Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8YJH
DownloadVisualize
BU of 8yjh by Molmil
Structure of the human endogenous PCNA-FEN1 complex - State A
分子名称: 5 prime DNA, Flap endonuclease 1, Proliferating cell nuclear antigen, ...
著者Tian, Y, Gao, N.
登録日2024-03-01
公開日2024-12-04
最終更新日2025-01-29
実験手法ELECTRON MICROSCOPY (3.68 Å)
主引用文献Structural insight into Okazaki fragment maturation mediated by PCNA-bound FEN1 and RNaseH2.
Embo J., 44, 2025
7EEA
DownloadVisualize
BU of 7eea by Molmil
Cyanophage Pam1 tailspike receptor-binding domain
分子名称: Short-tailed cyanophage tailspike receptor-binding domain
著者Zhang, J.T, Jiang, Y.L, Zhou, C.Z.
登録日2021-03-18
公開日2021-10-20
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.671 Å)
主引用文献Structure and assembly pattern of a freshwater short-tailed cyanophage Pam1.
Structure, 30, 2022
7ELG
DownloadVisualize
BU of 7elg by Molmil
LC3B modificated with a covalent probe
分子名称: 2-methylidene-5-thiophen-2-yl-cyclohexane-1,3-dione, Microtubule-associated proteins 1A/1B light chain 3B, SULFATE ION
著者Fan, S, Wan, W.
登録日2021-04-10
公開日2021-10-13
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献Inhibition of Autophagy by a Small Molecule through Covalent Modification of the LC3 Protein.
Angew.Chem.Int.Ed.Engl., 60, 2021
7EEL
DownloadVisualize
BU of 7eel by Molmil
Cyanophage Pam1 capsid asymmetric unit
分子名称: Cement (decoration) proteins, Major capsid proteins
著者Zhang, J.T, Jiang, Y.L, Zhou, C.Z.
登録日2021-03-19
公開日2021-10-20
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Structure and assembly pattern of a freshwater short-tailed cyanophage Pam1.
Structure, 30, 2022
7EEQ
DownloadVisualize
BU of 7eeq by Molmil
Cyanophage Pam1 tail machine
分子名称: Needle head proteins, Tailspike head-binding domain
著者Zhang, J.T, Jiang, Y.L, Zhou, C.Z.
登録日2021-03-19
公開日2021-10-20
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.96 Å)
主引用文献Structure and assembly pattern of a freshwater short-tailed cyanophage Pam1.
Structure, 30, 2022
7EEP
DownloadVisualize
BU of 7eep by Molmil
Cyanophage Pam1 portal-adaptor complex
分子名称: Pam1 adaptor proteins, Pam1 portal proteins
著者Zhang, J.T, Jiang, Y.L, Zhou, C.Z.
登録日2021-03-19
公開日2021-10-20
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Structure and assembly pattern of a freshwater short-tailed cyanophage Pam1.
Structure, 30, 2022
7CKQ
DownloadVisualize
BU of 7ckq by Molmil
The cryo-EM structure of B. subtilis BmrR transcription activation complex
分子名称: DNA (50-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Fang, C.L, Zhang, Y.
登録日2020-07-18
公開日2020-12-16
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献The bacterial multidrug resistance regulator BmrR distorts promoter DNA to activate transcription.
Nat Commun, 11, 2020
7EW1
DownloadVisualize
BU of 7ew1 by Molmil
Cryo-EM structure of siponimod -bound Sphingosine-1-phosphate receptor 5 in complex with Gi protein
分子名称: 1-[[4-[(~{E})-~{N}-[[4-cyclohexyl-3-(trifluoromethyl)phenyl]methoxy]-~{C}-methyl-carbonimidoyl]-2-ethyl-phenyl]methyl]azetidine-3-carboxylic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Yuan, Y, Jia, G.W, Shao, Z.H, Su, Z.M.
登録日2021-05-24
公開日2021-09-29
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures of signaling complexes of lipid receptors S1PR1 and S1PR5 reveal mechanisms of activation and drug recognition.
Cell Res., 31, 2021
7EW7
DownloadVisualize
BU of 7ew7 by Molmil
Cryo-EM structure of SEW2871-bound Sphingosine-1-phosphate receptor 1 in complex with Gi protein
分子名称: 5-[4-phenyl-5-(trifluoromethyl)thiophen-2-yl]-3-[3-(trifluoromethyl)phenyl]-1,2,4-oxadiazole, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Jia, G.W, Yuan, Y, Su, Z.M, Shao, Z.H.
登録日2021-05-24
公開日2021-09-29
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.27 Å)
主引用文献Structures of signaling complexes of lipid receptors S1PR1 and S1PR5 reveal mechanisms of activation and drug recognition.
