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4Z8U
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CRYSTAL STRUCTURE OF AvrRxo1-ORF1:-ORF2 WITH ATP
分子名称: ACETATE ION, AvrRxo1-ORF1, AvrRxo1-ORF2, ...
著者Han, Q, Zhou, C, Wu, S, Liu, Y, Yang, Z, Miao, J, Triplett, L, Cheng, Q, Tokuhisa, J, Deblais, L, Robinson, H, Leach, J.E, Li, J, Zhao, B.
登録日2015-04-09
公開日2015-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal Structure of Xanthomonas AvrRxo1-ORF1, a Type III Effector with a Polynucleotide Kinase Domain, and Its Interactor AvrRxo1-ORF2.
Structure, 23, 2015
4Z8T
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CRYSTAL STRUCTURE OF AvrRxo1-ORF1:AvrRxo1-ORF2 WITH SULPHATE IONS
分子名称: ACETATE ION, AvrRxo1-ORF1, AvrRxo1-ORF2, ...
著者Han, Q, Zhou, C, Wu, S, Liu, Y, Yang, Z, Miao, J, Triplett, L, Cheng, Q, Tokuhisa, J, Deblais, L, Robinson, H, Leach, J.E, Li, J, Zhao, B.
登録日2015-04-09
公開日2015-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Crystal Structure of Xanthomonas AvrRxo1-ORF1, a Type III Effector with a Polynucleotide Kinase Domain, and Its Interactor AvrRxo1-ORF2.
Structure, 23, 2015
4Z8V
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CRYSTAL STRUCTURE OF AVRRXO1-ORF1:-ORF2 COMPLEX, NATIVE.
分子名称: AvrRxo1-ORF1, AvrRxo1-ORF2, PHOSPHATE ION
著者Han, Q, Zhou, C, Wu, S, Liu, Y, Yang, Z, Miao, J, Triplett, L, Cheng, Q, Tokuhisa, J, Deblais, L, Robinson, H, Leach, J.E, Li, J, Zhao, B.
登録日2015-04-09
公開日2015-09-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of Xanthomonas AvrRxo1-ORF1, a Type III Effector with a Polynucleotide Kinase Domain, and Its Interactor AvrRxo1-ORF2.
Structure, 23, 2015
4Z8Q
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BU of 4z8q by Molmil
CRYSTAL STRUCTURE OF AvrRxo1-ORF1:AvrRxo1-ORF2 COMPLEX, SELENOMETHIONINE SUBSTITUTED.
分子名称: AvrRxo1-ORF1, AvrRxo1-ORF2, PHOSPHATE ION
著者Han, Q, Zhou, C, Wu, S, Liu, Y, Yang, Z, Miao, J, Triplett, L, Cheng, Q, Tokuhisa, J, Deblais, L, Robinson, H, Leach, J.E, Li, J, Zhao, B.
登録日2015-04-09
公開日2015-09-23
最終更新日2022-03-16
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal Structure of Xanthomonas AvrRxo1-ORF1, a Type III Effector with a Polynucleotide Kinase Domain, and Its Interactor AvrRxo1-ORF2.
Structure, 23, 2015
398D
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BU of 398d by Molmil
3'-DNA-RNA-5' JUNCTION FORMED DURING INITIATION OF MINUS-STRAND SYNTHESIS OF HIV REPLICATION
分子名称: DNA/RNA (5'-R(*GP*CP*CP*AP)-D(*CP*TP*GP*C)-3'), RNA (5'-R(*GP*CP*AP*GP*UP*GP*GP*C)-3')
著者Mueller, U, Meier, G, Mochi-Onori, A, Cellai, L, Heumann, H.
登録日1998-05-04
公開日1998-10-06
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of an eight-base pair duplex containing the 3'-DNA-RNA-5' junction formed during initiation of minus-strand synthesis of HIV replication.
Biochemistry, 37, 1998
1XYJ
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BU of 1xyj by Molmil
NMR Structure of the cat prion protein
分子名称: prion protein
著者Lysek, D.A, Schorn, C, Nivon, L.G, Esteve-Moya, V, Christen, B, Calzolai, L, von Schroetter, C, Fiorito, F, Herrmann, T, Guntert, P.
登録日2004-11-10
公開日2005-01-04
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Prion protein NMR structures of cats, dogs, pigs, and sheep
Proc.Natl.Acad.Sci.USA, 102, 2005
1BYX
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BU of 1byx by Molmil
CHIMERIC HYBRID DUPLEX R(GCAGUGGC).R(GCCA)D(CTGC) COMPRISING THE TRNA-DNA JUNCTION FORMED DURING INITIATION OF HIV-1 REVERSE TRANSCRIPTION
分子名称: DNA/RNA (5'-R(*GP*CP*CP*A)-D(P*CP*TP*GP*C)-3'), RNA (5'-R(*GP*CP*AP*GP*UP*GP*GP*C)-3')
著者Szyperski, T, Goette, M, Billeter, M, Perola, E, Cellai, L.
登録日1998-10-20
公開日1999-10-20
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR structure of the chimeric hybrid duplex r(gcaguggc).r(gcca)d(CTGC) comprising the tRNA-DNA junction formed during initiation of HIV-1 reverse transcription.
J.Biomol.NMR, 13, 1999
1EKE
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BU of 1eke by Molmil
CRYSTAL STRUCTURE OF CLASS II RIBONUCLEASE H (RNASE HII) WITH MES LIGAND
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, RIBONUCLEASE HII
著者Lai, L.H, Yokota, H, Hung, L.W, Kim, R, Kim, S.H, Berkeley Structural Genomics Center (BSGC)
登録日2000-03-07
公開日2000-09-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of archaeal RNase HII: a homologue of human major RNase H
Structure, 8, 2000
1XU0
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BU of 1xu0 by Molmil
Solution structure of Xenopus leavis prion protein
分子名称: prion protein
著者Perez, D.R, Wuthrich, K.
登録日2004-10-25
公開日2005-01-04
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Prion protein NMR structures of chicken, turtle, and frog
PROC.NATL.ACAD.SCI.USA, 102, 2005
4FZP
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BU of 4fzp by Molmil
Crystal Structure of the uranyl binding protein complexed with uranyl
分子名称: URANYL (VI) ION, uranyl binding protein
著者Zhou, L, Zhang, L, He, C.
登録日2012-07-06
公開日2013-12-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献A protein engineered to bind uranyl selectively and with femtomolar affinity.
Nat Chem, 6, 2014
4FZO
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BU of 4fzo by Molmil
Crystal Structure of the apo-form uranyl binding protein
分子名称: uranyl binding protein
著者He, C, Zhou, L, Zhang, L.
登録日2012-07-06
公開日2013-12-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献A protein engineered to bind uranyl selectively and with femtomolar affinity.
Nat Chem, 6, 2014
7U0P
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SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-S21F2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Patel, A, Ortlund, E.
登録日2022-02-18
公開日2022-08-10
最終更新日2023-02-22
実験手法ELECTRON MICROSCOPY (3.76 Å)
主引用文献Structural insights for neutralization of Omicron variants BA.1, BA.2, BA.4, and BA.5 by a broadly neutralizing SARS-CoV-2 antibody.
Sci Adv, 8, 2022
7U0Q
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SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-02
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Patel, A, Ortlund, E.
登録日2022-02-18
公開日2023-03-01
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (3.86 Å)
主引用文献Molecular basis of SARS-CoV-2 Omicron variant evasion from shared neutralizing antibody response.
Structure, 31, 2023
7U0X
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SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-13
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Patel, A, Ortlund, E.
登録日2022-02-19
公開日2023-03-01
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (3.82 Å)
主引用文献Molecular basis of SARS-CoV-2 Omicron variant evasion from shared neutralizing antibody response.
Structure, 31, 2023
7UPL
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BU of 7upl by Molmil
SARS-Cov2 Omicron varient S protein structure in complex with neutralizing monoclonal antibody 002-S21F2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Patel, A, Ortlund, E.
登録日2022-04-15
公開日2022-08-10
最終更新日2023-02-22
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural insights for neutralization of Omicron variants BA.1, BA.2, BA.4, and BA.5 by a broadly neutralizing SARS-CoV-2 antibody.
Sci Adv, 8, 2022
7UOW
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SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 034_32
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Monoclonal antibody 034_32 heavy chain, ...
著者Patel, A, Ortlund, E.
登録日2022-04-14
公開日2023-04-19
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Molecular basis of SARS-CoV-2 Omicron variant evasion from shared neutralizing antibody response.
Structure, 31, 2023
2AYD
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BU of 2ayd by Molmil
Crystal Structure of the C-terminal WRKY domainof AtWRKY1, an SA-induced and partially NPR1-dependent transcription factor
分子名称: SUCCINIC ACID, WRKY transcription factor 1, ZINC ION
著者Duan, M.R, Nan, J, Li, Y, Su, X.D.
