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6PKH
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BU of 6pkh by Molmil
Zebrafish N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase (NAGPA) catalytic domain auto-inhibited by pro-peptide
分子名称: N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Gorelik, A, Illes, K, Nagar, B.
登録日2019-06-29
公開日2020-02-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of the Mannose-6-Phosphate Uncovering Enzyme.
Structure, 28, 2020
6PKI
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BU of 6pki by Molmil
Zebrafish N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase (NAGPA) catalytic domain (C56S C230S) in complex with N-acetyl-alpha-D-glucosamine (alpha-GlcNAc) and mannose 6-phosphate (M6P)
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 6-O-phosphono-alpha-D-mannopyranose, ...
著者Gorelik, A, Illes, K, Nagar, B.
登録日2019-06-29
公開日2020-02-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.293 Å)
主引用文献Crystal Structure of the Mannose-6-Phosphate Uncovering Enzyme.
Structure, 28, 2020
6PKU
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BU of 6pku by Molmil
Guinea pig N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase (NAGPA) catalytic domain (C51S C221S) in complex with N-acetyl-alpha-D-glucosamine (alpha-GlcNAc) and mannose 6-phosphate (M6P)
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 6-O-phosphono-alpha-D-mannopyranose, ...
著者Gorelik, A, Illes, K, Nagar, B.
登録日2019-06-29
公開日2020-02-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.949 Å)
主引用文献Crystal Structure of the Mannose-6-Phosphate Uncovering Enzyme.
Structure, 28, 2020
5W5I
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BU of 5w5i by Molmil
Human IFIT1 dimer with PPP-AAAA
分子名称: Interferon-induced protein with tetratricopeptide repeats 1, RNA (5'-D(*(ATP))-R(P*AP*AP*A)-3')
著者Abbas, Y.M, Martinez-Montero, S, Damha, M.J, Nagar, B.
登録日2017-06-15
公開日2017-06-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural insights into IFIT1 dimerization and conformational changes associated with mRNA binding
To Be Published
5W5H
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BU of 5w5h by Molmil
Human IFIT1 dimer with m7Gppp-AAAA
分子名称: Interferon-induced protein with tetratricopeptide repeats 1, RNA (5'-D(*(GTA))-R(P*AP*AP*A)-3')
著者Abbas, Y.M, Martinez-Montero, S, Damha, M.J, Nagar, B.
登録日2017-06-15
公開日2017-07-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structural insights into IFIT1 dimerization and conformational changes associated with mRNA binding
To Be Published
5W7E
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BU of 5w7e by Molmil
Murine acyloxyacyl hydrolase (AOAH), S262A mutant, with dimyristoyl phosphatidylcholine
分子名称: (2S)-3-hydroxypropane-1,2-diyl ditetradecanoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, Acyloxyacyl hydrolase, ...
著者Gorelik, A, Illes, K, Nagar, B.
登録日2017-06-19
公開日2018-01-03
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Crystal structure of the mammalian lipopolysaccharide detoxifier.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5W78
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BU of 5w78 by Molmil
Human acyloxyacyl hydrolase (AOAH), proteolytically processed
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Acyloxyacyl hydrolase, CALCIUM ION, ...
著者Gorelik, A, Illes, K, Nagar, B.
登録日2017-06-19
公開日2018-01-03
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.271 Å)
主引用文献Crystal structure of the mammalian lipopolysaccharide detoxifier.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5W7A
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BU of 5w7a by Molmil
Rabbit acyloxyacyl hydrolase (AOAH), proteolytically processed, S262A mutant, with LPS (low quality saposin domain)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-HYDROXY-TETRADECANOIC ACID, ...
著者Gorelik, A, Illes, K, Nagar, B.
登録日2017-06-19
公開日2018-01-03
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the mammalian lipopolysaccharide detoxifier.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5W7D
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BU of 5w7d by Molmil
Murine acyloxyacyl hydrolase (AOAH), S262A mutant
分子名称: 1,2-DISTEAROYL-SN-GLYCERO-3-PHOSPHATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Gorelik, A, Illes, K, Nagar, B.
登録日2017-06-19
公開日2018-01-03
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of the mammalian lipopolysaccharide detoxifier.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5W7C
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BU of 5w7c by Molmil
Human acyloxyacyl hydrolase (AOAH), proteolytically processed, S263A mutant, with LPS
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-HYDROXY-TETRADECANOIC ACID, ...
著者Gorelik, A, Illes, K, Nagar, B.
登録日2017-06-19
公開日2018-01-03
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Crystal structure of the mammalian lipopolysaccharide detoxifier.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5W7F
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BU of 5w7f by Molmil
Murine acyloxyacyl hydrolase (AOAH), S262A mutant, with lipid A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-amino-2-deoxy-beta-D-glucopyranose, 3-HYDROXY-TETRADECANOIC ACID, ...
著者Gorelik, A, Illes, K, Nagar, B.
登録日2017-06-19
公開日2018-01-03
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the mammalian lipopolysaccharide detoxifier.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5W7B
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BU of 5w7b by Molmil
Rabbit acyloxyacyl hydrolase (AOAH), proteolytically processed, S262A mutant, with LPS
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Gorelik, A, Illes, K, Nagar, B.
登録日2017-06-19
公開日2018-01-03
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the mammalian lipopolysaccharide detoxifier.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3LUD
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BU of 3lud by Molmil
Crystal structure of MID domain from hAGO2 in complex with AMP
分子名称: ADENOSINE MONOPHOSPHATE, PHOSPHATE ION, Protein argonaute-2
著者Frank, F, Sonenberg, N, Nagar, B.
登録日2010-02-17
公開日2010-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.095 Å)
主引用文献Structural basis for 5'-nucleotide base-specific recognition of guide RNA by human AGO2.
Nature, 465, 2010
3LUK
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BU of 3luk by Molmil
Crystal structure of MID domain from hAGO2
分子名称: GLYCEROL, PHOSPHATE ION, Protein argonaute-2
著者Frank, F, Sonenberg, N, Nagar, B.
登録日2010-02-17
公開日2010-05-26
最終更新日2014-04-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for 5'-nucleotide base-specific recognition of guide RNA by human AGO2.
Nature, 465, 2010
3LUH
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BU of 3luh by Molmil
Crystal structure of MID domain from hAGO2 in complex with GMP
分子名称: GUANOSINE-5'-MONOPHOSPHATE, PHOSPHATE ION, Protein argonaute-2
著者Frank, F, Sonenberg, N, Nagar, B.
登録日2010-02-17
公開日2010-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Structural basis for 5'-nucleotide base-specific recognition of guide RNA by human AGO2.
Nature, 465, 2010
3LUG
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BU of 3lug by Molmil
Crystal structure of MID domain from hAGO2 in complex with CMP
分子名称: CYTIDINE-5'-MONOPHOSPHATE, PHOSPHATE ION, Protein argonaute-2
著者Frank, F, Sonenberg, N, Nagar, B.
登録日2010-02-17
公開日2010-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.849 Å)
主引用文献Structural basis for 5'-nucleotide base-specific recognition of guide RNA by human AGO2.
Nature, 465, 2010
3LUJ
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BU of 3luj by Molmil
Crystal structure of MID domain from hAGO2 in complex with UMP
分子名称: Protein argonaute-2, URIDINE-5'-MONOPHOSPHATE
著者Frank, F, Sonenberg, N, Nagar, B.
登録日2010-02-17
公開日2010-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.796 Å)
主引用文献Structural basis for 5'-nucleotide base-specific recognition of guide RNA by human AGO2.
Nature, 465, 2010
3LUC
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BU of 3luc by Molmil
Crystal structure of MID domain from hAGO2
分子名称: PHOSPHATE ION, Protein argonaute-2
著者Frank, F, Sonenberg, N, Nagar, B.
