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6VWH
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BU of 6vwh by Molmil
Leg region of the open conformation of the human type 1 insulin-like growth factor receptor ectodomain in complex with human insulin-like growth factor II.
分子名称: Leucine-zippered human type 1 insulin-like growth factor receptor ectodomain
著者Xu, Y, Kirk, N.S, Lawrence, M.C, Croll, T.I.
登録日2020-02-19
公開日2020-05-13
最終更新日2020-07-22
実験手法ELECTRON MICROSCOPY (4.26 Å)
主引用文献How IGF-II Binds to the Human Type 1 Insulin-like Growth Factor Receptor.
Structure, 28, 2020
6VWG
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BU of 6vwg by Molmil
Head region of the open conformation of the human type 1 insulin-like growth factor receptor ectodomain in complex with human insulin-like growth factor II.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Insulin-like growth factor II, Leucine-zippered human type 1 insulin-like growth factor receptor ectodomain
著者Xu, Y, Kirk, N.S, Lawrence, M.C, Croll, T.I.
登録日2020-02-19
公開日2020-05-13
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献How IGF-II Binds to the Human Type 1 Insulin-like Growth Factor Receptor.
Structure, 28, 2020
6VWJ
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BU of 6vwj by Molmil
Leg region of the closed conformation of the human type 1 insulin-like growth factor receptor ectodomain in complex with human insulin-like growth factor II
分子名称: Leucine-zippered human type 1 insulin-like growth factor receptor ectodomain
著者Xu, Y, Kirk, N.S, Lawrence, M.C, Croll, T.I.
登録日2020-02-19
公開日2020-05-13
最終更新日2020-07-22
実験手法ELECTRON MICROSCOPY (4.21 Å)
主引用文献How IGF-II Binds to the Human Type 1 Insulin-like Growth Factor Receptor.
Structure, 28, 2020
2EEP
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BU of 2eep by Molmil
Prolyl Tripeptidyl Aminopeptidase Complexed with an Inhibitor
分子名称: Dipeptidyl aminopeptidase IV, putative, SULFATE ION, ...
著者Xu, Y, Nakajima, Y, Ito, K, Yoshimoto, T.
登録日2007-02-16
公開日2008-02-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Novel inhibitor for prolyl tripeptidyl aminopeptidase from Porphyromonas gingivalis and details of substrate-recognition mechanism
J.Mol.Biol., 375, 2008
1NH5
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BU of 1nh5 by Molmil
AUTOMATIC ASSIGNMENT OF NMR DATA AND DETERMINATION OF THE PROTEIN STRUCTURE OF A NEW WORLD SCORPION NEUROTOXIN USING NOAH/DIAMOD
分子名称: Neurotoxin 5
著者Xu, Y, Jablonsky, M.J, Jackson, P.L, Krishna, N.R, Braun, W.
登録日2002-12-18
公開日2003-01-07
最終更新日2018-01-24
実験手法SOLUTION NMR
主引用文献Automatic assignment of NOESY Cross peaks and determination of the protein structure of a new world scorpion neurotoxin Using NOAH/DIAMOD
J.Magn.Reson., 148, 2001
3BOC
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BU of 3boc by Molmil
Carbonic anhydrase from marine diatom Thalassiosira weissflogii- zinc bound domain 2 (CDCA1-R2)
分子名称: Cadmium-specific carbonic anhydrase, ZINC ION
著者Xu, Y, Feng, L, Jeffrey, P.D, Shi, Y, Morel, F.M.M.
登録日2007-12-17
公開日2008-01-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and metal exchange in the cadmium carbonic anhydrase of marine diatoms.
Nature, 452, 2008
3BOB
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BU of 3bob by Molmil
Carbonic anhydrase from marine diatom Thalassiosira weissflogii- cadmium bound domain 2
分子名称: CADMIUM ION, Cadmium-specific carbonic anhydrase
著者Xu, Y, Feng, L, Jeffrey, P.D, Shi, Y, Morel, F.M.M.
登録日2007-12-17
公開日2008-01-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure and metal exchange in the cadmium carbonic anhydrase of marine diatoms.
Nature, 452, 2008
3BOE
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BU of 3boe by Molmil
Carbonic anhydrase from marine diatom Thalassiosira weissflogii- cadmium bound domain 2 with acetate (CDCA1-R2)
分子名称: ACETATE ION, CADMIUM ION, Cadmium-specific carbonic anhydrase
著者Xu, Y, Feng, L, Jeffrey, P.D, Shi, Y, Morel, F.M.M.
登録日2007-12-17
公開日2008-01-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure and metal exchange in the cadmium carbonic anhydrase of marine diatoms.
Nature, 452, 2008
3BOJ
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BU of 3boj by Molmil
Carbonic anhydrase from marine diatom Thalassiosira weissflogii- cadmium bound domain 1 without bound metal (CDCA1-R1)
分子名称: ACETATE ION, Cadmium-specific carbonic anhydrase
著者Xu, Y, Feng, L, Jeffrey, P.D, Shi, Y, Morel, F.M.M.
登録日2007-12-17
公開日2008-01-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure and metal exchange in the cadmium carbonic anhydrase of marine diatoms.
Nature, 452, 2008
3BOH
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BU of 3boh by Molmil
Carbonic anhydrase from marine diatom Thalassiosira weissflogii- cadmium bound domain 1 with acetate (CDCA1-R1)
分子名称: ACETATE ION, CADMIUM ION, Cadmium-specific carbonic anhydrase
著者Xu, Y, Feng, L, Jeffrey, P.D, Shi, Y, Morel, F.M.M.
登録日2007-12-17
公開日2008-01-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and metal exchange in the cadmium carbonic anhydrase of marine diatoms.
Nature, 452, 2008
4DK1
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BU of 4dk1 by Molmil
Crystal Structure of MacA-MexA chimeric protein, containing the Pseudomonas aeruginosa MexA alpha-hairpin domain.
分子名称: Putative MacA, Multidrug resistance protein mexA
著者Xu, Y, Ha, N.C.
登録日2012-02-03
公開日2012-03-07
最終更新日2017-08-23
実験手法X-RAY DIFFRACTION (3.499 Å)
主引用文献Assembly and channel opening of outer membrane protein in tripartite drug efflux pumps of Gram-negative bacteria.
J.Biol.Chem., 287, 2012
4DK0
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BU of 4dk0 by Molmil
Crystal structure of MacA from Actinobacillus actinomycetemcomitans
分子名称: Putative MacA
著者Xu, Y, Piao, S, Ha, N.C.
登録日2012-02-03
公開日2012-03-07
最終更新日2015-12-09
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Assembly and channel opening of outer membrane protein in tripartite drug efflux pumps of Gram-negative bacteria.
J.Biol.Chem., 287, 2012
1QR6
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BU of 1qr6 by Molmil
HUMAN MITOCHONDRIAL NAD(P)-DEPENDENT MALIC ENZYME
分子名称: MALIC ENZYME 2, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Xu, Y, Bhargava, G, Wu, H, Loeber, G, Tong, L.
登録日1999-06-18
公開日1999-07-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of human mitochondrial NAD(P)(+)-dependent malic enzyme: a new class of oxidative decarboxylases.
Structure, 7, 1999
1QY7
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BU of 1qy7 by Molmil
The structure of the PII protein from the cyanobacteria Synechococcus sp. PCC 7942
分子名称: NICKEL (II) ION, Nitrogen regulatory protein P-II, SULFATE ION
著者Xu, Y, Carr, P.D, Clancy, P, Garcia-Dominguez, M, Forchhammer, K, Florencio, F, Tandeau de Marsac, N, Vasudevan, S.G, Ollis, D.L.
登録日2003-09-09
公開日2003-09-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The structures of the PII proteins from the cyanobacteria Synechococcus sp. PCC 7942 and Synechocystis sp. PCC 6803.
Acta Crystallogr.,Sect.D, 59, 2003
1U9I
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BU of 1u9i by Molmil
Crystal Structure of Circadian Clock Protein KaiC with Phosphorylation Sites
分子名称: ADENOSINE-5'-TRIPHOSPHATE, KaiC, MAGNESIUM ION
著者Xu, Y, Mori, T, Pattanayek, R, Pattanayek, S, Egli, M, Johnson, C.H.
登録日2004-08-09
公開日2005-04-19
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Identification of key phosphorylation sites in the circadian clock protein KaiC by crystallographic and mutagenetic analyses
PROC.NATL.ACAD.SCI.USA, 101, 2004
2H25
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BU of 2h25 by Molmil
Solution Structure of Maltose Binding Protein complexed with beta-cyclodextrin
分子名称: Maltose-binding periplasmic protein
著者Xu, Y, Lin, Z, Zheng, Y, Yang, D.
登録日2006-05-18
公開日2006-10-31
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献A new strategy for structure determination of large proteins in solution without deuteration
Nat.Methods, 3, 2006
5B7N
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BU of 5b7n by Molmil
Crystal structure of periplasmic 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Aeromonas hydrophila
分子名称: GLYCEROL, MTA/SAH nucleosidase, S-ADENOSYL-L-HOMOCYSTEINE
著者Xu, Y.
登録日2016-06-08
公開日2016-12-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.399 Å)
主引用文献Structural and Functional Analyses of Periplasmic 5'-Methylthioadenosine/S-Adenosylhomocysteine Nucleosidase from Aeromonas hydrophila.
Biochemistry, 56, 2017
5B7P
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BU of 5b7p by Molmil
Structures and functional analysis of periplasmic 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Aeromonas hydrophila
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, MTA/SAH nucleosidase
著者Xu, Y.
登録日2016-06-08
公開日2016-12-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Structural and Functional Analyses of Periplasmic 5'-Methylthioadenosine/S-Adenosylhomocysteine Nucleosidase from Aeromonas hydrophila.
Biochemistry, 56, 2017
5B7G
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BU of 5b7g by Molmil
Structures and functional analysis of periplasmic 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Aeromonas hydrophila
分子名称: ADENINE, GLYCEROL, MTA/SAH nucleosidase
著者Xu, Y.
登録日2016-06-07
公開日2017-01-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.399 Å)
主引用文献Structural and Functional Analyses of Periplasmic 5'-Methylthioadenosine/S-Adenosylhomocysteine Nucleosidase from Aeromonas hydrophila.
Biochemistry, 56, 2017
5B7Q
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BU of 5b7q by Molmil
Structures and functional analysis of periplasmic 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Aeromonas hydrophila
分子名称: 5'-DEOXYADENOSINE, MTA/SAH nucleosidase
著者Xu, Y.
登録日2016-06-08
公開日2016-12-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.493 Å)
主引用文献Structural and Functional Analyses of Periplasmic 5'-Methylthioadenosine/S-Adenosylhomocysteine Nucleosidase from Aeromonas hydrophila.
Biochemistry, 56, 2017
5CB0
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BU of 5cb0 by Molmil
Crystal structure and functional implications of the tandem-type universal stress protein UspE from Escherichia coli
分子名称: 3-oxotetradecanoic acid, Universal stress protein E
著者Xu, Y, Quan, C.S, Jin, X, Jin, L, Kim, J.S, Guo, J, Fan, S, Ha, N.C.
登録日2015-06-30
公開日2016-02-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.207 Å)
主引用文献Crystal structure and functional implications of the tandem-type universal stress protein UspE from Escherichia coli.
Bmc Struct.Biol., 16, 2016
1WDF
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BU of 1wdf by Molmil
crystal structure of MHV spike protein fusion core
分子名称: E2 glycoprotein
著者Xu, Y, Liu, Y, Lou, Z, Qin, L, Li, X, Bai, Z, Tien, P, Gao, G.F, Rao, Z.
登録日2004-05-14
公開日2004-06-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis for Coronavirus-mediated Membrane Fusion: CRYSTAL STRUCTURE OF MOUSE HEPATITIS VIRUS SPIKE PROTEIN FUSION CORE
J.Biol.Chem., 279, 2004
1WDG
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BU of 1wdg by Molmil
crystal structure of MHV spike protein fusion core
分子名称: E2 glycoprotein
著者Xu, Y, Liu, Y, Lou, Z, Qin, L, Li, X, Bai, Z, Tien, P, Gao, G.F, Rao, Z.
登録日2004-05-14
公開日2004-06-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Structural Basis for Coronavirus-mediated Membrane Fusion: CRYSTAL STRUCTURE OF MOUSE HEPATITIS VIRUS SPIKE PROTEIN FUSION CORE
J.Biol.Chem., 279, 2004
1WP7
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BU of 1wp7 by Molmil
crystal structure of Nipah Virus fusion core
分子名称: fusion protein
著者Xu, Y, Liu, Y, Lou, Z, Su, N, Bai, Z, Gao, G.F, Rao, Z.
登録日2004-08-31
公開日2005-11-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of Nipah Virus fusion core
To be Published
8HDZ
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BU of 8hdz by Molmil
Monkeypox virus DNA replication holoenzyme F8, A22 and E4 complex in an apo form
分子名称: A22 DNA replication processivity factor, E4 uracil-DNA glycosylase, F8 DNA polymerase
著者Xu, Y, Wu, Y, Zhang, Y, Fan, R, Yang, Y, Li, D, Yang, B, Zhang, Z, Dong, C.
登録日2022-11-07
公開日2023-11-15
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Cryo-EM structures of human monkeypox viral replication complexes with and without DNA duplex.
Cell Res., 33, 2023

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