登録日2005-09-07
公開日2006-10-31
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献DNA binding mechanism revealed by high resolution crystal structure of Arabidopsis thaliana WRKY1 protein.
Nucleic Acids Res., 35, 2007
6K0R
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BU of 6k0r by Molmil
Ruvbl1-Ruvbl2 with truncated domain II in complex with phosphorylated Cordycepin
分子名称: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Zhang, W, Chen, L, Li, W, Ju, D, Huang, N, Zhang, E.
登録日2019-05-07
公開日2020-05-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Chemical perturbations reveal that RUVBL2 regulates the circadian phase in mammals.
Sci Transl Med, 12, 2020
3EJC
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BU of 3ejc by Molmil
Full length Receptor Binding Protein from Lactococcal phage TP901-1
分子名称: Baseplate protein (BPP)
著者Spinelli, S, Lichiere, J, Blangy, S, Sciara, G, Cambillau, C, Campanacci, V.
登録日2008-09-18
公開日2009-10-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure and molecular assignment of lactococcal phage TP901-1 baseplate.
J.Biol.Chem., 285, 2010
2LL4
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HADDOCK structure of TgMIC4-A5/lacto-N-biose complex, based on NOE-derived distance restraints
分子名称: Micronemal protein 4, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Cowper, B, Matthews, S.
登録日2011-10-26
公開日2012-04-04
最終更新日2020-07-29
実験手法SOLUTION NMR
主引用文献Galactose Recognition by the Apicomplexan Parasite Toxoplasma gondii.
J.Biol.Chem., 287, 2012
2LL3
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The solution structure of TgMIC4 apple-5 domain
分子名称: Micronemal protein 4
著者Cowper, B, Matthews, S.
登録日2011-10-26
公開日2012-04-04
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Galactose Recognition by the Apicomplexan Parasite Toxoplasma gondii.
J.Biol.Chem., 287, 2012
2F3I
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BU of 2f3i by Molmil
Solution Structure of a Subunit of RNA Polymerase II
分子名称: DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide
著者Kang, X, Jin, C.
登録日2005-11-21
公開日2006-05-02
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structural, biochemical, and dynamic characterizations of the hRPB8 subunit of human RNA polymerases
J.Biol.Chem., 281, 2006
4TUR
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BU of 4tur by Molmil
Human DNA polymerase beta inserting dCMPNPP opposite the 5'G of cisplatin crosslinked Gs (Pt-GG2)
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, Cisplatin, DNA (5'-D(*CP*CP*CP*AP*CP*GP*GP*CP*CP*CP*AP*TP*CP*AP*CP*C)-3'), ...
著者Koag, M.C, Lee, S.
登録日2014-06-24
公開日2014-10-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.169 Å)
主引用文献Structural Basis for the Inefficient Nucleotide Incorporation Opposite Cisplatin-DNA Lesion by Human DNA Polymerase beta.
J.Biol.Chem., 289, 2014
4TUS
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Human DNA polymerase beta inserting dCMPNPP opposite the 5'G of cisplatin crosslinked Gs (Pt-GG2) WITH MANGANESE IN THE ACTIVE SITE.
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, Cisplatin, DNA (5'-D(*CP*CP*CP*AP*CP*GP*GP*CP*CP*CP*AP*TP*CP*AP*CP*C)-3'), ...
著者Koag, M.C, Lee, S.
登録日2014-06-24
公開日2014-10-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Structural Basis for the Inefficient Nucleotide Incorporation Opposite Cisplatin-DNA Lesion by Human DNA Polymerase beta.
J.Biol.Chem., 289, 2014
4TUQ
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Human DNA polymerase beta inserting dCMPNPP opposite GG template (GG0b).
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*CP*CP*CP*AP*CP*GP*GP*CP*CP*CP*AP*TP*CP*AP*CP*C)-3'), DNA (5'-D(*GP*GP*TP*GP*AP*TP*GP*GP*GP*C)-3'), ...
著者Koag, M.C, Lee, S.
登録日2014-06-24
公開日2014-10-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.367 Å)
主引用文献Structural Basis for the Inefficient Nucleotide Incorporation Opposite Cisplatin-DNA Lesion by Human DNA Polymerase beta.
J.Biol.Chem., 289, 2014

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