Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4QR3
DownloadVisualize
BU of 4qr3 by Molmil
Brd4 Bromodomain 1 complex with its novel inhibitors
分子名称: Bromodomain-containing protein 4, N-cyclopentyl-3-(2-oxo-2,3-dihydro-1,3-thiazol-4-yl)benzenesulfonamide
著者Xiong, B, Cao, D.Y, Chen, T.T, Xu, Y.C.
登録日2014-06-30
公開日2015-07-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.374 Å)
主引用文献Fragment-based drug discovery of 2-thiazolidinones as BRD4 inhibitors: 2. Structure-based optimization
J.Med.Chem., 58, 2015
6L8N
DownloadVisualize
BU of 6l8n by Molmil
Crystal structure of the K. lactis Rad5
分子名称: DNA repair protein RAD5, ZINC ION
著者Shen, M, Xiang, S.
登録日2019-11-06
公開日2020-11-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structural basis for the multi-activity factor Rad5 in replication stress tolerance.
Nat Commun, 12, 2021
6L8R
DownloadVisualize
BU of 6l8r by Molmil
membrane-bound PD-L1-CD
分子名称: Programmed cell death 1 ligand 1
著者Maorong, W, Cao, Y, Bin, W, Bo, O.
登録日2019-11-07
公開日2020-11-11
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献PD-L1 degradation is regulated by electrostatic membrane association of its cytoplasmic domain.
Nat Commun, 12, 2021
6LS4
DownloadVisualize
BU of 6ls4 by Molmil
A novel anti-tumor agent S-40 in complex with tubulin
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[(4-cyclopropylphenyl)sulfonylamino]-4-methyl-N-(pyridin-3-ylmethyl)benzamide, GLYCEROL, ...
著者Du, T, Lin, S, Ji, M, Xue, N, Liu, Y, Zhang, K, Lu, D, Chen, X, Xu, H.
登録日2020-01-17
公開日2021-01-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A novel orally active microtubule destabilizing agent S-40 targets the colchicine-binding site and shows potent antitumor activity.
Cancer Lett., 495, 2020
5GV2
DownloadVisualize
BU of 5gv2 by Molmil
Crystal structure of Arginine-bound CASTOR1 from Homo sapiens
分子名称: ARGININE, GATS-like protein 3, MAGNESIUM ION
著者Gai, Z.C, Wu, G.
登録日2016-09-01
公開日2017-09-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Structural mechanism for the arginine sensing and regulation of CASTOR1 in the mTORC1 signaling pathway
Cell Discov, 2, 2016
4RSU
DownloadVisualize
BU of 4rsu by Molmil
Crystal structure of the light and hvem complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCEROL, ...
著者Liu, W, Ramagoal, U.A, Himmel, D, Bonanno, J.B, Nathenson, S.G, Almo, S.C, Atoms-to-Animals: The Immune Function Network (IFN), New York Structural Genomics Research Consortium (NYSGRC)
登録日2014-11-11
公開日2015-02-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献HVEM structures and mutants reveal distinct functions of binding to LIGHT and BTLA/CD160.
J.Exp.Med., 218, 2021
3M45
DownloadVisualize
BU of 3m45 by Molmil
Crystal structure of Ig1 domain of mouse SynCAM 2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cell adhesion molecule 2
著者Yue, L, Modis, Y.
登録日2010-03-10
公開日2010-09-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献N-glycosylation at the SynCAM (synaptic cell adhesion molecule) immunoglobulin interface modulates synaptic adhesion.
J.Biol.Chem., 285, 2010
5ISY
DownloadVisualize
BU of 5isy by Molmil
Crystal structure of Nudix family protein with NAD
分子名称: NADH pyrophosphatase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
著者Zhang, D, Guan, Z, Zou, T, Yin, P.
登録日2016-03-15
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.354 Å)
主引用文献Structural basis of prokaryotic NAD-RNA decapping by NudC
Cell Res., 26, 2016
8JD9
DownloadVisualize
BU of 8jd9 by Molmil
Cyro-EM structure of the Na+/H+ antipoter SOS1 from Arabidopsis thaliana,class1
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Sodium/hydrogen exchanger 7
著者Yang, G.H, Zhang, Y.M, Zhou, J.Q, Jia, Y.T, Xu, X, Fu, P, Wu, H.Y.
