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7ZDF
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BU of 7zdf by Molmil
IF(heme/confined) conformation of CydDC in AMP-PNP(CydD) bound state (Dataset-4)
分子名称: ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, MAGNESIUM ION, ...
著者Wu, D, Safarian, S.
登録日2022-03-29
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (2.94 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
7ZDT
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BU of 7zdt by Molmil
Occ(apo/return) conformation of CydDC mutant (E500Q.C) in ATP(CydC) bound state (Dataset-18)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, ...
著者Wu, D, Safarian, S.
登録日2022-03-29
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (2.71 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
7XBK
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BU of 7xbk by Molmil
Structure and mechanism of a mitochondrial AAA+ disaggregase CLPB
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Isoform 2 of Caseinolytic peptidase B protein homolog, MAGNESIUM ION, ...
著者Wu, D, Liu, Y, Dai, Y, Wang, G, Lu, G, Chen, Y, Li, N, Lin, J, Gao, N.
登録日2022-03-21
公開日2023-01-25
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Comprehensive structural characterization of the human AAA+ disaggregase CLPB in the apo- and substrate-bound states reveals a unique mode of action driven by oligomerization.
Plos Biol., 21, 2023
7ZDE
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BU of 7zde by Molmil
IF(apo/as isolated) conformation of CydDC in AMP-PNP(CydD) bound state (Dataset-4)
分子名称: ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, MAGNESIUM ION, ...
著者Wu, D, Safarian, S.
登録日2022-03-29
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
7ZDL
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BU of 7zdl by Molmil
IF(heme/coordinated) conformation of CydDC in AMP-PNP(CydC)/AMP-PNP(CydD) bound state (Dataset-8)
分子名称: ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, HEME B/C, ...
著者Wu, D, Safarian, S.
登録日2022-03-29
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
7ZEC
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BU of 7zec by Molmil
IF(heme/confined) conformation of CydDC in ATP(CydD) bound state (Dataset-15)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, ...
著者Wu, D, Safarian, S.
登録日2022-03-30
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
2BKQ
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BU of 2bkq by Molmil
NEDD8 protease
分子名称: SENTRIN-SPECIFIC PROTEASE 8
著者Shen, L.N, Liu, H, Dong, C, Xirodimas, D, Naismith, J.H, Hay, R.T.
登録日2005-02-18
公開日2005-02-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis of Nedd8 Ubiquitin Discrimination by the Deneddylating Enzyme Nedp1
Embo J., 24, 2005
8B30
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BU of 8b30 by Molmil
Structure of the Reconstructed Ancestor of Phenolic Acid Decarboxylase AncPAD31
分子名称: Phenolic acid decarboxylase N31
著者Mokos, D, Schruefer, A, Gruber, K, Daniel, B.
登録日2022-09-15
公開日2023-09-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Stability Increase of Phenolic Acid Decarboxylase by a Combination of Protein and Solvent Engineering Unlocks Applications at Elevated Temperatures.
Acs Sustain Chem Eng, 12, 2024
2ZPS
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BU of 2zps by Molmil
Crystal structure of anionic trypsin isoform 3 from chum salmon
分子名称: Anionic trypsin, BENZAMIDINE, CALCIUM ION
著者Iyaguchi, D, Toyota, E.
登録日2008-07-28
公開日2009-07-28
最終更新日2016-09-28
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献A structural comparison of three isoforms of anionic trypsin from chum salmon (Oncorhynchus keta).
Acta Crystallogr.,Sect.D, 65, 2009
8X2W
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BU of 8x2w by Molmil
Crystal structure of the ancestral GH19 chitinase, Anc4+LoopII (P12K/N13H/S58T/N193G/Y194F/D197R)
分子名称: the ancestral GH19 chitinase, Anc4+LoopII (P12K/N13H/S58T/N193G/Y194F/D197R)
著者Kozome, D, Laurino, P.
登録日2023-11-10
公開日2024-04-03
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Beyond the active site: The addition of a remote loop reveals a new complex biological function for chitinase enzymes
To Be Published
2C4N
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BU of 2c4n by Molmil
NagD from E.coli K-12 strain
分子名称: MAGNESIUM ION, PHOSPHATE ION, PROTEIN NAGD
著者Tremblay, L.W, Dunaway-Mariano, D, Allen, K.
登録日2005-10-20
公開日2006-01-26
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and Activity Analyses of Escherichia Coli K-12 Nagd Provide Insight Into the Evolution of Biochemical Function in the Haloalkanoic Acid Dehalogenase Superfamily
Biochemistry, 45, 2006
2C4U
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BU of 2c4u by Molmil
Crystal structure of the apo form of the 5'-Fluoro-5'-deoxyadenosine synthase enzyme from Streptomyces cattleya
分子名称: 5'-FLUORO-5'-DEOXYADENOSINE SYNTHASE, GLYCEROL
著者McEwan, A.R, Deng, H, Robinson, D.A, DeLaurentis, W, McGlinchey, R.P, O'Hagan, D, Naismith, J.H.
登録日2005-10-22
公開日2006-04-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Substrate specificity in enzymatic fluorination. The fluorinase from Streptomyces cattleya accepts 2'-deoxyadenosine substrates.
Org. Biomol. Chem., 4, 2006
2C5X
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BU of 2c5x by Molmil
Differential Binding Of Inhibitors To Active And Inactive Cdk2 Provides Insights For Drug Design
分子名称: CELL DIVISION PROTEIN KINASE 2, CYCLIN A2, HYDROXY(OXO)(3-{[(2Z)-4-[3-(1H-1,2,4-TRIAZOL-1-YLMETHYL)PHENYL]PYRIMIDIN-2(5H)-YLIDENE]AMINO}PHENYL)AMMONIUM
著者Kontopidis, G, Mcinnes, C, Pandalaneni, S.R, Mcnae, I, Gibson, D, Mezna, M, Thomas, M, Wood, G, Wang, S, Walkinshaw, M.D, Fischer, P.M.
登録日2005-11-03
公開日2006-03-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Differential Binding of Inhibitors to Active and Inactive Cdk2 Provides Insights for Drug Design.
Chem.Biol., 13, 2006
3BGA
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BU of 3bga by Molmil
Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482
分子名称: Beta-galactosidase, CHLORIDE ION, MAGNESIUM ION, ...
著者Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-11-26
公開日2007-12-11
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure analysis of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482.
To be Published
2BF0
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BU of 2bf0 by Molmil
crystal structure of the rpr of pcf11
分子名称: CALCIUM ION, PCF11
著者Noble, C.G, Hollingworth, D, Martin, S.R, Adeniran, V.E, Smerdon, S.J, Kelly, G, Taylor, I.A, Ramos, A.
登録日2004-12-02
公開日2005-01-18
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Key Features of the Interaction between Pcf11 Cid and RNA Polymerase II Ctd.
Nat.Struct.Mol.Biol., 12, 2005
2BTQ
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BU of 2btq by Molmil
Structure of BtubAB heterodimer from Prosthecobacter dejongeii
分子名称: GUANOSINE-5'-DIPHOSPHATE, SULFATE ION, TUBULIN BTUBA, ...
著者Schlieper, D, Lowe, J.
登録日2005-06-06
公開日2005-06-14
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of Bacterial Tubulin Btuba/B: Evidence for Horizontal Gene Transfer.
Proc.Natl.Acad.Sci.USA, 102, 2005
2C1N
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BU of 2c1n by Molmil
Molecular basis for the recognition of phosphorylated and phosphoacetylated histone H3 by 14-3-3
分子名称: 14-3-3 PROTEIN ZETA/DELTA, HISTONE H3 ACETYLPHOSPHOPEPTIDE
著者Welburn, J.P.I, Macdonald, N, Noble, M.E.M, Nguyen, A, Yaffe, M.B, Clynes, D, Moggs, J.G, Orphanides, G, Thomson, S, Edmunds, J.W, Clayton, A.L, Endicott, J.A, Mahadevan, L.C.
登録日2005-09-16
公開日2005-11-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Molecular Basis for the Recognition of Phosphorylated and Phosphoacetylated Histone H3 by 14-3-3.
Mol.Cell, 20, 2005
3BDU
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BU of 3bdu by Molmil
Crystal structure of protein Q6D8G1 at the resolution 1.9 A. Northeast Structural Genomics Consortium target EwR22A.
分子名称: Putative lipoprotein
著者Kuzin, A.P, Su, M, Seetharaman, J, Wang, D, Fang, Y, Cunningham, K, Owens, L, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2007-11-15
公開日2007-11-27
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of protein Q6D8G1 at the resolution 1.9 A.
To be Published
2BN8
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BU of 2bn8 by Molmil
Solution Structure and interactions of the E .coli Cell Division Activator Protein CedA
分子名称: CELL DIVISION ACTIVATOR CEDA
著者Chen, H.A, Simpson, P, Huyton, T, Roper, D, Matthews, S.
登録日2005-03-22
公開日2006-12-21
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution Structure and Interactions of the Escherichia Coli Cell Division Activator Protein Ceda.
Biochemistry, 44, 2005
8UXN
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BU of 8uxn by Molmil
Caulobacter crescentus FljM flagellar filament (symmetrized)
分子名称: Flagellin FljM
著者Sanchez, J.C, Montemayor, E.J, Ploscariu, N.T, Parrell, D, Baumgardt, J.K, Yang, J.E, Sibert, B, Cai, K, Wright, E.R.
登録日2023-11-09
公開日2024-06-26
実験手法ELECTRON MICROSCOPY (2.11 Å)
主引用文献Direct evidence for multi-flagellin filament stabilization via atomic-level architecture of Caulobacter crescentus flagellar filaments
To Be Published
8UXJ
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BU of 8uxj by Molmil
Caulobacter crescentus FljK flagellar filament (asymmetrical)
分子名称: Flagellin FljK
著者Sanchez, J.C, Montemayor, E.J, Ploscariu, N.T, Parrell, D, Baumgardt, J.K, Yang, J.E, Sibert, B, Cai, K, Wright, E.R.
登録日2023-11-09
公開日2024-06-26
実験手法ELECTRON MICROSCOPY (2.71 Å)
主引用文献Atomic-level architecture of Caulobacter crescentus flagellar filaments provide evidence for multi-flagellin filament stabilization
To Be Published
8VAC
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BU of 8vac by Molmil
Cryogenic electron microscopy structure of human serum albumin in complex with teniposide
分子名称: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-(thiophen-2-ylmethylidene)-beta-D-glucopyranoside, Serum albumin
著者Catalano, C, Lucier, K.W, To, D, Senko, S, Tran, N.L, Farwell, A.C, Silva, S.M, Dip, P.V, Poweleit, N, Scapin, G.
登録日2023-12-11
公開日2024-06-26
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献The CryoEM structure of human serum albumin in complex with ligands.
J.Struct.Biol., 216, 2024
3BHJ
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BU of 3bhj by Molmil
Crystal structure of human Carbonyl Reductase 1 in complex with glutathione
分子名称: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, 3-(4-AMINO-1-TERT-BUTYL-1H-PYRAZOLO[3,4-D]PYRIMIDIN-3-YL)PHENOL, Carbonyl reductase [NADPH] 1, ...
著者Rauh, D, Bateman, R.L, Shokat, K.M.
登録日2007-11-28
公開日2008-10-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Human carbonyl reductase 1 is an s-nitrosoglutathione reductase
J.Biol.Chem., 283, 2008
2BKR
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BU of 2bkr by Molmil
NEDD8 NEDP1 complex
分子名称: NEDDYLIN, SENTRIN-SPECIFIC PROTEASE 8
著者Shen, L.N, Liu, H, Dong, C, Xirodimas, D, Naismith, J.H, Hay, R.T.
登録日2005-02-18
公開日2005-09-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Basis of Nedd8 Ubiquitin Discrimination by the Deneddylating Enzyme Nedp1
Embo J., 24, 2005
8VAE
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BU of 8vae by Molmil
Cryogenic electron microscopy structure of human serum albumin in complex with salicylic acid
分子名称: 2-HYDROXYBENZOIC ACID, Serum albumin
著者Catalano, C, Lucier, K.W, To, D, Senko, S, Tran, N.L, Farwell, A.C, Silva, S.M, Dip, P.V, Poweleit, N, Scapin, G.
登録日2023-12-11
公開日2024-06-26
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献The CryoEM structure of human serum albumin in complex with ligands.
J.Struct.Biol., 216, 2024

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件を2024-08-14に公開中

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