Cell Res., 31, 2021
7EVZ
DownloadVisualize
BU of 7evz by Molmil
Cryo-EM structure of cenerimod -bound Sphingosine-1-phosphate receptor 1 in complex with Gi protein
分子名称: (2~{S})-3-[4-[5-(2-cyclopentyl-6-methoxy-pyridin-4-yl)-1,2,4-oxadiazol-3-yl]-2-ethyl-6-methyl-phenoxy]propane-1,2-diol, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Yuan, Y, Jia, G.W, Shao, Z.H, Su, Z.M.
登録日2021-05-24
公開日2021-09-29
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (3.07 Å)
主引用文献Structures of signaling complexes of lipid receptors S1PR1 and S1PR5 reveal mechanisms of activation and drug recognition.
Cell Res., 31, 2021
7EW0
DownloadVisualize
BU of 7ew0 by Molmil
Cryo-EM structure of ozanimod -bound Sphingosine-1-phosphate receptor 1 in complex with Gi protein
分子名称: 5-[3-[(1~{S})-1-(2-hydroxyethylamino)-2,3-dihydro-1~{H}-inden-4-yl]-1,2,4-oxadiazol-5-yl]-2-propan-2-yloxy-benzenecarbonitrile, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Yuan, Y, Jia, G.W, Su, Z.M, Shao, Z.H.
登録日2021-05-24
公開日2021-09-29
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Structures of signaling complexes of lipid receptors S1PR1 and S1PR5 reveal mechanisms of activation and drug recognition.
Cell Res., 31, 2021
7EVY
DownloadVisualize
BU of 7evy by Molmil
Cryo-EM structure of siponimod -bound Sphingosine-1-phosphate receptor 1 in complex with Gi protein
分子名称: 1-[[4-[(~{E})-~{N}-[[4-cyclohexyl-3-(trifluoromethyl)phenyl]methoxy]-~{C}-methyl-carbonimidoyl]-2-ethyl-phenyl]methyl]azetidine-3-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者Jia, G.W, Yuan, Y, Su, Z.M, Shao, Z.H.
登録日2021-05-24
公開日2021-09-29
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献Structures of signaling complexes of lipid receptors S1PR1 and S1PR5 reveal mechanisms of activation and drug recognition.
Cell Res., 31, 2021
7W1I
DownloadVisualize
BU of 7w1i by Molmil
Crystal structure of carboxylesterase mutant from Thermobifida fusca with C8X and C9C
分子名称: 4-(2-hydroxyethyloxycarbonyl)benzoic acid, Carboxylesterase, bis(2-hydroxyethyl) benzene-1,4-dicarboxylate
著者Han, X, Gerlis, H, Li, Z, Gao, J, Wei, R, Liu, W.
登録日2021-11-19
公開日2022-11-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Structural Insights into (Tere)phthalate-Ester Hydrolysis by a Carboxylesterase and Its Role in Promoting PET Depolymerization
Acs Catalysis, 12, 2022
7W1J
DownloadVisualize
BU of 7w1j by Molmil
Crystal structure of carboxylesterase from Thermobifida fusca with J1K
分子名称: 4-(2-hydroxyethylcarbamoyl)benzoic acid, Carboxylesterase
著者Han, X, Gerlis, H, Li, Z, Gao, J, Wei, R, Liu, W.
登録日2021-11-19
公開日2022-11-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural Insights into (Tere)phthalate-Ester Hydrolysis by a Carboxylesterase and Its Role in Promoting PET Depolymerization
Acs Catalysis, 12, 2022
7W1K
DownloadVisualize
BU of 7w1k by Molmil
Crystal structure of carboxylesterase from Thermobifida fusca
分子名称: Carboxylesterase
著者Han, X, Gerlis, H, Li, Z, Gao, J, Wei, R, Liu, W.
登録日2021-11-19
公開日2022-11-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Structural Insights into (Tere)phthalate-Ester Hydrolysis by a Carboxylesterase and Its Role in Promoting PET Depolymerization
Acs Catalysis, 12, 2022
7W1L
DownloadVisualize
BU of 7w1l by Molmil
Crystal structure of carboxylesterase mutant from Thermobifida fusca with C8X
分子名称: Carboxylesterase, bis(2-hydroxyethyl) benzene-1,4-dicarboxylate
著者Han, X, Gerlis, H, Li, Z, Gao, J, Wei, R, Liu, W.
登録日2021-11-19
公開日2022-11-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Structural Insights into (Tere)phthalate-Ester Hydrolysis by a Carboxylesterase and Its Role in Promoting PET Depolymerization
Acs Catalysis, 12, 2022
5YLX
DownloadVisualize
BU of 5ylx by Molmil
Integrated illustration of a valid epitope based on the SLA class I structure and tetramer technique could carry forward the development of molecular vaccine in swine species
分子名称: Beta-2-microglobulin, MHC class I antigen, PRRSV-NSP9-TMP9 peptide
著者Pan, X.C, Wei, X.H, Zhang, N, Xia, C.
登録日2017-10-20
公開日2018-10-24
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Illumination of PRRSV Cytotoxic T Lymphocyte Epitopes by the Three-Dimensional Structure and Peptidome of Swine Lymphocyte Antigen Class I (SLA-I).
Front Immunol, 10, 2019
6IH5
DownloadVisualize
BU of 6ih5 by Molmil
Crystal structure of Phosphite Dehydrogenase mutant I151R/P176E from Ralstonia sp. 4506 in complex with non-natural cofactor Nicotinamide Cytosine dinucleotide
分子名称: Phosphite dehydrogenase, [[(2S,3S,4R,5S)-5-(3-aminocarbonylpyridin-1-ium-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2S,3S,4R,5S)-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
著者Song, X, Feng, Y, Liu, Y, Zhao, Z.
登録日2018-09-28
公開日2019-03-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.468 Å)
主引用文献Structural Insights into Phosphite Dehydrogenase Variants Favoring a Non-natural Redox Cofactor
Acs Catalysis, 9, 2019
6IJ1
DownloadVisualize
BU of 6ij1 by Molmil
Crystal structure of a protein from Actinoplanes
分子名称: ACETATE ION, IMIDAZOLE, Prenylcyclase
著者Yang, Z.Z, Zhang, L.L, Liu, W.D, Chen, C.C, Guo, R.T.
登録日2018-10-08
公開日2019-09-11
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.521 Å)
主引用文献Crystal structure of TchmY from Actinoplanes teichomyceticus.
Acta Crystallogr.,Sect.F, 75, 2019
6IQD
DownloadVisualize
BU of 6iqd by Molmil
Crystal structure of Alcohol dehydrogenase from Geobacillus stearothermophilus
分子名称: Alcohol dehydrogenase, ZINC ION
著者Xue, S, Feng, Y, Guo, X, Zhao, Z.
登録日2018-11-07
公開日2019-06-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Characterization of the substrate scope of an alcohol dehydrogenase commonly used as methanol dehydrogenase.
Bioorg.Med.Chem.Lett., 29, 2019
6IH8
DownloadVisualize
BU of 6ih8 by Molmil
Crystal structure of Phosphite Dehydrogenase mutant I151R/P176R/M207A from Ralstonia sp. 4506
分子名称: Phosphite dehydrogenase
著者Song, X, Feng, Y, Liu, Y, Zhao, Z.
登録日2018-09-28
公開日2019-03-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural Insights into Phosphite Dehydrogenase Variants Favoring a Non-natural Redox Cofactor
Acs Catalysis, 9, 2019
6JX1
DownloadVisualize
BU of 6jx1 by Molmil
Crystal structure of Formate dehydrogenase mutant V198I/C256I/P260S/E261P/S381N/S383F from Pseudomonas sp. 101
分子名称: Formate dehydrogenase, GLYCEROL
著者Feng, Y, Xue, S, Guo, X, Zhao, Z.
登録日2019-04-21
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.233 Å)
主引用文献Structure-Guided Design of Formate Dehydrogenase for Regeneration of a Non-Natural Redox Cofactor.
Chemistry, 26, 2020
6JUK
DownloadVisualize
BU of 6juk by Molmil
Crystal structure of Formate dehydrogenase mutant C256I/E261P/S381I from Pseudomonas sp. 101 in complex with non-natural cofactor Nicotinamide Cytosine Dinucleotide
分子名称: Formate dehydrogenase, GLYCEROL, [[(2S,3S,4R,5S)-5-(3-aminocarbonylpyridin-1-ium-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2S,3S,4R,5S)-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
著者Feng, Y, Xue, S, Guo, X, Zhao, Z.
登録日2019-04-14
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.293 Å)
主引用文献Structure-Guided Design of Formate Dehydrogenase for Regeneration of a Non-Natural Redox Cofactor.
Chemistry, 26, 2020
6JWG
DownloadVisualize
BU of 6jwg by Molmil
Crystal structure of Formate dehydrogenase mutant C256I/E261P/S381I from Pseudomonas sp. 101
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Formate dehydrogenase, GLYCEROL
著者Feng, Y, Guo, X, Xue, S, Zhao, Z.
登録日2019-04-20
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.081 Å)
主引用文献Structure-Guided Design of Formate Dehydrogenase for Regeneration of a Non-Natural Redox Cofactor.
Chemistry, 26, 2020
6IH6
DownloadVisualize
BU of 6ih6 by Molmil
Phosphite Dehydrogenase mutant I151R/P176R/M207A from Ralstonia sp. 4506 in complex with non-natural cofactor Nicotinamide Cytosine dinucleotide
分子名称: Phosphite dehydrogenase, [[(2S,3S,4R,5S)-5-(3-aminocarbonylpyridin-1-ium-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2S,3S,4R,5S)-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
著者Song, X, Feng, Y, Liu, Y, Zhao, Z.
登録日2018-09-28
公開日2019-03-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.491 Å)
主引用文献Structural Insights into Phosphite Dehydrogenase Variants Favoring a Non-natural Redox Cofactor
Acs Catalysis, 9, 2019

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon