Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5X5F
DownloadVisualize
BU of 5x5f by Molmil
Prefusion structure of MERS-CoV spike glycoprotein, conformation 2
分子名称: S protein
著者Yuan, Y, Cao, D, Zhang, Y, Ma, J, Qi, J, Wang, Q, Lu, G, Wu, Y, Yan, J, Shi, Y, Zhang, X, Gao, G.F.
登録日2017-02-15
公開日2017-05-03
最終更新日2017-05-24
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-EM structures of MERS-CoV and SARS-CoV spike glycoproteins reveal the dynamic receptor binding domains
Nat Commun, 8, 2017
4JUH
DownloadVisualize
BU of 4juh by Molmil
Crystal structure of 1918 pandemic influenza virus hemagglutinin mutant D225G complexed with avian receptor analogue LSTa
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Zhang, W, Shi, Y, Qi, J, Gao, F, Li, Q, Fan, Z, Yan, J, Gao, G.F.
登録日2013-03-24
公開日2013-05-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.805 Å)
主引用文献Molecular basis of the receptor binding specificity switch of the hemagglutinins from both the 1918 and 2009 pandemic influenza A viruses by a D225G substitution
J.Virol., 87, 2013
4JTV
DownloadVisualize
BU of 4jtv by Molmil
Crystal structure of 2009 pandemic influenza virus hemagglutinin complexed with human receptor analogue LSTc
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
著者Zhang, W, Shi, Y, Qi, J, Gao, F, Li, Q, Fan, Z, Yan, J, Gao, G.F.
登録日2013-03-24
公開日2013-05-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.997 Å)
主引用文献Molecular basis of the receptor binding specificity switch of the hemagglutinins from both the 1918 and 2009 pandemic influenza A viruses by a D225G substitution
J.Virol., 87, 2013
4LNR
DownloadVisualize
BU of 4lnr by Molmil
The structure of HLA-B*35:01 in complex with the peptide (RPQVPLRPMTY)
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-35 alpha chain, ...
著者Cheng, H, Shi, Y, Qi, J, Gao, G.F.
登録日2013-07-12
公開日2014-07-23
最終更新日2019-12-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Peptide-dependent conformational fluctuation determines the stability of the human leukocyte antigen class I complex.
J.Biol.Chem., 289, 2014
4LL9
DownloadVisualize
BU of 4ll9 by Molmil
Crystal structure of D3D4 domain of the LILRB1 molecule
分子名称: IODIDE ION, Leukocyte immunoglobulin-like receptor subfamily B member 1
著者Nam, G, Shi, Y, Ryu, M, Wang, Q, Song, H, Liu, J, Yan, J, Qi, J, Gao, G.F.
登録日2013-07-09
公開日2013-09-11
最終更新日2013-11-06
実験手法X-RAY DIFFRACTION (2.686 Å)
主引用文献Crystal structures of the two membrane-proximal Ig-like domains (D3D4) of LILRB1/B2: alternative models for their involvement in peptide-HLA binding
Protein Cell, 4, 2013
4LLA
DownloadVisualize
BU of 4lla by Molmil
Crystal structure of D3D4 domain of the LILRB2 molecule
分子名称: Leukocyte immunoglobulin-like receptor subfamily B member 2
著者Nam, G, Shi, Y, Ryu, M, Wang, Q, Song, H, Liu, J, Yan, J, Qi, J, Gao, G.F.
登録日2013-07-09
公開日2013-09-11
最終更新日2013-11-06
実験手法X-RAY DIFFRACTION (2.502 Å)
主引用文献Crystal structures of the two membrane-proximal Ig-like domains (D3D4) of LILRB1/B2: alternative models for their involvement in peptide-HLA binding
Protein Cell, 4, 2013
4M68
DownloadVisualize
BU of 4m68 by Molmil
Crystal structure of the mouse MLKL kinase-like domain
分子名称: GLYCEROL, Mixed lineage kinase domain-like protein
著者Xie, T, Peng, W, Yan, C, Wu, J, Shi, Y.
登録日2013-08-09
公開日2013-10-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.696 Å)
主引用文献Structural Insights into RIP3-Mediated Necroptotic Signaling
Cell Rep, 5, 2013
4JTX
DownloadVisualize
BU of 4jtx by Molmil
Crystal structure of 2009 pandemic influenza virus hemagglutinin mutant D225E
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
著者Zhang, W, Shi, Y, Qi, J, Gao, F, Li, Q, Fan, Z, Yan, J, Gao, G.F.
登録日2013-03-24
公開日2013-05-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.997 Å)
主引用文献Molecular basis of the receptor binding specificity switch of the hemagglutinins from both the 1918 and 2009 pandemic influenza A viruses by a D225G substitution
J.Virol., 87, 2013
4JUJ
DownloadVisualize
BU of 4juj by Molmil
Crystal structure of 1918 pandemic influenza virus hemagglutinin mutant D225G complexed with human receptor analogue LSTc
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Zhang, W, Shi, Y, Qi, J, Gao, F, Li, Q, Fan, Z, Yan, J, Gao, G.F.
登録日2013-03-25
公開日2013-05-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.013 Å)
主引用文献Molecular basis of the receptor binding specificity switch of the hemagglutinins from both the 1918 and 2009 pandemic influenza A viruses by a D225G substitution
J.Virol., 87, 2013
4KMP
DownloadVisualize
BU of 4kmp by Molmil
Structure of XIAP-BIR3 and inhibitor
分子名称: (2S,2'S)-N,N'-[(6,6'-difluoro-1H,1'H-2,2'-biindole-3,3'-diyl)bis{methanediyl[(2R,4S)-4-hydroxypyrrolidine-2,1-diyl][(2S)-1-oxobutane-1,2-diyl]}]bis[2-(methylamino)propanamide], E3 ubiquitin-protein ligase XIAP, ZINC ION
著者Li, X, Wang, J, Condon, S.M, Shi, Y.
登録日2013-05-08
公開日2014-05-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of XIAP-BIR3 and inhibitor
To be Published
4M66
DownloadVisualize
BU of 4m66 by Molmil
Crystal structure of the mouse RIP3 kinase domain
分子名称: Receptor-interacting serine/threonine-protein kinase 3
著者Xie, T, Peng, W, Yan, C, Wu, J, Shi, Y.
登録日2013-08-09
公開日2013-10-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Structural Insights into RIP3-Mediated Necroptotic Signaling
Cell Rep, 5, 2013
4M67
DownloadVisualize
BU of 4m67 by Molmil
Crystal structure of the human MLKL kinase-like domain
分子名称: Mixed lineage kinase domain-like protein
著者Xie, T, Peng, W, Yan, C, Wu, J, Shi, Y.
登録日2013-08-09
公開日2013-10-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Insights into RIP3-Mediated Necroptotic Signaling
Cell Rep, 5, 2013
4JUG
DownloadVisualize
BU of 4jug by Molmil
Crystal structure of 1918 pandemic influenza virus hemagglutinin mutant D225G
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Zhang, W, Shi, Y, Qi, J, Gao, F, Li, Q, Fan, Z, Yan, J, Gao, G.F.
登録日2013-03-24
公開日2013-05-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Molecular basis of the receptor binding specificity switch of the hemagglutinins from both the 1918 and 2009 pandemic influenza A viruses by a D225G substitution
J.Virol., 87, 2013
6KLH
DownloadVisualize
BU of 6klh by Molmil
Dimeric structure of Machupo virus polymerase bound to vRNA promoter
分子名称: MANGANESE (II) ION, RNA (5'-R(*GP*CP*CP*UP*AP*GP*GP*AP*UP*CP*CP*AP*CP*UP*GP*UP*GP*CP*G)-3'), RNA-directed RNA polymerase L, ...
著者Peng, R, Xu, X, Jing, J, Peng, Q, Gao, G.F, Shi, Y.
登録日2019-07-30
公開日2020-03-18
最終更新日2021-12-08
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural insight into arenavirus replication machinery.
Nature, 579, 2020
6KLD
DownloadVisualize
BU of 6kld by Molmil
Structure of apo Machupo virus polymerase
分子名称: MANGANESE (II) ION, RNA-directed RNA polymerase L, ZINC ION
著者Peng, R, Xu, X, Jing, J, Peng, Q, Gao, G.F, Shi, Y.
登録日2019-07-30
公開日2020-03-18
最終更新日2021-12-08
実験手法ELECTRON MICROSCOPY (3.58 Å)
主引用文献Structural insight into arenavirus replication machinery.
Nature, 579, 2020
6DRD
DownloadVisualize
BU of 6drd by Molmil
RNA Pol II(G)
分子名称: DNA-directed RNA polymerase II subunit GRINL1A, DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11-a, ...
著者Yu, X, Jishage, M, Shi, Y, Ganesan, S, Sali, A, Chait, B.T, Asturias, F, Roeder, R.G.
登録日2018-06-11
公開日2019-06-12
最終更新日2019-12-04
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Architecture of Pol II(G) and molecular mechanism of transcription regulation by Gdown1.
Nat. Struct. Mol. Biol., 25, 2018
6KLE
DownloadVisualize
BU of 6kle by Molmil
Monomeric structure of Machupo virus polymerase bound to vRNA promoter
分子名称: MANGANESE (II) ION, RNA (5'-R(*GP*CP*CP*UP*AP*GP*GP*AP*UP*CP*CP*AP*CP*UP*GP*UP*GP*CP*G)-3'), RNA-directed RNA polymerase L, ...
著者Peng, R, Xu, X, Jing, J, Peng, Q, Gao, G.F, Shi, Y.
登録日2019-07-30
公開日2020-03-18
最終更新日2021-12-08
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structural insight into arenavirus replication machinery.
Nature, 579, 2020
4KMN
DownloadVisualize
BU of 4kmn by Molmil
Structure of cIAP1-BIR3 and inhibitor
分子名称: (2S)-N-{(2R)-1-[(2R,4S)-2-{[6,6'-difluoro-3'-({(2R,4S)-4-hydroxy-1-[(2S)-2-{[(2S)-2-(methylamino)propanoyl]amino}butanoyl]pyrrolidin-2-yl}methyl)-1H,1'H-2,2'-biindol-3-yl]methyl}-4-hydroxypyrrolidin-1-yl]-1-oxobutan-2-yl}-2-(methylamino)propanamide, Baculoviral IAP repeat-containing protein 2, PHOSPHATE ION, ...
著者Li, X, Wang, J, Condon, S.M, Shi, Y.
登録日2013-05-08
公開日2014-05-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.523 Å)
主引用文献Structure of cIAP1-BIR3 and inhibitor
To be Published
4M69
DownloadVisualize
BU of 4m69 by Molmil
Crystal structure of the mouse RIP3-MLKL complex
分子名称: CHLORIDE ION, MAGNESIUM ION, Mixed lineage kinase domain-like protein, ...
著者Xie, T, Peng, W, Yan, C, Wu, J, Shi, Y.
登録日2013-08-09
公開日2013-10-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.497 Å)
主引用文献Structural Insights into RIP3-Mediated Necroptotic Signaling
Cell Rep, 5, 2013
5X4S
DownloadVisualize
BU of 5x4s by Molmil
Structure of the N-terminal domain (NTD)of SARS-CoV spike protein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Yuan, Y, Zhang, Y, Qi, J, Shi, Y, Gao, G.F.
登録日2017-02-14
公開日2017-05-03
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Cryo-EM structures of MERS-CoV and SARS-CoV spike glycoproteins reveal the dynamic receptor binding domains
Nat Commun, 8, 2017
3SIQ
DownloadVisualize
BU of 3siq by Molmil
Crystal Structure of autoinhibited dIAP1-BIR1 domain
分子名称: Apoptosis 1 inhibitor, ZINC ION
著者Li, X, Wang, J, Shi, Y.
登録日2011-06-20
公開日2011-08-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural mechanisms of DIAP1 auto-inhibition and DIAP1-mediated inhibition of drICE.
Nat Commun, 2, 2011
3SIR
DownloadVisualize
BU of 3sir by Molmil
Crystal Structure of drICE
分子名称: Caspase
著者Li, X, Wang, J, Shi, Y.
登録日2011-06-20
公開日2011-08-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Structural mechanisms of DIAP1 auto-inhibition and DIAP1-mediated inhibition of drICE.
Nat Commun, 2, 2011
3SIP
DownloadVisualize
BU of 3sip by Molmil
Crystal structure of drICE and dIAP1-BIR1 complex
分子名称: Apoptosis 1 inhibitor, Caspase, ZINC ION
著者Li, X, Wang, J, Shi, Y.
登録日2011-06-20
公開日2011-08-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.496 Å)
主引用文献Structural mechanisms of DIAP1 auto-inhibition and DIAP1-mediated inhibition of drICE.
Nat Commun, 2, 2011
3T7K
DownloadVisualize
BU of 3t7k by Molmil
Complex structure of Rtt107p and phosphorylated histone H2A
分子名称: Histone H2A.1, Regulator of Ty1 transposition protein 107
著者Li, X, Li, F, Wu, J, Shi, Y.
登録日2011-07-30
公開日2012-02-15
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.028 Å)
主引用文献Structure of C-terminal Tandem BRCT Repeats of Rtt107 Protein Reveals Critical Role in Interaction with Phosphorylated Histone H2A during DNA Damage Repair
J.Biol.Chem., 287, 2012
6KL9
DownloadVisualize
BU of 6kl9 by Molmil
Structure of LbCas12a-crRNA complex bound to AcrVA4 (form A complex)
分子名称: AcrVA4, LbCas12a, MAGNESIUM ION, ...
著者Peng, R, Li, Z, Xu, Y, He, S, Peng, Q, Shi, Y, Gao, G.F.
登録日2019-07-30
公開日2019-09-11
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Structural insight into multistage inhibition of CRISPR-Cas12a by AcrVA4.
Proc.Natl.Acad.Sci.USA, 116, 2019

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon