrerythraea | 分子名称: | 3-phosphoshikimate 1-carboxyvinyltransferase | 著者 | Lee, J.H, Kim, H.J, Choi, J.M, Kim, D.-W, Seo, Y.-S. | 登録日 | 2017-06-29 | 公開日 | 2017-09-06 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Crystal structure of 5-enolpyruvylshikimate-3-phosphate synthase from a psychrophilic bacterium, Colwellia psychrerythraea 34H. Biochem. Biophys. Res. Commun., 492, 2017
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1PVE
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4NUH
| Crystal structure of mLeIBP, a capping head region swapped mutant of ice-binding protein | 分子名称: | DI(HYDROXYETHYL)ETHER, ice-binding protein | 著者 | Do, H, Kim, S.J, Lee, S.G, Park, H, Kim, H.J, Lee, J.H. | 登録日 | 2013-12-03 | 公開日 | 2014-04-16 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (1.34 Å) | 主引用文献 | Structure-based characterization and antifreeze properties of a hyperactive ice-binding protein from the Antarctic bacterium Flavobacterium frigoris PS1 Acta Crystallogr.,Sect.D, 70, 2014
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