登録日2023-05-13
公開日2023-11-08
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (2.87 Å)
主引用文献Structural basis for the activity regulation of Salt Overly Sensitive 1 in Arabidopsis salt tolerance.
Nat.Plants, 9, 2023
7YFG
DownloadVisualize
BU of 7yfg by Molmil
Structure of the Rat GluN1-GluN2C NMDA receptor in complex with glycine and glutamate (major class in asymmetry)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLUTAMIC ACID, ...
著者Zhang, M, Zhang, J, Guo, F, Li, Y, Zhu, S.
登録日2022-07-08
公開日2023-03-29
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits.
Nat.Struct.Mol.Biol., 30, 2023
7YFM
DownloadVisualize
BU of 7yfm by Molmil
Structure of GluN1b-GluN2D NMDA receptor in complex with agonists glycine and glutamate.
分子名称: Glutamate receptor ionotropic, NMDA 2D, Isoform 6 of Glutamate receptor ionotropic, ...
著者Zhang, J.L, Zhu, S.J, Zhang, M.
登録日2022-07-08
公開日2023-03-29
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (5.1 Å)
主引用文献Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits.
Nat.Struct.Mol.Biol., 30, 2023
7YFH
DownloadVisualize
BU of 7yfh by Molmil
Structure of the Rat GluN1-GluN2C NMDA receptor in complex with glycine, glutamate and (R)-PYD-106
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLUTAMIC ACID, ...
著者Zhang, M, Zhang, J, Guo, F, Li, Y, Zhu, S.
登録日2022-07-08
公開日2023-03-29
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits.
Nat.Struct.Mol.Biol., 30, 2023
7YFF
DownloadVisualize
BU of 7yff by Molmil
Structure of GluN1a-GluN2D NMDA receptor in complex with agonist glycine and competitive antagonist CPP.
分子名称: (2R)-4-(3-phosphonopropyl)piperazine-2-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zhang, J.L, Zhu, S.J, Zhang, M.
登録日2022-07-08
公開日2023-04-12
最終更新日2023-08-02
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits.
Nat.Struct.Mol.Biol., 30, 2023
7YFL
DownloadVisualize
BU of 7yfl by Molmil
Structure of GluN1a-GluN2D NMDA receptor in complex with agonists glycine and glutamate.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLUTAMIC ACID, ...
著者Zhang, J.L, Zhu, S.J, Zhang, M.
登録日2022-07-08
公開日2023-04-12
最終更新日2023-08-02
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits.
Nat.Struct.Mol.Biol., 30, 2023
7YFO
DownloadVisualize
BU of 7yfo by Molmil
Structure of GluN1a E698C-GluN2D NMDA receptor in cystines crosslinked state.
分子名称: Glutamate receptor ionotropic, NMDA 1, NMDA 2D
著者Zhang, J.L, Zhu, S.J, Zhang, M.
登録日2022-07-08
公開日2023-04-12
最終更新日2023-08-02
実験手法ELECTRON MICROSCOPY (6.4 Å)
主引用文献Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits.
Nat.Struct.Mol.Biol., 30, 2023
7YFR
DownloadVisualize
BU of 7yfr by Molmil
Structure of GluN1a E698C-GluN2D NMDA receptor in cystines non-crosslinked state.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLUTAMIC ACID, ...
著者Zhang, J.L, Zhu, S.J, Zhang, M.
登録日2022-07-09
公開日2023-04-12
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (5.1 Å)
主引用文献Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits.
Nat.Struct.Mol.Biol., 30, 2023
5WFN
DownloadVisualize
BU of 5wfn by Molmil
Revised model of leiomodin 2-mediated actin regulation (alternate refinement of PDB 4RWT)
分子名称: Actin-5C, Leiomodin-2, MAGNESIUM ION, ...
著者Yurtsever, Z, Eck, M.J, Dominguez, R.
登録日2017-07-12
公開日2017-08-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of leiomodin 2 in complex with actin: a structural and functional reexamination
Biophys.J., 113, 2017
8XZD
DownloadVisualize
BU of 8xzd by Molmil
The structure of fox ACE2 and Omicron BF.7 RBD complex
分子名称: Angiotensin-converting enzyme, Spike protein S1, ZINC ION
著者sun, J.Q.
登録日2024-01-21
公開日2024-06-12
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献The binding and structural basis of fox ACE2 to RBDs from different sarbecoviruses.
Virol Sin, 39, 2024
8XYZ
DownloadVisualize
BU of 8xyz by Molmil
The structure of fox ACE2 and PT RBD complex
分子名称: Angiotensin-converting enzyme, Signal peptide, Spike protein S1, ...
著者sun, J.Q.
登録日2024-01-20
公開日2024-07-03
最終更新日2024-09-11
実験手法ELECTRON MICROSCOPY (2.96 Å)
主引用文献The binding and structural basis of fox ACE2 to RBDs from different sarbecoviruses.
Virol Sin, 39, 2024
8Y0Y
DownloadVisualize
BU of 8y0y by Molmil
Cryo-EM structure of the 123-316 scDb/PT-RBD complex
分子名称: 123-316 scDb, 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Jia, G.W, Tong, Z, Tong, J.Y, Su, Z.M.
登録日2024-01-23
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (2.86 Å)
主引用文献Deciphering a reliable synergistic bispecific strategy of rescuing antibodies for SARS-CoV-2 escape variants, including BA.2.86, EG.5.1, and JN.1.
Cell Rep, 43, 2024
7YFI
DownloadVisualize
BU of 7yfi by Molmil
Structure of the Rat tri-heteromeric GluN1-GluN2A-GluN2C NMDA receptor in complex with glycine and glutamate
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLUTAMIC ACID, ...
著者Zhang, M, Zhang, J, Guo, F, Li, Y, Zhu, S.
登録日2022-07-08
公開日2023-03-29
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits.
Nat.Struct.Mol.Biol., 30, 2023
8SNX
DownloadVisualize
BU of 8snx by Molmil
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) bound to the leader promoter
分子名称: Phosphoprotein, RNA (5'-R(*UP*UP*UP*UP*UP*CP*GP*CP*GP*U)-3'), RNA-directed RNA polymerase L
著者Cao, D, Gao, Y, Chen, Z, Gooneratne, I, Roesler, C, Mera, C, Liang, B.
登録日2023-04-28
公開日2023-12-20
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures of the promoter-bound respiratory syncytial virus polymerase.
Nature, 625, 2024
8SNY
DownloadVisualize
BU of 8sny by Molmil
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) bound to the trailer complementary promoter
分子名称: Phosphoprotein, RNA (5'-R(*UP*UP*UP*UP*UP*CP*UP*CP*GP*U)-3'), RNA-directed RNA polymerase L
著者Cao, D, Gao, Y, Chen, Z, Gooneratne, I, Roesler, C, Mera, C, Liang, B.
登録日2023-04-28
公開日2023-12-20
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (3.41 Å)
主引用文献Structures of the promoter-bound respiratory syncytial virus polymerase.
Nature, 625, 2024
3D34
DownloadVisualize
BU of 3d34 by Molmil
Structure of the F-spondin domain of mindin
分子名称: CALCIUM ION, NICKEL (II) ION, Spondin-2
著者Li, Y, Mariuzza, R.A.
登録日2008-05-09
公開日2009-02-17
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the F-spondin domain of mindin, an integrin ligand and pattern recognition molecule.
Embo J., 28, 2009
8HWT
DownloadVisualize
BU of 8hwt by Molmil
SARS-CoV-2 Omicron BA.2 RBD complexed with BD-604 and S304 Fab
分子名称: BD-604 heavy chain, BD-604 light chain, S304 heavy chain, ...
著者He, Q.W, Xie, Y.
登録日2023-01-02
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (2.91 Å)
主引用文献An updated atlas of antibody evasion by SARS-CoV-2 Omicron sub-variants including BQ.1.1 and XBB.
Cell Rep Med, 4, 2023

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon