Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6QGB
DownloadVisualize
BU of 6qgb by Molmil
Crystal structure of Ideonella sakaiensis MHETase bound to benzoic acid
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, BENZOIC ACID, CALCIUM ION, ...
著者Palm, G.J, Reisky, L, Boettcher, D, Mueller, H, Michels, E.A.P, Walczak, C, Berndt, L, Weiss, M.S, Bornscheuer, U.T, Weber, G.
登録日2019-01-10
公開日2019-04-03
最終更新日2019-04-24
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of the plastic-degrading Ideonella sakaiensis MHETase bound to a substrate.
Nat Commun, 10, 2019
3USV
DownloadVisualize
BU of 3usv by Molmil
Structure of the precursor of a thermostable variant of papain at 3.8 A resolution from a crystal soaked at pH 4
分子名称: Papain
著者Roy, S, Choudhury, D, Biswas, S, Dattagupta, J.K.
登録日2011-11-24
公開日2012-11-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Crystallographic analysis of pro-papain variant elucidates the structural basis of the step-wise activation mechanism of the zymogen
To be Published
3UC9
DownloadVisualize
BU of 3uc9 by Molmil
Crystal Structure of Yeast Irc6p - A Novel Type of Conserved Clathrin Accessory Protein
分子名称: Increased recombination centers protein 6
著者Gorynia, S, Payne, G.S, Cascio, D, Sawaya, M.R.
登録日2011-10-26
公開日2012-09-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Yeast Irc6p is a novel type of conserved clathrin coat accessory factor related to small G proteins.
Mol Biol Cell, 23, 2012
3UWV
DownloadVisualize
BU of 3uwv by Molmil
Crystal structure of Staphylococcus Aureus triosephosphate isomerase complexed with 2-phosphoglyceric acid
分子名称: 2-PHOSPHOGLYCERIC ACID, SODIUM ION, Triosephosphate isomerase
著者Mukherjee, S, Roychowdhury, A, Dutta, D, Das, A.K.
登録日2011-12-03
公開日2012-10-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Crystal structures of triosephosphate isomerase from methicillin resistant Staphylococcus aureus MRSA252 provide structural insights into novel modes of ligand binding and unique conformations of catalytic loop
Biochimie, 94, 2012
4ONF
DownloadVisualize
BU of 4onf by Molmil
Fab fragment of 3D6 in complex with amyloid beta 1-7
分子名称: 3D6 FAB ANTIBODY HEAVY CHAIN, 3D6 FAB ANTIBODY LIGHT CHAIN, Amyloid beta A4 protein
著者Feinberg, H, Saldanha, J.W, Diep, L, Goel, A, Widom, A, Veldman, G.M, Weis, W.I, Schenk, D, Basi, G.S.
登録日2014-01-28
公開日2014-06-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure reveals conservation of amyloid-beta conformation recognized by 3D6 following humanization to bapineuzumab.
Alzheimers Res Ther, 6, 2014
3UE7
DownloadVisualize
BU of 3ue7 by Molmil
X-ray crystal structure of a novel topological analogue of crambin
分子名称: Crambin, D-Crambin
著者Mandal, K, Pentelute, B.L, Bang, D, Gates, Z.P, Torbeev, V.Y, Kent, S.B.H.
登録日2011-10-28
公開日2012-02-08
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Design, total chemical synthesis, and x-ray structure of a protein having a novel linear-loop polypeptide chain topology.
Angew.Chem.Int.Ed.Engl., 51, 2012
3URJ
DownloadVisualize
BU of 3urj by Molmil
Type IV native endothiapepsin
分子名称: Endothiapepsin, SULFATE ION
著者Bailey, D, Cooper, J.B.
登録日2011-11-22
公開日2012-04-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献An analysis of subdomain orientation, conformational change and disorder in relation to crystal packing of aspartic proteinases.
Acta Crystallogr.,Sect.D, 68, 2012
4O6N
DownloadVisualize
BU of 4o6n by Molmil
Structure of AF2299, a CDP-alcohol phosphotransferase (CDP-bound)
分子名称: AF2299, a CDP-alcohol phosphotransferase, CALCIUM ION, ...
著者Clarke, O.B, Sciara, G, Tomasek, D, Banerjee, S, Rajashankar, K.R, Shapiro, L, Mancia, F, New York Consortium on Membrane Protein Structure (NYCOMPS)
登録日2013-12-22
公開日2014-05-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for catalysis in a CDP-alcohol phosphotransferase.
Nat Commun, 5, 2014
3UE6
DownloadVisualize
BU of 3ue6 by Molmil
The dark structure of the blue-light photoreceptor Aureochrome1 LOV
分子名称: Aureochrome1, FLAVIN MONONUCLEOTIDE, PHOSPHATE ION
著者Mitra, D, Yang, X, Moffat, K.
登録日2011-10-28
公開日2012-04-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal structures of Aureochrome1 LOV suggest new design strategies for optogenetics.
Structure, 20, 2012
3UWZ
DownloadVisualize
BU of 3uwz by Molmil
Crystal structure of Staphylococcus aureus triosephosphate isomerase complexed with glycerol-2-phosphate
分子名称: 2-HYDROXY-1-(HYDROXYMETHYL)ETHYL DIHYDROGEN PHOSPHATE, PHOSPHATE ION, Triosephosphate isomerase
著者Mukherjee, S, Roychowdhury, A, Dutta, D, Das, A.K.
登録日2011-12-03
公開日2012-10-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of triosephosphate isomerase from methicillin resistant Staphylococcus aureus MRSA252 provide structural insights into novel modes of ligand binding and unique conformations of catalytic loop
Biochimie, 94, 2012
3UQ4
DownloadVisualize
BU of 3uq4 by Molmil
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) mutant F247L (F16L)
分子名称: Gamma-aminobutyric-acid receptor subunit beta-1, SODIUM ION
著者Gonzalez-Gutierrez, G, Lukk, T, Agarwal, V, Papke, D, Nair, S.K, Grosman, C.
登録日2011-11-19
公開日2012-04-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Mutations that stabilize the open state of the Erwinia chrisanthemi ligand-gated ion channel fail to change the conformation of the pore domain in crystals.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UTB
DownloadVisualize
BU of 3utb by Molmil
Crystal Structure of Nucleosome Core Particle Assembled with the 146b Alpha-Satellite Sequence (NCP146b)
分子名称: 146-mer DNA, Histone H2A, Histone H2B 1.1, ...
著者Chua, E.Y.D, Vasudevan, D, Davey, G.E, Wu, B, Davey, C.A.
登録日2011-11-25
公開日2012-04-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The mechanics behind DNA sequence-dependent properties of the nucleosome
Nucleic Acids Res., 40, 2012
3URI
DownloadVisualize
BU of 3uri by Molmil
Endothiapepsin-DB5 complex.
分子名称: DB5 peptide, Endothiapepsin
著者Bailey, D, Sanz-Aparicio, J, Albert, A, Cooper, J.B.
登録日2011-11-22
公開日2012-04-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献An analysis of subdomain orientation, conformational change and disorder in relation to crystal packing of aspartic proteinases.
Acta Crystallogr.,Sect.D, 68, 2012
3US8
DownloadVisualize
BU of 3us8 by Molmil
Crystal Structure of an isocitrate dehydrogenase from Sinorhizobium meliloti 1021
分子名称: Isocitrate dehydrogenase [NADP], SULFATE ION
著者Kumaran, D, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, LaFleur, J, Seidel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
登録日2011-11-23
公開日2011-12-14
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal Structure of an isocitrate dehydrogenase from Sinorhizobium meliloti 1021
To be Published
3UWW
DownloadVisualize
BU of 3uww by Molmil
Crystal structure of Staphylococcus Aureus triosephosphate isomerase complexed with 3-phosphoglyceric acid
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 3-PHOSPHOGLYCERIC ACID, SODIUM ION, ...
著者Mukherjee, S, Roychowdhury, A, Dutta, D, Das, A.K.
登録日2011-12-03
公開日2012-10-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structures of triosephosphate isomerase from methicillin resistant Staphylococcus aureus MRSA252 provide structural insights into novel modes of ligand binding and unique conformations of catalytic loop
Biochimie, 94, 2012
3UWB
DownloadVisualize
BU of 3uwb by Molmil
Crystal structure of a probable peptide deformylase from strucynechococcus phage S-SSM7 in complex with actinonin
分子名称: 1,2-ETHANEDIOL, ACTINONIN, CHLORIDE ION, ...
著者Lorimer, D, Abendroth, J, Edwards, T.E, Burgin, A, Segall, A, Rohwer, F.
登録日2011-12-01
公開日2013-01-09
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and function of a cyanophage-encoded peptide deformylase.
ISME J, 7, 2013
3UWL
DownloadVisualize
BU of 3uwl by Molmil
Crystal structure of Enteroccocus faecalis thymidylate synthase (EfTS) in complex with 5-formyl tetrahydrofolate
分子名称: 1,2-ETHANEDIOL, N-[4-({[(6S)-2-amino-5-formyl-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid, SULFATE ION, ...
著者Pozzi, C, Catalano, A, Cortesi, D, Luciani, R, Ferrari, S, Fritz, T, Costi, M.P, Mangani, S.
登録日2011-12-02
公開日2012-08-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献The structure of Enterococcus faecalis thymidylate synthase provides clues about folate bacterial metabolism.
Acta Crystallogr.,Sect.D, 68, 2012
3V1O
DownloadVisualize
BU of 3v1o by Molmil
Crystal structures of the reverse transcriptase-associated ribonuclease H domain of xenotropic murine leukemia-virus related virus
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, GLYCEROL, Reverse transcriptase/ribonuclease H p80, ...
著者Zhou, D, Wlodawer, A.
登録日2011-12-09
公開日2012-03-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.876 Å)
主引用文献Crystal structures of the reverse transcriptase-associated ribonuclease H domain of xenotropic murine leukemia-virus related virus.
J.Struct.Biol., 177, 2012
3UFZ
DownloadVisualize
BU of 3ufz by Molmil
Crystal structure of a Trp-less green fluorescent protein translated by the universal genetic code
分子名称: Green fluorescent protein
著者Kawahara-Kobayashi, A, Araiso, Y, Matsuda, T, Yokoyama, S, Kigawa, T, Nureki, O, Kiga, D.
登録日2011-11-02
公開日2012-10-17
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Simplification of the genetic code: restricted diversity of genetically encoded amino acids.
Nucleic Acids Res., 40, 2012
3UGT
DownloadVisualize
BU of 3ugt by Molmil
Crystal structure of the yeast mitochondrial threonyl-tRNA synthetase - orthorhombic crystal form
分子名称: Threonyl-tRNA synthetase, mitochondrial, ZINC ION
著者Peterson, K.M, Ling, J, Simonovic, I, Cho, C, Soll, D, Simonovic, M.
登録日2011-11-02
公開日2012-02-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Yeast mitochondrial threonyl-tRNA synthetase recognizes tRNA isoacceptors by distinct mechanisms and promotes CUN codon reassignment.
Proc.Natl.Acad.Sci.USA, 109, 2012
3ULB
DownloadVisualize
BU of 3ulb by Molmil
Crystal structure of the pleckstrin homology domain of Saccharomyces cerevisiae Avo1, a TORC2 subunit, in the P212121 crystal form
分子名称: Target of rapamycin complex 2 subunit AVO1
著者Pan, D, Matsuura, Y.
登録日2011-11-10
公開日2012-04-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of the pleckstrin homology domain of Saccharomyces cerevisiae Avo1 and its human orthologue Sin1, an essential subunit of TOR complex 2
Acta Crystallogr.,Sect.F, 68, 2012
3UIL
DownloadVisualize
BU of 3uil by Molmil
Crystal Structure of the complex of PGRP-S with lauric acid at 2.2 A resolution
分子名称: GLYCEROL, LAURIC ACID, Peptidoglycan recognition protein 1
著者Dube, D, Sharma, P, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
登録日2011-11-05
公開日2012-07-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of the binding of fatty acids to peptidoglycan recognition protein, PGRP-S through second binding site
Arch.Biochem.Biophys., 529, 2013
6QVS
DownloadVisualize
BU of 6qvs by Molmil
Unliganded structure of the human wild type Beta-galactoside alpha-2,6-sialyltransferase 1 (ST6Gal1)
分子名称: Beta-galactoside alpha-2,6-sialyltransferase 1, DI(HYDROXYETHYL)ETHER, GLYCEROL
著者Harrus, D, Glumoff, T.
登録日2019-03-04
公開日2020-06-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Unliganded and CMP-Neu5Ac bound structures of human alpha-2,6-sialyltransferase ST6Gal I at high resolution.
J.Struct.Biol., 212, 2020
3UQ5
DownloadVisualize
BU of 3uq5 by Molmil
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) mutant L240A F247L (L9A F16L) in the presence of 10 mM cysteamine
分子名称: Gamma-aminobutyric-acid receptor subunit beta-1, SODIUM ION
著者Gonzalez-Gutierrez, G, Lukk, T, Agarwal, V, Papke, D, Nair, S.K, Grosman, C.
登録日2011-11-19
公開日2012-04-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Mutations that stabilize the open state of the Erwinia chrisanthemi ligand-gated ion channel fail to change the conformation of the pore domain in crystals.
Proc.Natl.Acad.Sci.USA, 109, 2012
6QPH
DownloadVisualize
BU of 6qph by Molmil
Dunaliella minimal PSI complex
分子名称: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ...
著者Klaiman, D, Caspy, I, Nelson, N.
登録日2019-02-14
公開日2020-02-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structure of a minimal photosystem I from the green alga Dunaliella salina.
Nat.Plants, 6, 2020

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon