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5JY7
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Complex of Mycobacterium smegmatis trehalose synthase with maltokinase
分子名称: CALCIUM ION, Maltokinase, Trehalose synthase/amylase TreS
著者Futterer, K, Kermani, A.A, Besra, G.S.
登録日2016-05-13
公開日2017-05-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Crystal structure of the TreS-Pep2 complex, initiating alpha-glucan synthesis in the GlgE pathway of mycobacteria.
J.Biol.Chem., 2019
8V9K
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BU of 8v9k by Molmil
Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Rv2629 (Balon) (Structure 5)
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S Ribosomal Protein S2, ...
著者Rybak, M.Y, Helena-Bueno, K, Hill, C.H, Melnikov, S.V, Gagnon, M.G.
登録日2023-12-08
公開日2024-02-07
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献A new family of bacterial ribosome hibernation factors.
Nature, 626, 2024
8V9L
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BU of 8v9l by Molmil
Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) and MsmegEF-Tu(GDP) (Composite structure 6)
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S Ribosomal Protein S2, ...
著者Rybak, M.Y, Helena-Bueno, K, Hill, C.H, Melnikov, S.V, Gagnon, M.G.
登録日2023-12-08
公開日2024-02-07
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献A new family of bacterial ribosome hibernation factors.
Nature, 626, 2024
8V9J
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BU of 8v9j by Molmil
Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) (Structure 4)
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S Ribosomal Protein S14, ...
著者Rybak, M.Y, Helena-Bueno, K, Hill, C.H, Melnikov, S.V, Gagnon, M.G.
登録日2023-12-08
公開日2024-02-07
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献A new family of bacterial ribosome hibernation factors.
Nature, 626, 2024
6J2A
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BU of 6j2a by Molmil
The structure of HLA-A*3003/NP44
分子名称: Beta-2-microglobulin, HLA-A*3003, NP44
著者Zhu, S.Y, Liu, K.F, Chai, Y, Ding, C.M, Lv, J.X, Gao, F.G, Lou, Y.L, Liu, W.J.
登録日2018-12-31
公開日2019-09-25
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Divergent Peptide Presentations of HLA-A*30 Alleles Revealed by Structures With Pathogen Peptides.
Front Immunol, 10, 2019
6J1W
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BU of 6j1w by Molmil
The structure of HLA-A*3001/RT313
分子名称: ALA-ILE-PHE-GLN-SER-SER-MET-THR-LYS, Beta-2-microglobulin, HLA-A*3001
著者Zhu, S.Y, Liu, K.F, Chai, Y, Ding, C.M, Lv, J.X, Gao, G.F, Lou, Y.L, Liu, W.J.
登録日2018-12-29
公開日2019-09-25
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献Divergent Peptide Presentations of HLA-A*30 Alleles Revealed by Structures With Pathogen Peptides.
Front Immunol, 10, 2019
6J29
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BU of 6j29 by Molmil
The structure of HLA-A*3003/MTB
分子名称: Beta-2-microglobulin, HLA-A*3003, MTB
著者Zhu, S.Y, Liu, K.F, Chai, Y, Ding, C.M, Lv, J.X, Gao, F.G, Lou, Y.L, Liu, W.J.
登録日2018-12-31
公開日2019-09-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Divergent Peptide Presentations of HLA-A*30 Alleles Revealed by Structures With Pathogen Peptides.
Front Immunol, 10, 2019
8U0U
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DdmD dimer in complex with ssDNA
分子名称: DNA (5'-D(P*TP*TP*AP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Helicase/UvrB N-terminal domain-containing protein
著者Bravo, J.P.K.
登録日2023-08-29
公開日2024-07-10
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Plasmid targeting and destruction by the DdmDE bacterial defence system.
Nature, 630, 2024
8U0W
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DdmD monomer in complex with ssDNA
分子名称: DNA (5'-D(P*TP*TP*AP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Helicase/UvrB N-terminal domain-containing protein
著者Bravo, J.P.K.
登録日2023-08-29
公開日2024-07-10
実験手法ELECTRON MICROSCOPY (2.99 Å)
主引用文献Plasmid targeting and destruction by the DdmDE bacterial defence system.
Nature, 630, 2024
8U3K
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DdmDE handover complex
分子名称: DNA (29-MER), DNA (5'-D(P*GP*GP*AP*AP*AP*TP*GP*TP*TP*GP*AP*AP*TP*AP*C)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), ...
著者Bravo, J.P.K.
登録日2023-09-07
公開日2024-07-10
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Plasmid targeting and destruction by the DdmDE bacterial defence system.
Nature, 630, 2024
9BQV
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BU of 9bqv by Molmil
DdmD dimer apoprotein
分子名称: Helicase/UvrB N-terminal domain-containing protein
著者Bravo, J.P.K, Taylor, D.W.
登録日2024-05-10
公開日2024-07-03
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Plasmid targeting and destruction by the DdmDE bacterial defence system.
Nature, 630, 2024
8VTT
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BU of 8vtt by Molmil
Meis1 homeobox domain bound to neomycin fragment
分子名称: Homeobox protein Meis1, RIBOSTAMYCIN, SULFATE ION
著者Tomchick, D.R, Ahmed, M.S, Nguyen, N.U.N, Sadek, H.A.
登録日2024-01-27
公開日2024-02-14
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Identification of FDA-Approved Drugs That Induce Heart Regeneration in Mammals
to be published
8VTS
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BU of 8vts by Molmil
Meis1 homeobox domain bound to paromomycin fragment
分子名称: 1,2-ETHANEDIOL, Homeobox protein Meis1, ISOPROPYL ALCOHOL, ...
著者Tomchick, D.R, Ahmed, M.S, Nguyen, N.U.N.
登録日2024-01-27
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Identification of FDA-Approved Drugs That Induce Heart Regeneration in Mammals
to be published
8U0J
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BU of 8u0j by Molmil
DdmE in complex with guide and target DNA
分子名称: DNA (5'-D(P*AP*CP*TP*TP*AP*AP*AP*GP*TP*CP*TP*AP*AP*CP*CP*TP*AP*TP*AP*GP*GP*AP*T)-3'), DNA (5'-D(P*AP*TP*CP*CP*TP*AP*TP*AP*GP*GP*A)-3'), DNA (5'-D(P*GP*TP*TP*AP*GP*AP*CP*TP*TP*TP*AP*AP*GP*T)-3'), ...
著者Bravo, J.P.K.
登録日2023-08-29
公開日2024-07-03
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Plasmid targeting and destruction by the DdmDE bacterial defence system.
Nature, 630, 2024
2I4T
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BU of 2i4t by Molmil
Crystal structure of Purine Nucleoside Phosphorylase from Trichomonas vaginalis with Imm-A
分子名称: 3,4-PYRROLIDINEDIOL,2-(4-AMINO-5H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)-2S,3S,4R,5R, PHOSPHATE ION, Trichomonas vaginalis purine nucleoside phosphorylase
著者Rinaldo-Matthis, A, Schramm, V.L, Almo, S.C.
登録日2006-08-22
公開日2007-06-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.74 Å)
主引用文献Inhibition and structure of Trichomonas vaginalis purine nucleoside phosphorylase with picomolar transition state analogues.
Biochemistry, 46, 2007
6JBX
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BU of 6jbx by Molmil
Crystal structure of Streptococcus pneumoniae FabT in complex with DNA
分子名称: DNA (5'-D(*AP*AP*TP*AP*GP*TP*TP*TP*GP*AP*CP*TP*GP*TP*CP*AP*AP*AP*TP*TP*AP*TP*G)-3'), DNA (5'-D(*CP*AP*TP*AP*AP*TP*TP*TP*GP*AP*CP*AP*GP*TP*CP*AP*AP*AP*CP*TP*AP*TP*T)-3'), Fatty acid biosynthesis transcriptional regulator, ...
著者Zuo, G, Chen, Z.P, Li, Q, Zhou, C.Z.
登録日2019-01-27
公開日2019-07-24
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural insights into repression of the Pneumococcal fatty acid synthesis pathway by repressor FabT and co-repressor acyl-ACP.
Febs Lett., 593, 2019
4QXS
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BU of 4qxs by Molmil
Crystal structure of human FPPS in complex with WC01088
分子名称: (2-{2-[(2S)-3-methylbutan-2-yl]-5-phenyl-1H-indol-3-yl}ethane-1,1-diyl)bis(phosphonic acid), Farnesyl pyrophosphate synthase, GLYCEROL, ...
著者Park, J, Zielinski, M, Weiling, C, Tsantrizos, Y.S, Berghuis, A.M.
登録日2014-07-21
公開日2015-02-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Probing the molecular and structural elements of ligands binding to the active site versus an allosteric pocket of the human farnesyl pyrophosphate synthase.
Bioorg.Med.Chem.Lett., 25, 2015
5K3E
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BU of 5k3e by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - Asp110Asn/Glycolate - Cocrystallized
分子名称: CHLORIDE ION, Fluoroacetate dehalogenase, GLYCOLIC ACID
著者Mehrabi, P, Kim, T.H, Prosser, S.R, Pai, E.F.
登録日2016-05-19
公開日2017-02-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献The role of dimer asymmetry and protomer dynamics in enzyme catalysis.
Science, 355, 2017
5K3A
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BU of 5k3a by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - His280Asn/Fluoroacetate - Cocrystallized - Both Protomers Reacted with Ligand
分子名称: CHLORIDE ION, Fluoroacetate dehalogenase
著者Mehrabi, P, Kim, T.H, Prosser, S.R, Pai, E.F.
登録日2016-05-19
公開日2017-02-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.511 Å)
主引用文献The role of dimer asymmetry and protomer dynamics in enzyme catalysis.
Science, 355, 2017
5K3B
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BU of 5k3b by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - Asp110Asn/Chloroacetate - Cocrystallized
分子名称: CHLORIDE ION, Fluoroacetate dehalogenase, chloroacetic acid
著者Mehrabi, P, Kim, T.H, Prosser, S.R, Pai, E.F.
登録日2016-05-19
公開日2017-02-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献The role of dimer asymmetry and protomer dynamics in enzyme catalysis.
Science, 355, 2017
5K3C
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BU of 5k3c by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - WT/5-Fluorotryptophan
分子名称: CHLORIDE ION, Fluoroacetate dehalogenase
著者Mehrabi, P, Kim, T.H, Prosser, S.R, Pai, E.F.
登録日2016-05-19
公開日2017-02-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.541 Å)
主引用文献The role of dimer asymmetry and protomer dynamics in enzyme catalysis.
Science, 355, 2017
5VB2
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BU of 5vb2 by Molmil
Crystal structure of the NavAb voltage-gated sodium channel in a closed conformation
分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, CHLORIDE ION, ...
著者Lenaeus, M.J, Catterall, W.A.
登録日2017-03-28
公開日2017-04-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structures of closed and open states of a voltage-gated sodium channel.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4US2
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BU of 4us2 by Molmil
The crystal structure of H-Ras and SOS in complex with ligands
分子名称: 3-[(3R)-1-ethyl-2,5-dioxopyrrolidin-3-yl]benzamide, GTPASE HRAS, SON OF SEVENLESS HOMOLOG 1
著者Winter, J.J.G, Anderson, M, Blades, K, Brassington, C, Breeze, A.L, Chresta, C, Embrey, K, Fairley, G, Faulder, P, Finlay, M.R.V, Kettle, J.G, Nowak, T, Overman, R, Patel, S.J, Perkins, P, Spadola, L, Tart, J, Tucker, J, Wrigley, G.
登録日2014-07-02
公開日2015-03-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Small Molecule Binding Sites on the Ras:SOS Complex Can be Exploited for Inhibition of Ras Activation.
J.Med.Chem., 58, 2015
6QKU
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BU of 6qku by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - Tyr219Phe - Chloroacetate soaked 2hr
分子名称: CHLORIDE ION, Fluoroacetate dehalogenase, GLYCOLIC ACID, ...
著者Mehrabi, P, Kim, T.H, Prosser, R.S, Pai, E.F.
登録日2019-01-30
公開日2019-06-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.511 Å)
主引用文献Substrate-Based Allosteric Regulation of a Homodimeric Enzyme.
J.Am.Chem.Soc., 141, 2019
6QKW
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BU of 6qkw by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - Tyr219Phe - Fluoroacetate soaked 2hr
分子名称: CHLORIDE ION, Fluoroacetate dehalogenase, GLYCOLIC ACID, ...
著者Mehrabi, P, Kim, T.H, Prosser, R.S, Pai, E.F.
登録日2019-01-30
公開日2019-06-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.512 Å)
主引用文献Substrate-Based Allosteric Regulation of a Homodimeric Enzyme.
J.Am.Chem.Soc., 141, 2019

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