Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2HSD
DownloadVisualize
BU of 2hsd by Molmil
THE REFINED THREE-DIMENSIONAL STRUCTURE OF 3ALPHA,20BETA-HYDROXYSTEROID DEHYDROGENASE AND POSSIBLE ROLES OF THE RESIDUES CONSERVED IN SHORT-CHAIN DEHYDROGENASES
分子名称: 3-ALPHA, 20 BETA-HYDROXYSTEROID DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Ghosh, D, Duax, W.L.
登録日1994-03-28
公開日1994-08-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献The refined three-dimensional structure of 3 alpha,20 beta-hydroxysteroid dehydrogenase and possible roles of the residues conserved in short-chain dehydrogenases.
Structure, 2, 1994
2HQT
DownloadVisualize
BU of 2hqt by Molmil
Crystal structures of the interacting domains from yeast glutamyl-tRNA synthetase and tRNA aminoacylation and nuclear export cofactor Arc1p reveal a novel function for an old fold
分子名称: GU4 nucleic-binding protein 1, SULFATE ION
著者Simader, H, Hothorn, M, Suck, D.
登録日2006-07-19
公開日2006-09-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of the interacting domains from yeast glutamyl-tRNA synthetase and tRNA-aminoacylation and nuclear-export cofactor Arc1p reveal a novel function for an old fold.
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
5MSD
DownloadVisualize
BU of 5msd by Molmil
Structure of the A domain of carboxylic acid reductase (CAR) from Nocardia iowensis in complex with AMP and benzoic acid
分子名称: ADENOSINE MONOPHOSPHATE, BENZOIC ACID, Carboxylic acid reductase
著者Dunstan, M.S, Leys, D.
登録日2017-01-04
公開日2017-07-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Structures of carboxylic acid reductase reveal domain dynamics underlying catalysis.
Nat. Chem. Biol., 13, 2017
6LT0
DownloadVisualize
BU of 6lt0 by Molmil
cryo-EM structure of C9ORF72-SMCR8-WDR41
分子名称: Guanine nucleotide exchange C9orf72, Guanine nucleotide exchange protein SMCR8, WD repeat-containing protein 41
著者Tang, D, Sheng, J, Xu, L, Zhan, X, Yan, C, Qi, S.
登録日2020-01-21
公開日2020-04-15
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structure of C9ORF72-SMCR8-WDR41 reveals the role as a GAP for Rab8a and Rab11a.
Proc.Natl.Acad.Sci.USA, 117, 2020
8FE5
DownloadVisualize
BU of 8fe5 by Molmil
Structure of J-PKAc chimera complexed with Aplithianine B
分子名称: 6-[(6P)-6-(1-methyl-1H-imidazol-5-yl)-2,3-dihydro-4H-1,4-thiazin-4-yl]-7,9-dihydro-8H-purin-8-one, DnaJ homolog subfamily B member 1,cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase inhibitor alpha
著者Du, L, Wilson, B.A.P, Li, N, Martinez Fiesco, J.A, Dalilian, M, Wang, D, Smith, E.A, Wamiru, A, Goncharova, E.I, Zhang, P, O'Keefe, B.R.
登録日2022-12-05
公開日2023-10-18
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Discovery and Synthesis of a Naturally Derived Protein Kinase Inhibitor that Selectively Inhibits Distinct Classes of Serine/Threonine Kinases.
J.Nat.Prod., 86, 2023
6LTV
DownloadVisualize
BU of 6ltv by Molmil
Crystal Structure of I122A/I330A variant of S-adenosylmethionine synthetase from Cryptosporidium hominis in complex with ONB-SAM (2-nitro benzyme S-adenosyl-methionine)
分子名称: MAGNESIUM ION, S-adenosylmethionine synthase, TRIPHOSPHATE, ...
著者Singh, R.K, Michailidou, F, Rentmeister, A, Kuemmel, D.
登録日2020-01-23
公開日2020-10-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Engineered SAM Synthetases for Enzymatic Generation of AdoMet Analogs with Photocaging Groups and Reversible DNA Modification in Cascade Reactions.
Angew.Chem.Int.Ed.Engl., 60, 2021
5MSC
DownloadVisualize
BU of 5msc by Molmil
Structure of the A domain of carboxylic acid reductase (CAR) from Nocardia iowensis in complex with AMP
分子名称: ADENOSINE MONOPHOSPHATE, Carboxylic acid reductase
著者Dunstan, M.S, Leys, D.
登録日2017-01-04
公開日2017-07-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structures of carboxylic acid reductase reveal domain dynamics underlying catalysis.
Nat. Chem. Biol., 13, 2017
6LM3
DownloadVisualize
BU of 6lm3 by Molmil
Neutralization mechanism of a monoclonal antibody targeting a porcine circovirus type 2 Cap protein conformational epitope
分子名称: Capsid protein
著者Sun, Z, Huang, L, Xia, D, Wei, Y, Sun, E, Zhu, H, Bian, H, Wu, H, Feng, L, Wang, J, Liu, C.
登録日2019-12-24
公開日2020-02-12
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (6.7 Å)
主引用文献Neutralization Mechanism of a Monoclonal Antibody Targeting a Porcine Circovirus Type 2 Cap Protein Conformational Epitope.
J.Virol., 94, 2020
5MWA
DownloadVisualize
BU of 5mwa by Molmil
human sEH Phosphatase in complex with 3-4-3,4-dichlorophenyl-5-phenyl-1,3-oxazol-2-yl-benzoic-acid
分子名称: 3-[4-(3,4-dichlorophenyl)-5-phenyl-1,3-oxazol-2-yl]benzoic acid, Bifunctional epoxide hydrolase 2, MAGNESIUM ION
著者Kramer, J.S, Pogoryelov, D, Sorrell, F.J, Fox, N, Chaikuad, A, Knapp, S, Proschak, E.
登録日2017-01-18
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Discovery of first in vivo active inhibitors of soluble epoxide hydrolase (sEH) phosphatase domain.
J.Med.Chem., 2019
1I8F
DownloadVisualize
BU of 1i8f by Molmil
THE CRYSTAL STRUCTURE OF A HEPTAMERIC ARCHAEAL SM PROTEIN: IMPLICATIONS FOR THE EUKARYOTIC SNRNP CORE
分子名称: GLYCEROL, PUTATIVE SNRNP SM-LIKE PROTEIN
著者Mura, C, Cascio, D, Sawaya, M.R, Eisenberg, D.
登録日2001-03-14
公開日2001-05-16
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The crystal structure of a heptameric archaeal Sm protein: Implications for the eukaryotic snRNP core.
Proc.Natl.Acad.Sci.USA, 98, 2001
6M9I
DownloadVisualize
BU of 6m9i by Molmil
L-GSTSTA from degenerate octameric repeats in InaZ, residues 707-712
分子名称: Ice nucleation protein
著者Zee, C, Glynn, C, Gallagher-Jones, M, Miao, J, Santiago, C.G, Cascio, D, Gonen, T, Sawaya, M.R, Rodriguez, J.A.
登録日2018-08-23
公開日2019-03-27
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (0.9 Å)
主引用文献Homochiral and racemic MicroED structures of a peptide repeat from the ice-nucleation protein InaZ.
IUCrJ, 6, 2019
5MSQ
DownloadVisualize
BU of 5msq by Molmil
Structure of the A domain of carboxylic acid reductase (CAR) from Nocardia iowensis in complex with AMP and iodide
分子名称: ADENOSINE MONOPHOSPHATE, Carboxylic acid reductase, IODIDE ION
著者Dunstan, M.S, Leys, D.
登録日2017-01-05
公開日2018-01-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structure and mechanism of carboxylic acid reductase
To be published
6X4H
DownloadVisualize
BU of 6x4h by Molmil
Sortilin-Progranulin Interaction With Compound 24
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-methyl-N-(6-phenoxypyridine-3-carbonyl)-L-leucine, GLYCEROL, ...
著者Parthasarathy, G, Soisson, S.M, Klein, D.
登録日2020-05-22
公開日2020-08-12
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Identification of potent inhibitors of the sortilin-progranulin interaction.
Bioorg.Med.Chem.Lett., 30, 2020
5MQX
DownloadVisualize
BU of 5mqx by Molmil
NMR solution structure of macro domain from Venezuelan equine encephalitis virus(VEEV) in complex with ADP-ribose
分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Non-structural protein3
著者Makrynitsa, G.I, Ntonti, D, Marousis, K.D, Matsoukas, M.T, Papageorgiou, N, Coutard, B, Bentrop, D, Spyroulias, G.A.
登録日2016-12-21
公開日2018-07-04
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Conformational plasticity of the VEEV macro domain is important for binding of ADP-ribose.
J.Struct.Biol., 206, 2019
2Z9T
DownloadVisualize
BU of 2z9t by Molmil
Crystal structure of the human beta-2 microglobulin mutant W60G
分子名称: Beta-2-microglobulin
著者Ricagno, S, Bolognesi, M, Bellotti, V, Corazza, A, Rennella, E, Gural, D, Mimmi, M.C, Betto, E, Pucillo, C, Fogolari, F, Viglino, P, Raimondi, S, Giorgetti, S, Bolognesi, B, Merlini, G, Stoppini, M.
登録日2007-09-26
公開日2008-04-22
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The controlling roles of Trp60 and Trp95 in beta2-microglobulin function, folding and amyloid aggregation properties
J.Mol.Biol., 378, 2008
8F47
DownloadVisualize
BU of 8f47 by Molmil
Crystal structure of VACV D13 in complex with STK69439
分子名称: 6,8-dimethoxy-2-methylquinolin-4-amine, FORMIC ACID, Scaffold protein D13
著者Subedi, B.P, Garriga, D, Coulibaly, F.
登録日2022-11-10
公開日2023-12-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of scaffolidng protein D13 of Vaccinia Virus in complex with fragments inhibiting A17 binding.
To Be Published
1J2L
DownloadVisualize
BU of 1j2l by Molmil
Crystal structure of the disintegrin, trimestatin
分子名称: Disintegrin triflavin, SULFATE ION
著者Fujii, Y, Okuda, D, Fujimoto, Z, Morita, T, Mizuno, H.
登録日2003-01-06
公開日2003-10-07
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of Trimestatin, a Disintegrin Containing a Cell Adhesion Recognition Motif RGD
J.Mol.Biol., 332, 2003
8F65
DownloadVisualize
BU of 8f65 by Molmil
Crystal structure of VACV D13 in complex with BBL030900
分子名称: 8-methoxyquinolin-4-amine, FORMIC ACID, Scaffold protein D13
著者Subedi, B.P, Garriga, D, Coulibaly, F.
登録日2022-11-16
公開日2023-12-13
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structure of scaffolidng protein D13 of Vaccinia Virus in complex with fragments inhibiting A17 binding.
To Be Published
8FCG
DownloadVisualize
BU of 8fcg by Molmil
Cryo-EM structure of Chikungunya virus asymmetric unit
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Capsid protein, E1 glycoprotein, ...
著者Su, G.C, Chmielewsk, D, Kaelber, J, Pintilie, G, Chen, M, Jin, J, Auguste, A, Chiu, W.
登録日2022-12-01
公開日2024-03-20
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Cryogenic electron microscopy and tomography reveal imperfect icosahedral symmetry in alphaviruses.
Pnas Nexus, 3, 2024
3UAG
DownloadVisualize
BU of 3uag by Molmil
UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, ...
著者Bertrand, J.A, Auger, G, Martin, L, Fanchon, E, Blanot, D, Le Beller, D, Van Heijenoort, J, Dideberg, O.
登録日1999-02-24
公開日2000-02-25
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Determination of the MurD mechanism through crystallographic analysis of enzyme complexes.
J.Mol.Biol., 289, 1999
4MB9
DownloadVisualize
BU of 4mb9 by Molmil
Structure of Streptococcus pneumonia ParE in complex with AZ13102335
分子名称: 1-ethyl-3-{6-(pyrimidin-5-yl)-5-[(3R)-tetrahydrofuran-3-ylmethoxy][1,3]thiazolo[5,4-b]pyridin-2-yl}urea, DNA topoisomerase IV, B subunit, ...
著者Ogg, D, Tucker, J.
登録日2013-08-19
公開日2013-10-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Thiazolopyridine Ureas as Novel Antitubercular Agents Acting through Inhibition of DNA Gyrase B.
J.Med.Chem., 56, 2013
4MBC
DownloadVisualize
BU of 4mbc by Molmil
Structure of Streptococcus pneumonia ParE in complex with AZ13053807
分子名称: 1-{5-[2-(morpholin-4-yl)ethoxy]-6-(pyridin-3-yl)[1,3]thiazolo[5,4-b]pyridin-2-yl}-3-prop-2-en-1-ylurea, DNA topoisomerase IV, B subunit
著者Ogg, D, Tucker, J.
登録日2013-08-19
公開日2013-10-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Thiazolopyridine Ureas as Novel Antitubercular Agents Acting through Inhibition of DNA Gyrase B.
J.Med.Chem., 56, 2013
1HE7
DownloadVisualize
BU of 1he7 by Molmil
Human Nerve growth factor receptor TrkA
分子名称: GLYCEROL, HIGH AFFINITY NERVE GROWTH FACTOR RECEPTOR
著者Banfield, M, Robertson, A, Allen, S, Dando, J, Tyler, S, Bennett, G, Brain, S, Mason, G, Holden, P, Clarke, A, Naylor, R, Wilcock, G, Brady, R, Dawbarn, D.
登録日2000-11-20
公開日2001-04-02
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Identification and Structure of the Nerve Growth Factor Binding Site on Trka.
Biochem.Biophys.Res.Commun., 282, 2001
6M9J
DownloadVisualize
BU of 6m9j by Molmil
Racemic-GSTSTA from degenerate octameric repeats in InaZ, residues 707-712
分子名称: Ice nucleation protein
著者Zee, C, Glynn, C, Gallagher-Jones, M, Miao, J, Santiago, C.G, Cascio, D, Gonen, T, Sawaya, M.R, Rodriguez, J.A.
登録日2018-08-23
公開日2019-03-27
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (0.9 Å)
主引用文献Homochiral and racemic MicroED structures of a peptide repeat from the ice-nucleation protein InaZ.
IUCrJ, 6, 2019
4MJH
DownloadVisualize
BU of 4mjh by Molmil
Human Hsp27 core domain in complex with C-terminal peptide
分子名称: Heat shock protein beta-1
著者Laganowsky, A, Cascio, D, Sawaya, M.R, Eisenberg, D.
登録日2013-09-03
公開日2014-04-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.599 Å)
主引用文献The structured core domain of alpha B-crystallin can prevent amyloid fibrillation and associated toxicity.
Proc.Natl.Acad.Sci.USA, 111, 2014

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon