Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6EF9
DownloadVisualize
BU of 6ef9 by Molmil
GspB Siglec domain
分子名称: FORMIC ACID, Platelet binding protein GspB - Siglec domain, SODIUM ION
著者Iverson, T.M.
登録日2018-08-16
公開日2020-02-19
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Origins of glycan selectivity in streptococcal Siglec-like adhesins suggest mechanisms of receptor adaptation.
Nat Commun, 13, 2022
6EFD
DownloadVisualize
BU of 6efd by Molmil
Hsa Siglec and Unique domains in complex with the sialyl T antigen trisaccharide
分子名称: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose, SODIUM ION, Streptococcal hemagglutinin
著者Iverson, T.M.
登録日2018-08-16
公開日2020-02-19
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Origins of glycan selectivity in streptococcal Siglec-like adhesins suggest mechanisms of receptor adaptation.
Nat Commun, 13, 2022
6EFF
DownloadVisualize
BU of 6eff by Molmil
NCTC10712
分子名称: ACETATE ION, CALCIUM ION, GLYCEROL, ...
著者Iverson, T.M.
登録日2018-08-16
公開日2020-02-19
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Origins of glycan selectivity in streptococcal Siglec-like adhesins suggest mechanisms of receptor adaptation.
Nat Commun, 13, 2022
6EFB
DownloadVisualize
BU of 6efb by Molmil
GspB Siglec domain
分子名称: CALCIUM ION, GLYCEROL, SK150 siglec + Unique, ...
著者Iverson, T.M.
登録日2018-08-16
公開日2020-02-19
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Origins of glycan selectivity in streptococcal Siglec-like adhesins suggest mechanisms of receptor adaptation.
Nat Commun, 13, 2022
6EF7
DownloadVisualize
BU of 6ef7 by Molmil
GspB Siglec domain
分子名称: CALCIUM ION, Platelet binding protein GspB
著者Iverson, T.M.
登録日2018-08-16
公開日2020-02-19
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献Origins of glycan selectivity in streptococcal Siglec-like adhesins suggest mechanisms of receptor adaptation.
Nat Commun, 13, 2022
6EFA
DownloadVisualize
BU of 6efa by Molmil
GspB Siglec + Unique domains
分子名称: CALCIUM ION, Platelet binding protein GspB
著者Iverson, T.M.
登録日2018-08-16
公開日2020-02-19
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Origins of glycan selectivity in streptococcal Siglec-like adhesins suggest mechanisms of receptor adaptation.
Nat Commun, 13, 2022
3TWZ
DownloadVisualize
BU of 3twz by Molmil
Phosphorylated Bacillus cereus phosphopentomutase in space group P212121
分子名称: MANGANESE (II) ION, Phosphopentomutase
著者Panosian, T.P, Nanneman, D.P, Bachmann, B.O, Iverson, T.M.
登録日2011-09-22
公開日2012-02-29
最終更新日2012-03-21
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Molecular Differences between a Mutase and a Phosphatase: Investigations of the Activation Step in Bacillus cereus Phosphopentomutase.
Biochemistry, 51, 2012
3TX0
DownloadVisualize
BU of 3tx0 by Molmil
Unphosphorylated Bacillus cereus phosphopentomutase in a P212121 crystal form
分子名称: MANGANESE (II) ION, Phosphopentomutase
著者Panosian, T.P, Nanneman, D.P, Bachmann, B.O, Iverson, T.M.
登録日2011-09-22
公開日2012-02-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Molecular Differences between a Mutase and a Phosphatase: Investigations of the Activation Step in Bacillus cereus Phosphopentomutase.
Biochemistry, 51, 2012
3M8W
DownloadVisualize
BU of 3m8w by Molmil
Phosphopentomutase from Bacillus cereus
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, MANGANESE (II) ION, ...
著者Panosian, T.D, Nannemann, D.P, Watkins, G, Wadzinski, B, Bachmann, B.O, Iverson, T.M.
登録日2010-03-19
公開日2010-12-29
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Bacillus cereus Phosphopentomutase Is an Alkaline Phosphatase Family Member That Exhibits an Altered Entry Point into the Catalytic Cycle.
J.Biol.Chem., 286, 2011
3M8Y
DownloadVisualize
BU of 3m8y by Molmil
Phosphopentomutase from Bacillus cereus after glucose-1,6-bisphosphate activation
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, GLYCEROL, ...
著者Panosian, T.D, Nannemann, D.P, Watkins, G, Wadzinski, B, Bachmann, B.O, Iverson, T.M.
登録日2010-03-19
公開日2010-12-29
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Bacillus cereus Phosphopentomutase Is an Alkaline Phosphatase Family Member That Exhibits an Altered Entry Point into the Catalytic Cycle.
J.Biol.Chem., 286, 2011
1S5L
DownloadVisualize
BU of 1s5l by Molmil
Architecture of the photosynthetic oxygen evolving center
分子名称: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE, BETA-CAROTENE, BICARBONATE ION, ...
著者Ferreira, K.N, Iverson, T.M, Maghlaoui, K, Barber, J, Iwata, S.
登録日2004-01-21
公開日2004-02-24
最終更新日2021-03-03
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Architecture of the Photosynthetic Oxygen-Evolving Center
Science, 303, 2004
4H0O
DownloadVisualize
BU of 4h0o by Molmil
Crystal Structure of Acetate Kinase from Entamoeba histolytica
分子名称: Acetate kinase
著者Thaker, T.M, Tanabe, M, Iverson, T.M.
登録日2012-09-09
公開日2012-12-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of acetate kinases from the eukaryotic pathogens Entamoeba histolytica and Cryptococcus neoformans.
J.Struct.Biol., 181, 2013
4H0P
DownloadVisualize
BU of 4h0p by Molmil
Crystal Structure of Acetate Kinase from Cryptococcus neoformans
分子名称: acetate kinase
著者Thaker, T.M, Iverson, T.M.
登録日2012-09-09
公開日2012-12-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.894 Å)
主引用文献Crystal structures of acetate kinases from the eukaryotic pathogens Entamoeba histolytica and Cryptococcus neoformans.
J.Struct.Biol., 181, 2013
3CIR
DownloadVisualize
BU of 3cir by Molmil
E. coli Quinol fumarate reductase FrdA T234A mutation
分子名称: FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Tomasiak, T.M, Maklashina, E, Cecchini, G, Iverson, T.M.
登録日2008-03-11
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.65 Å)
主引用文献A threonine on the active site loop controls transition state formation in Escherichia coli respiratory complex II.
J.Biol.Chem., 283, 2008
5VPN
DownloadVisualize
BU of 5vpn by Molmil
E. coli Quinol fumarate reductase FrdA E245Q mutation
分子名称: FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Starbird, C.A, Maklashina, E, Sharma, P, Qualls-Histed, S, Cecchini, G, Iverson, T.M.
登録日2017-05-05
公開日2017-06-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (4.2232 Å)
主引用文献Structural and biochemical analyses reveal insights into covalent flavinylation of the Escherichia coli Complex II homolog quinol:fumarate reductase.
J. Biol. Chem., 292, 2017
7JT9
DownloadVisualize
BU of 7jt9 by Molmil
Fgr SH3 domain crystal structure
分子名称: Tyrosine-protein kinase Fgr
著者Perez, I, Berndt, S, Gurevich, V.V, Iverson, T.M.
登録日2020-08-17
公開日2022-01-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献A Model for the Signal Initiation Complex Between Arrestin-3 and the Src Family Kinase Fgr.
J.Mol.Biol., 434, 2022
5IUC
DownloadVisualize
BU of 5iuc by Molmil
Crystal structure of the GspB siglec domain with sialyl T antigen bound
分子名称: MAGNESIUM ION, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose, Platelet binding protein GspB
著者Loukachevitch, L.V, Fialkowski, K.P, Wawrzak, Z, Iverson, T.M.
登録日2016-03-17
公開日2016-04-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.253 Å)
主引用文献A structural model for binding of the serine-rich repeat adhesin GspB to host carbohydrate receptors.
PLoS Pathog., 7, 2011
8DYE
DownloadVisualize
BU of 8dye by Molmil
Crystal structure of human SDHA-SDHAF4 assembly intermediate
分子名称: 1,2-ETHANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
著者Sharma, P, Maklashina, E, Cecchini, G, Iverson, T.M.
登録日2022-08-04
公開日2024-01-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Disordered-to-ordered transitions in assembly factors allow the complex II catalytic subunit to switch binding partners.
Nat Commun, 15, 2024
8DYD
DownloadVisualize
BU of 8dyd by Molmil
Crystal structure of human SDHA-SDHAF2-SDHAF4 assembly intermediate
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Sharma, P, Maklashina, E, Cecchini, G, Iverson, T.M.
登録日2022-08-04
公開日2024-01-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Disordered-to-ordered transitions in assembly factors allow the complex II catalytic subunit to switch binding partners.
Nat Commun, 15, 2024
3IGA
DownloadVisualize
BU of 3iga by Molmil
Potassium Channel KcsA-Fab complex in Li+ and K+
分子名称: Antibody Fab Fragment heavy chain, Antibody Fab fragment light chain, DIACYL GLYCEROL, ...
著者Thompson, A.N, Ilsoo, K, Panosian, T.D, Iverson, T.M, Allen, T.W, Nimigean, C.M.
登録日2009-07-27
公開日2009-11-17
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Mechanism of potassium-channel selectivity revealed by Na(+) and Li(+) binding sites within the KcsA pore.
Nat.Struct.Mol.Biol., 16, 2009
2B76
DownloadVisualize
BU of 2b76 by Molmil
E. coli Quinol fumarate reductase FrdA E49Q mutation
分子名称: CITRATE ANION, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
著者Maklashina, E, Iverson, T.M, Sher, Y, Kotlyar, V, Mirza, O, Andrell, J, Hudson, J.M, Armstrong, F.A, Cecchini, G.
登録日2005-10-03
公開日2006-02-21
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Fumarate Reductase and Succinate Oxidase Activity of Escherichia coli Complex II Homologs Are Perturbed Differently by Mutation of the Flavin Binding Domain
J.Biol.Chem., 281, 2006
6NMW
DownloadVisualize
BU of 6nmw by Molmil
Crystal structure of the human Lyn SH3 domain
分子名称: Tyrosine-protein kinase Lyn
著者Berndt, S, Gurevich, V.V, Iverson, T.M.
登録日2019-01-12
公開日2019-04-17
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.199 Å)
主引用文献Crystal structure of the SH3 domain of human Lyn non-receptor tyrosine kinase.
PLoS ONE, 14, 2019
8FTE
DownloadVisualize
BU of 8fte by Molmil
CryoEM strucutre of 22-mer RBM2 of the Salmonella MS-ring
分子名称: Flagellar M-ring protein
著者Singh, P.S, Nakagawa, T, Cecchini, G, Iverson, T.M.
登録日2023-01-12
公開日2023-05-31
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献CryoEM structure of a post-assembly MS-ring reveals plasticity in stoichiometry and conformation.
Plos One, 18, 2023
8FTF
DownloadVisualize
BU of 8ftf by Molmil
CryoEM strucutre of 33-mer RBM3 of the Salmonella MS-ring
分子名称: Flagellar M-ring protein
著者Singh, P.S, Nakagawa, T, Cecchini, G, Iverson, T.M.
登録日2023-01-12
公開日2023-05-31
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献CryoEM structure of a post-assembly MS-ring reveals plasticity in stoichiometry and conformation.
Plos One, 18, 2023
3P4P
DownloadVisualize
BU of 3p4p by Molmil
Crystal structure of Menaquinol:fumarate oxidoreductase in complex with fumarate
分子名称: FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Tomasiak, T.M, Archuleta, T.L, Andr ll, J, Luna-Ch vez, C, Davis, T.A, Sarwar, M, Ham, A.J, McDonald, W.H, Yankowskaya, V, Stern, H.A, Johnston, J.N, Maklashina, E, Cecchini, G, Iverson, T.M.
登録日2010-10-06
公開日2010-12-01
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Geometric restraint drives on- and off-pathway catalysis by the Escherichia coli menaquinol:fumarate reductase.
J.Biol.Chem., 286, 2011

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon