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2NPP
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BU of 2npp by Molmil
Structure of the Protein Phosphatase 2A Holoenzyme
分子名称: MANGANESE (II) ION, Protein Phosphatase 2, regulatory subunit A (PR 65), ...
著者Xu, Y, Chen, Y, Xing, Y, Chao, Y, Shi, Y.
登録日2006-10-28
公開日2006-12-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure of the protein phosphatase 2A holoenzyme
Cell(Cambridge,Mass.), 127, 2006
2Z3W
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BU of 2z3w by Molmil
Prolyl tripeptidyl aminopeptidase mutant E636A
分子名称: Dipeptidyl aminopeptidase IV, GLYCEROL, SULFATE ION
著者Xu, Y, Nakajima, Y, Ito, K, Yoshimoto, T.
登録日2007-06-07
公開日2008-02-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Novel inhibitor for prolyl tripeptidyl aminopeptidase from Porphyromonas gingivalis and details of substrate-recognition mechanism
J.Mol.Biol., 375, 2008
2Z3Z
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BU of 2z3z by Molmil
Prolyl tripeptidyl aminopeptidase mutant E636A complexd with an inhibitor
分子名称: Dipeptidyl aminopeptidase IV, SULFATE ION, [(2R)-1-(L-ALANYL-L-ISOLEUCYL)PYRROLIDIN-2-YL]BORONIC ACID
著者Xu, Y, Nakajima, Y, Ito, K, Yoshimoto, T.
登録日2007-06-09
公開日2008-02-19
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Novel inhibitor for prolyl tripeptidyl aminopeptidase from Porphyromonas gingivalis and details of substrate-recognition mechanism
J.Mol.Biol., 375, 2008
1FYV
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BU of 1fyv by Molmil
CRYSTAL STRUCTURE OF THE TIR DOMAIN OF HUMAN TLR1
分子名称: TOLL-LIKE RECEPTOR 1
著者Xu, Y, Tao, X, Shen, B, Horng, T, Medzhitov, R, Manley, J.L, Tong, L.
登録日2000-10-03
公開日2000-11-22
最終更新日2018-01-31
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for signal transduction by the Toll/interleukin-1 receptor domains.
Nature, 408, 2000
1FYX
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BU of 1fyx by Molmil
CRYSTAL STRUCTURE OF P681H MUTANT OF TIR DOMAIN OF HUMAN TLR2
分子名称: TOLL-LIKE RECEPTOR 2
著者Xu, Y, Tao, X, Shen, B, Horng, T, Medzhitov, R, Manley, J.L, Tong, L.
登録日2000-10-03
公開日2000-11-22
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis for signal transduction by the Toll/interleukin-1 receptor domains.
Nature, 408, 2000
1FYW
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BU of 1fyw by Molmil
CRYSTAL STRUCTURE OF THE TIR DOMAIN OF HUMAN TLR2
分子名称: TOLL-LIKE RECEPTOR 2
著者Xu, Y, Tao, X, Shen, B, Horng, T, Medzhitov, R, Manley, J.L, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2000-10-03
公開日2000-11-22
最終更新日2018-01-31
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for signal transduction by the Toll/interleukin-1 receptor domains.
Nature, 408, 2000
1GNK
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BU of 1gnk by Molmil
GLNK, A SIGNAL PROTEIN FROM E. COLI
分子名称: PROTEIN (GLNK), SULFATE ION
著者Xu, Y, Cheah, E, Carr, P.D, Vanheeswijk, W.C, Westerhoff, H.V, Vasudevan, S.G, Ollis, D.L.
登録日1998-07-14
公開日1999-07-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献GlnK, a PII-homologue: structure reveals ATP binding site and indicates how the T-loops may be involved in molecular recognition.
J.Mol.Biol., 282, 1998
3BOJ
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BU of 3boj by Molmil
Carbonic anhydrase from marine diatom Thalassiosira weissflogii- cadmium bound domain 1 without bound metal (CDCA1-R1)
分子名称: ACETATE ION, Cadmium-specific carbonic anhydrase
著者Xu, Y, Feng, L, Jeffrey, P.D, Shi, Y, Morel, F.M.M.
登録日2007-12-17
公開日2008-01-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure and metal exchange in the cadmium carbonic anhydrase of marine diatoms.
Nature, 452, 2008
3BOH
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BU of 3boh by Molmil
Carbonic anhydrase from marine diatom Thalassiosira weissflogii- cadmium bound domain 1 with acetate (CDCA1-R1)
分子名称: ACETATE ION, CADMIUM ION, Cadmium-specific carbonic anhydrase
著者Xu, Y, Feng, L, Jeffrey, P.D, Shi, Y, Morel, F.M.M.
登録日2007-12-17
公開日2008-01-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and metal exchange in the cadmium carbonic anhydrase of marine diatoms.
Nature, 452, 2008
6VWI
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BU of 6vwi by Molmil
Head region of the closed conformation of the human type 1 insulin-like growth factor receptor ectodomain in complex with human insulin-like growth factor II.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Insulin-like growth factor II, Leucine-zippered human type 1 insulin-like growth factor receptor ectodomain
著者Xu, Y, Kirk, N.S, Lawrence, M.C, Croll, T.I.
登録日2020-02-19
公開日2020-05-13
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献How IGF-II Binds to the Human Type 1 Insulin-like Growth Factor Receptor.
Structure, 28, 2020
6VWH
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BU of 6vwh by Molmil
Leg region of the open conformation of the human type 1 insulin-like growth factor receptor ectodomain in complex with human insulin-like growth factor II.
分子名称: Leucine-zippered human type 1 insulin-like growth factor receptor ectodomain
著者Xu, Y, Kirk, N.S, Lawrence, M.C, Croll, T.I.
登録日2020-02-19
公開日2020-05-13
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (4.26 Å)
主引用文献How IGF-II Binds to the Human Type 1 Insulin-like Growth Factor Receptor.
Structure, 28, 2020
6VWG
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BU of 6vwg by Molmil
Head region of the open conformation of the human type 1 insulin-like growth factor receptor ectodomain in complex with human insulin-like growth factor II.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Insulin-like growth factor II, Leucine-zippered human type 1 insulin-like growth factor receptor ectodomain
著者Xu, Y, Kirk, N.S, Lawrence, M.C, Croll, T.I.
登録日2020-02-19
公開日2020-05-13
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献How IGF-II Binds to the Human Type 1 Insulin-like Growth Factor Receptor.
Structure, 28, 2020
4U7M
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BU of 4u7m by Molmil
LRIG1 extracellular domain: Structure and Function Analysis
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Leucine-rich repeats and immunoglobulin-like domains protein 1
著者Xu, Y.
登録日2014-07-31
公開日2015-04-08
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.757 Å)
主引用文献LRIG1 Extracellular Domain: Structure and Function Analysis.
J.Mol.Biol., 427, 2015
6VWJ
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BU of 6vwj by Molmil
Leg region of the closed conformation of the human type 1 insulin-like growth factor receptor ectodomain in complex with human insulin-like growth factor II
分子名称: Leucine-zippered human type 1 insulin-like growth factor receptor ectodomain
著者Xu, Y, Kirk, N.S, Lawrence, M.C, Croll, T.I.
登録日2020-02-19
公開日2020-05-13
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (4.21 Å)
主引用文献How IGF-II Binds to the Human Type 1 Insulin-like Growth Factor Receptor.
Structure, 28, 2020
4U7L
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BU of 4u7l by Molmil
LRIG1 extracellular domain: Structure and Function Analysis
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
著者Xu, Y.
登録日2014-07-31
公開日2015-04-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献LRIG1 Extracellular Domain: Structure and Function Analysis.
J.Mol.Biol., 427, 2015
2H25
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BU of 2h25 by Molmil
Solution Structure of Maltose Binding Protein complexed with beta-cyclodextrin
分子名称: Maltose-binding periplasmic protein
著者Xu, Y, Lin, Z, Zheng, Y, Yang, D.
登録日2006-05-18
公開日2006-10-31
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献A new strategy for structure determination of large proteins in solution without deuteration
Nat.Methods, 3, 2006
5CB0
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BU of 5cb0 by Molmil
Crystal structure and functional implications of the tandem-type universal stress protein UspE from Escherichia coli
分子名称: 3-oxotetradecanoic acid, Universal stress protein E
著者Xu, Y, Quan, C.S, Jin, X, Jin, L, Kim, J.S, Guo, J, Fan, S, Ha, N.C.
登録日2015-06-30
公開日2016-02-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.207 Å)
主引用文献Crystal structure and functional implications of the tandem-type universal stress protein UspE from Escherichia coli.
Bmc Struct.Biol., 16, 2016
5DNW
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BU of 5dnw by Molmil
Crystal structure of KAI2-like protein from Striga (apo state 1)
分子名称: 1,2-ETHANEDIOL, FORMIC ACID, SODIUM ION, ...
著者Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M.
登録日2015-09-10
公開日2016-08-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Structural basis of unique ligand specificity of KAI2-like protein from parasitic weed Striga hermonthica
Sci Rep, 6, 2016
5DNU
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BU of 5dnu by Molmil
Crystal structure of Striga KAI2-like protein in complex with karrikin
分子名称: 1,2-ETHANEDIOL, 3-methyl-2H-furo[2,3-c]pyran-2-one, BENZOIC ACID, ...
著者Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M.
登録日2015-09-10
公開日2016-08-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structural basis of unique ligand specificity of KAI2-like protein from parasitic weed Striga hermonthica
Sci Rep, 6, 2016
5DNV
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BU of 5dnv by Molmil
Crystal structure of KAI2-like protein from Striga (apo state 2)
分子名称: BENZOIC ACID, FORMIC ACID, ShKAI2iB
著者Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M.
登録日2015-09-10
公開日2016-08-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural basis of unique ligand specificity of KAI2-like protein from parasitic weed Striga hermonthica
Sci Rep, 6, 2016
1WDF
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BU of 1wdf by Molmil
crystal structure of MHV spike protein fusion core
分子名称: E2 glycoprotein
著者Xu, Y, Liu, Y, Lou, Z, Qin, L, Li, X, Bai, Z, Tien, P, Gao, G.F, Rao, Z.
登録日2004-05-14
公開日2004-06-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis for Coronavirus-mediated Membrane Fusion: CRYSTAL STRUCTURE OF MOUSE HEPATITIS VIRUS SPIKE PROTEIN FUSION CORE
J.Biol.Chem., 279, 2004
1WDG
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BU of 1wdg by Molmil
crystal structure of MHV spike protein fusion core
分子名称: E2 glycoprotein
著者Xu, Y, Liu, Y, Lou, Z, Qin, L, Li, X, Bai, Z, Tien, P, Gao, G.F, Rao, Z.
登録日2004-05-14
公開日2004-06-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Structural Basis for Coronavirus-mediated Membrane Fusion: CRYSTAL STRUCTURE OF MOUSE HEPATITIS VIRUS SPIKE PROTEIN FUSION CORE
J.Biol.Chem., 279, 2004
4J0E
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BU of 4j0e by Molmil
Crystal structure of 3-hydroxyacyl-CoA dehydrogenase from Caenorhadbitis elegans in P1 space group
分子名称: Probable 3-hydroxyacyl-CoA dehydrogenase F54C8.1
著者Xu, Y, Sun, F, Zhai, Y.
登録日2013-01-30
公開日2014-03-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Purification, crystallization and preliminary crystallographic analysis of 3-hydroxyacyl-CoA dehydrogenase from Caenorhabditis elegans.
Acta Crystallogr.,Sect.F, 69, 2013
4J0F
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BU of 4j0f by Molmil
Crystal structure of 3-hydroxyacyl-CoA dehydrogenase from Caenorhadbitis elegans in P212121 space group
分子名称: Probable 3-hydroxyacyl-CoA dehydrogenase F54C8.1
著者Xu, Y, Sun, F, Zhai, Y.
登録日2013-01-30
公開日2014-03-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Purification, crystallization and preliminary crystallographic analysis of 3-hydroxyacyl-CoA dehydrogenase from Caenorhabditis elegans.
Acta Crystallogr.,Sect.F, 69, 2013
1WP7
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BU of 1wp7 by Molmil
crystal structure of Nipah Virus fusion core
分子名称: fusion protein
著者Xu, Y, Liu, Y, Lou, Z, Su, N, Bai, Z, Gao, G.F, Rao, Z.
登録日2004-08-31
公開日2005-11-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of Nipah Virus fusion core
To be Published

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