Search by PDB author

SAM-bound SAM-IV riboswitch
分子名称:	RNA (119-MER), S-ADENOSYLMETHIONINE
著者	Zhang, K, Li, S, Kappel, K, Pintilie, G, Su, Z, Mou, T, Schmid, M, Das, R, Chiu, W.
登録日	2019-09-23
公開日	2019-12-18
最終更新日	2024-03-20
実験手法	ELECTRON MICROSCOPY (4.1 Å)
主引用文献	Cryo-EM structure of a 40 kDa SAM-IV riboswitch RNA at 3.7 angstrom resolution. Nat Commun, 10, 2019

6VQW

Type I-F CRISPR-Csy complex with its inhibitor AcrF8
分子名称:	AcrF8, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ...
著者	Zhang, K, Li, S, Pintilie, G, Zhu, Y, Huang, Z, Chiu, W.
登録日	2020-02-06
公開日	2020-03-11
最終更新日	2024-03-06
実験手法	ELECTRON MICROSCOPY (3.42 Å)
主引用文献	Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR-Cas complex revealed by cryo-EM. Proc.Natl.Acad.Sci.USA, 117, 2020

4BCL

FMO protein from Prosthecochloris aestuarii 2K at Room Temperature
分子名称:	BACTERIOCHLOROPHYLL A, BACTERIOCHLOROPHYLL A PROTEIN
著者	Tronrud, D.E, Matthews, B.W.
登録日	1998-04-17
公開日	1998-09-16
最終更新日	2024-02-28
実験手法	X-RAY DIFFRACTION (1.9 Å)
主引用文献	Refinement of the Structure of a Water-Soluble Antenna Complex from Green Photosynthetic Bacteria by Incorporation of the Chemically Determined Amino Acid Sequence Photosynthetic Reaction Center, 1, 1993

7RRP

Apoferritin structure at 1.27 angstrom resolution determined from a 300 kV Titan Krios G3i electron microscope with Falcon4 detector
分子名称:	Ferritin heavy chain, SODIUM ION, ZINC ION
著者	Pintilie, G, Zhang, K, Chiu, W.
登録日	2021-08-10
公開日	2021-08-18
最終更新日	2024-06-05
実験手法	ELECTRON MICROSCOPY (1.27 Å)
主引用文献	Resolving individual atoms of protein complex by cryo-electron microscopy. Cell Res., 30, 2020

7TNT

The tubulin-based conoid from detergent-extract Toxoplasma gondii cells
分子名称:	Tubulin alpha chain, Tubulin beta chain
著者	Sun, S.Y, Pintilie, G.D, Chen, M, Chiu, W.
登録日	2022-01-21
公開日	2022-06-22
実験手法	ELECTRON MICROSCOPY (9.3 Å)
主引用文献	Cryo-ET of Toxoplasma parasites gives subnanometer insight into tubulin-based structures. Proc.Natl.Acad.Sci.USA, 119, 2022

7TNS

Subpellicular microtubule from detergent-extract Toxoplasma gondii cells
分子名称:	Microtubule associated protein SPM1, PDI family protein, Tubulin alpha chain, ...
著者	Sun, S.Y, Pintilie, G.D, Chen, M, Chiu, W.
登録日	2022-01-21
公開日	2022-06-22
実験手法	ELECTRON MICROSCOPY (6.7 Å)
主引用文献	Cryo-ET of Toxoplasma parasites gives subnanometer insight into tubulin-based structures. Proc.Natl.Acad.Sci.USA, 119, 2022

7TNQ

The symmetry-released subpellicular microtubule map from detergent-extracted Toxoplasma cells
分子名称:	Microtubule associated protein SPM1, PDI family protein, Tubulin alpha chain, ...
著者	Sun, S.Y, Pintilie, G.D, Chen, M.
登録日	2022-01-21
公開日	2022-06-22
実験手法	ELECTRON MICROSCOPY (8.4 Å)
主引用文献	Cryo-ET of Toxoplasma parasites gives subnanometer insight into tubulin-based structures. Proc.Natl.Acad.Sci.USA, 119, 2022

7R9J

Methanococcus maripaludis chaperonin, open conformation 4
分子名称:	Chaperonin
著者	Zhao, Y, Schmid, M, Frydman, J, Chiu, W.
登録日	2021-06-29
公開日	2021-08-11
最終更新日	2024-06-05
実験手法	ELECTRON MICROSCOPY (6.3 Å)
主引用文献	CryoEM reveals the stochastic nature of individual ATP binding events in a group II chaperonin. Nat Commun, 12, 2021

7R9I

Methanococcus maripaludis chaperonin, open conformation 2
分子名称:	Chaperonin
著者	Zhao, Y, Schmid, M, Frydman, J, Chiu, W.
登録日	2021-06-29
公開日	2021-08-11
最終更新日	2024-06-05
実験手法	ELECTRON MICROSCOPY (6.4 Å)
主引用文献	CryoEM reveals the stochastic nature of individual ATP binding events in a group II chaperonin. Nat Commun, 12, 2021

7R9K

Methanococcus maripaludis chaperonin, closed conformation 4
分子名称:	Chaperonin
著者	Zhao, Y, Schmid, M, Frydman, J, Chiu, W.
登録日	2021-06-29
公開日	2021-08-11
最終更新日	2024-06-05
実験手法	ELECTRON MICROSCOPY (4.1 Å)
主引用文献	CryoEM reveals the stochastic nature of individual ATP binding events in a group II chaperonin. Nat Commun, 12, 2021

7R9H

Methanococcus maripaludis chaperonin, open conformation 2
分子名称:	Chaperonin
著者	Zhao, Y, Schmid, M, Frydman, J, Chiu, W.
登録日	2021-06-29
公開日	2021-08-11
最終更新日	2024-06-05
実験手法	ELECTRON MICROSCOPY (6.3 Å)
主引用文献	CryoEM reveals the stochastic nature of individual ATP binding events in a group II chaperonin. Nat Commun, 12, 2021

7R9M

Methanococcus maripaludis chaperonin, closed conformation 2
分子名称:	Chaperonin
著者	Zhao, Y, Schmid, M, Frydman, J, Chiu, W.
登録日	2021-06-29
公開日	2021-08-11
最終更新日	2024-06-05
実験手法	ELECTRON MICROSCOPY (4 Å)
主引用文献	CryoEM reveals the stochastic nature of individual ATP binding events in a group II chaperonin. Nat Commun, 12, 2021

7R9E

Methanococcus maripaludis chaperonin, open conformation 1
分子名称:	Chaperonin
著者	Zhao, Y, Schmid, M, Frydman, J, Chiu, W.
登録日	2021-06-29
公開日	2021-08-11
最終更新日	2024-06-05
実験手法	ELECTRON MICROSCOPY (4 Å)
主引用文献	CryoEM reveals the stochastic nature of individual ATP binding events in a group II chaperonin. Nat Commun, 12, 2021

7RAK

Methanococcus maripaludis chaperonin complex in open conformation
分子名称:	ADENOSINE-5'-TRIPHOSPHATE, Chaperonin
著者	Zhao, Y, Schmid, M, Frydman, J, Chiu, W.
登録日	2021-07-01
公開日	2021-08-11
最終更新日	2024-06-05
実験手法	ELECTRON MICROSCOPY (3.9 Å)
主引用文献	CryoEM reveals the stochastic nature of individual ATP binding events in a group II chaperonin. Nat Commun, 12, 2021

7R9O

Methanococcus maripaludis chaperonin, closed conformation 1
分子名称:	Chaperonin
著者	Zhao, Y, Schmid, M, Frydman, J, Chiu, W.
登録日	2021-06-29
公開日	2021-08-11
最終更新日	2024-06-05
実験手法	ELECTRON MICROSCOPY (4 Å)
主引用文献	CryoEM reveals the stochastic nature of individual ATP binding events in a group II chaperonin. Nat Commun, 12, 2021

7R9U

Methanococcus maripaludis chaperonin, closed conformation 3
分子名称:	Chaperonin
著者	Zhao, Y, Schmid, M, Frydman, J, Chiu, W.
登録日	2021-06-29
公開日	2021-08-11
最終更新日	2024-06-05
実験手法	ELECTRON MICROSCOPY (4.4 Å)
主引用文献	CryoEM reveals the stochastic nature of individual ATP binding events in a group II chaperonin. Nat Commun, 12, 2021

6VQV

Type I-F CRISPR-Csy complex with its inhibitor AcrF9
分子名称:	AcrF9, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ...
著者	Zhang, K, Li, S, Pintilie, G, Zhu, Y, Huang, Z, Chiu, W.
登録日	2020-02-06
公開日	2020-03-11
最終更新日	2024-03-06
実験手法	ELECTRON MICROSCOPY (2.57 Å)
主引用文献	Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR-Cas complex revealed by cryo-EM. Proc.Natl.Acad.Sci.USA, 117, 2020

6VQX

Type I-F CRISPR-Csy complex with its inhibitor AcrF6
分子名称:	AcrF6, CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, ...
著者	Zhang, K, Li, S, Pintilie, G, Zhu, Y, Huang, Z, Chiu, W.
登録日	2020-02-06
公開日	2020-03-11
最終更新日	2024-03-06
実験手法	ELECTRON MICROSCOPY (3.15 Å)
主引用文献	Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR-Cas complex revealed by cryo-EM. Proc.Natl.Acad.Sci.USA, 117, 2020

8U26

Gaussian Mixture Models based single particle refinement - GPCR (Substance P bound to active human neurokinin 1 receptor in complex with miniGs399 from EMPIAR-10786)
分子名称:	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
著者	Chen, M, Pintilie, G.
登録日	2023-09-05
公開日	2023-11-15
最終更新日	2024-01-24
実験手法	ELECTRON MICROSCOPY (2.5 Å)
主引用文献	Improving resolution and resolvability of single-particle cryoEM structures using Gaussian mixture models. Nat.Methods, 21, 2024

8U2C

Gaussian mixture model based single particle refinement - ABC transporter (inhibitor-bound ABCG2 from EMPIAR-10374)
分子名称:	5D3 Fab heavy chain variable domain, 5D3 Fab light chain variable domain, Broad substrate specificity ATP-binding cassette transporter ABCG2, ...
著者	Chen, M, Pintilie, G.
登録日	2023-09-05
公開日	2023-11-15
最終更新日	2024-01-24
実験手法	ELECTRON MICROSCOPY (2.5 Å)
主引用文献	Improving resolution and resolvability of single-particle cryoEM structures using Gaussian mixture models. Nat.Methods, 21, 2024

8U28

Gaussian mixture model based single particle refinement - SARS (SARS-CoV-2 Spike Proteins on intact virions from EMPIAR-10492)
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者	Chen, M, Pintilie, G.
登録日	2023-09-05
公開日	2023-11-15
最終更新日	2024-01-24
実験手法	ELECTRON MICROSCOPY (3.1 Å)
主引用文献	Improving resolution and resolvability of single-particle cryoEM structures using Gaussian mixture models. Nat.Methods, 21, 2024

5NC5

Crystal structure of AcrBZ in complex with antibiotic puromycin
分子名称:	DARPin, DECANE, DODECANE, ...
著者	Du, D, Luisi, B.
登録日	2017-03-03
公開日	2017-04-12
最終更新日	2024-01-17
実験手法	X-RAY DIFFRACTION (3.2 Å)
主引用文献	An allosteric transport mechanism for the AcrAB-TolC Multidrug Efflux Pump. Elife, 6, 2017

5O66

Asymmetric AcrABZ-TolC
分子名称:	Multidrug efflux pump accessory protein AcrZ, Multidrug efflux pump subunit AcrA, Multidrug efflux pump subunit AcrB, ...
著者	Du, D, Luisi, B.F.
登録日	2017-06-05
公開日	2017-06-14
最終更新日	2024-05-08
実験手法	ELECTRON MICROSCOPY (5.9 Å)
主引用文献	An allosteric transport mechanism for the AcrAB-TolC multidrug efflux pump. Elife, 6, 2017

6NUD

Small conformation of ssRNA-bound CRISPR_Csm complex
分子名称:	ADENOSINE-5'-TRIPHOSPHATE, CRISPR system Cms protein Csm2, CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A), ...
著者	Zhang, K, Pintilie, G, Li, S, Zhu, Y, Chiu, W, Huang, Z.
登録日	2019-01-31
公開日	2019-03-13
最終更新日	2024-03-20
実験手法	ELECTRON MICROSCOPY (3.5 Å)
主引用文献	Coupling of ssRNA cleavage with DNase activity in type III-A CRISPR-Csm revealed by cryo-EM and biochemistry. Cell Res., 29, 2019

6NUE

Small conformation of apo CRISPR_Csm complex
分子名称:	ADENOSINE-5'-TRIPHOSPHATE, CRISPR system Cms protein Csm2, CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A), ...
著者	Zhang, K, Pintilie, G, Li, S, Zhu, Y, Chiu, W, Huang, Z.
登録日	2019-01-31
公開日	2019-03-13
最終更新日	2024-03-20
実験手法	ELECTRON MICROSCOPY (3.3 Å)
主引用文献	Coupling of ssRNA cleavage with DNase activity in type III-A CRISPR-Csm revealed by cryo-EM and biochemistry. Cell Res., 29, 2019

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表示件数:	25
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