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THREE-DIMENSIONAL STRUCTURE OF THE D153G MUTANT OF E. COLI ALKALINE PHOSPHATASE: A MUTANT WITH WEAKER MAGNESIUM BINDING AND INCREASED CATALYTIC ACTIVITY
分子名称:	ALKALINE PHOSPHATASE
著者	Dealwis, C.G, Chen, L, Abad-Zapatero, C.
登録日	1995-08-19
公開日	1995-11-14
最終更新日	2024-10-09
実験手法	X-RAY DIFFRACTION (2.5 Å)
主引用文献	Crystallographic analysis of reversible metal binding observed in a mutant (Asp153-->Gly) of Escherichia coli alkaline phosphatase. Biochemistry, 34, 1995

5FKI

Pseudorabies virus (PrV) nuclear egress complex proteins fitted as a hexameric lattice into a sub-tomogram average derived from focused- ion beam milled lamellae electron cryo-microscopic data
分子名称:	CHLORIDE ION, UL31, UL34 protein, ...
著者	Hagen, C, Dent, K.C, Zeev Ben Mordehai, T, Vasishtan, D, Antonin, W, Mettenleiter, T.C, Gruenewald, K.
登録日	2015-10-16
公開日	2016-03-16
最終更新日	2024-10-23
実験手法	ELECTRON MICROSCOPY (35 Å)
主引用文献	Crystal Structure of the Herpesvirus Nuclear Egress Complex Provides Insights Into Inner Nuclear Membrane Remodelling Cell Rep., 13, 2015

8QMP

Structure of the E2 Beryllium Fluoride Complex of the Autoinhibited Calcium ATPase ACA8
分子名称:	BERYLLIUM TRIFLUORIDE ION, Calcium-transporting ATPase 8, plasma membrane-type, ...
著者	Thirup Larsen, S, Karlsen Dannersoe, J, Nissen, P.
登録日	2023-09-25
公開日	2024-10-02
最終更新日	2024-10-23
実験手法	ELECTRON MICROSCOPY (3.3 Å)
主引用文献	Conserved N-terminal Regulation of the ACA8 Calcium Pump with Two Calmodulin Binding Sites. J.Mol.Biol., 436, 2024

3C6T

Crystal Structure of HIV Reverse Transcriptase in complex with inhibitor 14
分子名称:	2-[3-chloro-5-(3-chloro-5-cyanophenoxy)phenoxy]-N-(2-chloro-4-sulfamoylphenyl)acetamide, Reverse transcriptase
著者	Yan, Y, Prasad, S.
登録日	2008-02-05
公開日	2008-04-22
最終更新日	2023-08-30
実験手法	X-RAY DIFFRACTION (2.7 Å)
主引用文献	The design and synthesis of diaryl ether second generation HIV-1 non-nucleoside reverse transcriptase inhibitors (NNRTIs) with enhanced potency versus key clinical mutations. Bioorg.Med.Chem.Lett., 18, 2008

1RAX

RA-DOMAIN OF RAL GUANOSINE-NUCLEOTIDE DISSOCIATION STIMULATOR
分子名称:	PROTEIN (RA-DOMAIN OF RAL GUANOSINE DISSOCIATION STIMULATOR)
著者	Mueller, T.D, Handel, L, Schmieder, P, Oschkinat, H.
登録日	1999-03-13
公開日	1999-03-19
最終更新日	2023-12-27
実験手法	SOLUTION NMR
主引用文献	High-Resolution Structure of the Ra-Domain of Human Ralgds and a Dynamics Study of its Binding Loop to Ras To be Published

5E2T

Crystal structure of anti-TAU antibody AT8 FAB
分子名称:	AT8 HEAVY CHAIN, AT8 LIGHT CHAIN, CALCIUM ION
著者	Malia, T, Teplyakov, A.
登録日	2015-10-01
公開日	2016-02-24
最終更新日	2024-10-16
実験手法	X-RAY DIFFRACTION (2.1 Å)
主引用文献	Epitope mapping and structural basis for the recognition of phosphorylated tau by the anti-tau antibody AT8. Proteins, 84, 2016

3C6U

Crystal Structure of HIV Reverse Transcriptase in complex with inhibitor 22
分子名称:	3-chloro-5-[2-chloro-5-(1H-indazol-3-ylmethoxy)phenoxy]benzonitrile, Reverse transcriptase
著者	Yan, Y, Prasad, S.
登録日	2008-02-05
公開日	2008-04-22
最終更新日	2023-08-30
実験手法	X-RAY DIFFRACTION (2.7 Å)
主引用文献	The design and synthesis of diaryl ether second generation HIV-1 non-nucleoside reverse transcriptase inhibitors (NNRTIs) with enhanced potency versus key clinical mutations. Bioorg.Med.Chem.Lett., 18, 2008

5AQ5

Structure of the Carboxy-Terminal Domain of the Bacteriophage T5 L- Shaped Tail Fibre
分子名称:	L-SHAPED TAIL FIBER PROTEIN PB8
著者	Garcia-Doval, C, Granell, M, van Raaij, M.J.
登録日	2015-09-19
公開日	2015-12-16
最終更新日	2024-01-10
実験手法	X-RAY DIFFRACTION (2.3 Å)
主引用文献	Structure of the Receptor-Binding Carboxy-Terminal Domain of the Bacteriophage T5 L-Shaped Tail Fibre with and without Its Intra-Molecular Chaperone. Viruses, 7, 2015

8H2A

Crystal structure of alcohol dehydrogenase from Formosa agariphila
分子名称:	Alcohol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
著者	Brott, S, Bornscheuer, U.T, Nam, K.H.
登録日	2022-10-05
公開日	2023-10-18
最終更新日	2024-10-30
実験手法	X-RAY DIFFRACTION (2.5 Å)
主引用文献	Unique alcohol dehydrogenases involved in algal sugar utilization by marine bacteria Appl.Microbiol.Biotechnol., 107, 2023

8H2B

Crystal structure of alcohol dehydrogenase from Zobellia galactanivorans
分子名称:	Alcohol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION, ...
著者	Brott, S, Bornscheuer, U.T, Nam, K.H.
登録日	2022-10-05
公開日	2023-10-18
最終更新日	2024-10-30
実験手法	X-RAY DIFFRACTION (2.1 Å)
主引用文献	Unique alcohol dehydrogenases involved in algal sugar utilization by marine bacteria Appl.Microbiol.Biotechnol., 107, 2023

3QUZ

Structure of the mouse CD1d-NU-alpha-GalCer-iNKT TCR complex
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
著者	Li, Y, Girardi, E, Yu, E.D, Zajonc, D.M.
登録日	2011-02-24
公開日	2011-06-29
最終更新日	2024-10-16
実験手法	X-RAY DIFFRACTION (2.3 Å)
主引用文献	Galactose-modified iNKT cell agonists stabilized by an induced fit of CD1d prevent tumour metastasis. Embo J., 30, 2011

3QUY

Structure of the mouse CD1d-BnNH-GSL-1'-iNKT TCR complex
分子名称:	(2S,3R,4S,5R,6S)-6-[(2S,3S,4R)-2-(hexacosanoylamino)-3,4-dihydroxy-octadecoxy]-3,4,5-trihydroxy-N-(phenylmethyl)oxane-2-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者	Li, Y, Girardi, E, Yu, E.D, Zajonc, D.M.
登録日	2011-02-24
公開日	2011-06-29
最終更新日	2024-10-09
実験手法	X-RAY DIFFRACTION (2.25 Å)
主引用文献	Galactose-modified iNKT cell agonists stabilized by an induced fit of CD1d prevent tumour metastasis. Embo J., 30, 2011

4G56

Crystal Structure of full length PRMT5/MEP50 complexes from Xenopus laevis
分子名称:	Hsl7 protein, MGC81050 protein, S-ADENOSYL-L-HOMOCYSTEINE
著者	Ho, M, Wilczek, C, Bonanno, J, Shechter, D, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
登録日	2012-07-17
公開日	2012-10-03
最終更新日	2024-10-30
実験手法	X-RAY DIFFRACTION (2.95 Å)
主引用文献	Structure of the arginine methyltransferase PRMT5-MEP50 reveals a mechanism for substrate specificity Plos One, 8, 2013

5O5D

Cellobiohydrolase Cel7A from T. atroviride
分子名称:	2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
著者	Borisova, A.S, Stahlberg, J, Hansson, H.
登録日	2017-06-01
公開日	2018-01-31
最終更新日	2024-11-06
実験手法	X-RAY DIFFRACTION (1.72 Å)
主引用文献	Correlation of structure, function and protein dynamics in GH7 cellobiohydrolases from Trichoderma atroviride, T. reesei and T. harzianum. Biotechnol Biofuels, 11, 2018

3QUX

Structure of the mouse CD1d-alpha-C-GalCer-iNKT TCR complex
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
著者	Li, Y, Girardi, E, Yu, E.D, Zajonc, D.M.
登録日	2011-02-24
公開日	2011-06-29
最終更新日	2024-11-06
実験手法	X-RAY DIFFRACTION (2.91 Å)
主引用文献	Galactose-modified iNKT cell agonists stabilized by an induced fit of CD1d prevent tumour metastasis. Embo J., 30, 2011

5O59

Cellobiohydrolase Cel7A from T. atroviride
分子名称:	1-thio-beta-D-glucopyranose, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者	Borisova, A.S, Stahlberg, J, Hansson, H.
登録日	2017-06-01
公開日	2018-01-31
最終更新日	2024-10-23
実験手法	X-RAY DIFFRACTION (1.75 Å)
主引用文献	Correlation of structure, function and protein dynamics in GH7 cellobiohydrolases from Trichoderma atroviride, T. reesei and T. harzianum. Biotechnol Biofuels, 11, 2018

2N8L

Zipcode-binding-protein-1 KH3KH4(DD) domains in complex with the KH3 RNA target
分子名称:	Insulin-like growth factor 2 mRNA-binding protein 1, RNA (5'-R(PGPCPAPCPAPCPCPC)-3')
著者	Nicastro, G, Candel, A.M, Ramos, A, Hollingworth, D.
登録日	2015-10-21
公開日	2017-01-25
最終更新日	2024-05-15
実験手法	SOLUTION NMR
主引用文献	Zipcode-binding-protein-1 KH3KH4(DD) domains in complex with the RNA target GCACACCC To be Published

2N8M

Zipcode-binding-protein-1 KH3(DD)KH4 domains in complex with the KH4 RNA target
分子名称:	Insulin-like growth factor 2 mRNA-binding protein 1, RNA (5'-R(PUPCPGPGPAPCP*U)-3')
著者	Nicastro, G, Ramos, A, Candel, A, Hollingworth, D.
登録日	2015-10-21
公開日	2017-01-25
最終更新日	2024-05-15
実験手法	SOLUTION NMR
主引用文献	Zipcode-binding-protein-1 KH3(DD)KH4 domains in complex with the RNA target UCGGACU To be Published

2Z9Q

Transfer RNA in the hybrid P/E state
分子名称:	tRNA
著者	Frank, J, Li, W.
登録日	2007-09-25
公開日	2007-10-16
最終更新日	2024-03-13
実験手法	ELECTRON MICROSCOPY (11.7 Å)
主引用文献	Transfer RNA in the hybrid P/E state To be Published

5U6D

Polycomb protein EED in complex with inhibitor: 2-[4-(4-{(3S,4R)-4-(dimethylamino)-1-[(2-fluoro-6-methylphenyl)methyl]pyrrolidin-3-yl}phenyl)-1H-pyrazol-1-yl]acetamide
分子名称:	2-[4-(4-{(3S,4R)-4-(dimethylamino)-1-[(2-fluoro-6-methylphenyl)methyl]pyrrolidin-3-yl}phenyl)-1H-pyrazol-1-yl]acetamide, Polycomb protein EED
著者	Jakob, C.G, Zhu, H.
登録日	2016-12-07
公開日	2017-03-15
最終更新日	2023-10-04
実験手法	X-RAY DIFFRACTION (1.64 Å)
主引用文献	SAR of amino pyrrolidines as potent and novel protein-protein interaction inhibitors of the PRC2 complex through EED binding. Bioorg. Med. Chem. Lett., 27, 2017

5UXH

Structure of Human POFUT1 in complex with GDP-fucose
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose, GDP-fucose protein O-fucosyltransferase 1, GUANOSINE-5'-DIPHOSPHATE-BETA-L-FUCOPYRANOSE
著者	Xu, X, McMillan, B, Blacklow, S.C.
登録日	2017-02-22
公開日	2017-04-05
最終更新日	2024-10-09
実験手法	X-RAY DIFFRACTION (2.41 Å)
主引用文献	Structure of human POFUT1, its requirement in ligand-independent oncogenic Notch signaling, and functional effects of Dowling-Degos mutations. Glycobiology, 27, 2017

2M4Q

NMR structure of E. coli ribosomela decoding site with apramycin
分子名称:	APRAMYCIN, RNA (27-MER)
著者	Puglisi, J.D, Tsai, A, Marshall, R, Viani, E.
登録日	2013-02-10
公開日	2013-03-20
最終更新日	2024-05-01
実験手法	SOLUTION NMR
主引用文献	The impact of aminoglycosides on the dynamics of translation elongation. Cell Rep, 3, 2013

5WNS

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称:	16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者	DeMirci, H.
登録日	2017-08-01
公開日	2018-02-21
最終更新日	2025-02-12
実験手法	X-RAY DIFFRACTION (3.5 Å)
主引用文献	2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation. Nat. Struct. Mol. Biol., 25, 2018

5WNR

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
分子名称:	16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者	DeMirci, H.
登録日	2017-08-01
公開日	2018-02-21
最終更新日	2025-02-12
実験手法	X-RAY DIFFRACTION (3.5 Å)
主引用文献	2'-O-methylation in mRNA disrupts tRNA decoding during translation elongation. Nat. Struct. Mol. Biol., 25, 2018

2BQW

CRYSTAL STRUCTURE OF FACTOR XA IN COMPLEX WITH COMPOUND 45
分子名称:	1-{2-[(4-CHLOROPHENYL)AMINO]-2-OXOETHYL}-N-(1-ISOPROPYLPIPERIDIN-4-YL)-1H-INDOLE-2-CARBOXAMIDE, CALCIUM ION, COAGULATION FACTOR X, ...
著者	Nazare, M, Will, D.W, Matter, H, Schreuder, H, Ritter, K, Urmann, M, Essrich, M, Bauer, A, Wagner, M, Czech, J, Laux, V, Wehner, V.
登録日	2005-04-28
公開日	2006-04-26
最終更新日	2024-10-16
実験手法	X-RAY DIFFRACTION (2.95 Å)
主引用文献	Probing the Subpockets of Factor Xa Reveals Two Binding Modes for Inhibitors Based on a 2-Carboxyindole Scaffold: A Study Combining Structure-Activity Relationship and X-Ray Crystallography. J.Med.Chem., 48, 2005

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