登録日2010-02-17
公開日2010-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.691 Å)
主引用文献Structural basis for 5'-nucleotide base-specific recognition of guide RNA by human AGO2.
Nature, 465, 2010
1NVU
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BU of 1nvu by Molmil
Structural evidence for feedback activation by RasGTP of the Ras-specific nucleotide exchange factor SOS
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Margarit, S.M, Sondermann, H, Hall, B.E, Nagar, B, Hoelz, A, Pirruccello, M, Bar-Sagi, D, Kuriyan, J.
登録日2003-02-04
公開日2003-04-01
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural evidence for feedback activation by RasGTP of the Ras-specific nucleotide exchange factor SOS
Cell(Cambridge,Mass.), 112, 2003
1JZN
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BU of 1jzn by Molmil
crystal structure of a galactose-specific C-type lectin
分子名称: CALCIUM ION, CHLORIDE ION, Galactose-specific lectin, ...
著者Walker, J.R, Nagar, B, Young, N.M, Hirama, T, Rini, J.M.
登録日2001-09-16
公開日2003-07-01
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献X-ray Crystal Structure of a Galactose-Specific C-Type Lectin Possessing a Novel Decameric Quaternary Structure.
Biochemistry, 43, 2004
3QX9
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BU of 3qx9 by Molmil
Crystal structure of MID domain from hAGO2 in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Protein argonaute-2
著者Frank, F, Fabian, M.R, Stepinski, J, Jemielity, J, Darzynkiewicz, E, Sonenberg, N, Nagar, B.
登録日2011-03-01
公開日2011-04-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural analysis of 5'-mRNA-cap interactions with the human AGO2 MID domain.
Embo Rep., 12, 2011
3QX8
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BU of 3qx8 by Molmil
Crystal structure of MID domain from hAGO2 in complex with m7GpppG
分子名称: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, Protein argonaute-2
著者Frank, F, Fabian, M.R, Stepinski, J, Jemielity, J, Darzynkiewicz, E, Sonenberg, N, Nagar, B.
登録日2011-03-01
公開日2011-04-20
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural analysis of 5'-mRNA-cap interactions with the human AGO2 MID domain.
Embo Rep., 12, 2011
1MUQ
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BU of 1muq by Molmil
X-ray Crystal Structure of Rattlesnake Venom Complexed With Thiodigalactoside
分子名称: 1-thio-beta-D-galactopyranose-(1-1)-beta-D-galactopyranose, CALCIUM ION, Galactose-specific lectin, ...
著者Walker, J.R, Nagar, B, Young, N.M, Hirama, T, Rini, J.M.
登録日2002-09-24
公開日2003-07-01
最終更新日2020-10-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献X-ray Crystal Structure of a Galactose-Specific C-Type Lectin Possessing a Novel Decameric Quaternary Structure.
Biochemistry, 43, 2004
4G0X
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BU of 4g0x by Molmil
Crystal Structure of Arabidopsis thaliana AGO1 MID domain
分子名称: Protein argonaute 1, SULFATE ION
著者Frank, F, Hauver, J, Sonenberg, N, Nagar, B.
登録日2012-07-10
公開日2012-07-25
最終更新日2012-09-12
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Arabidopsis Argonaute MID domains use their nucleotide specificity loop to sort small RNAs.
Embo J., 31, 2012
4G0P
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BU of 4g0p by Molmil
Crystal Structure of Arabidopsis thaliana AGO1 MID domain in complex with UMP
分子名称: Protein argonaute 1, URIDINE-5'-MONOPHOSPHATE
著者Frank, F, Hauver, J, Sonenberg, N, Nagar, B.
登録日2012-07-09
公開日2012-07-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Arabidopsis Argonaute MID domains use their nucleotide specificity loop to sort small RNAs.
Embo J., 31, 2012

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