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cryo-EM structure of Omicron BA.5 S protein in complex with XGv282
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者	Xia, X.Y, Zhang, Y.Y, Chi, X.M, Huang, B.D, Wu, L.S, Zhou, Q.
登録日	2022-09-08
公開日	2023-07-12
実験手法	ELECTRON MICROSCOPY (3.2 Å)
主引用文献	Comprehensive structural analysis reveals broad-spectrum neutralizing antibodies against SARS-CoV-2 Omicron variants. Cell Discov, 9, 2023

8GTQ

cryo-EM structure of Omicron BA.5 S protein in complex with S2L20
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者	Xia, X.Y, Zhang, Y.Y, Chi, X.M, Huang, B.D, Wu, L.S, Zhou, Q.
登録日	2022-09-08
公開日	2023-07-12
実験手法	ELECTRON MICROSCOPY (3.1 Å)
主引用文献	Comprehensive structural analysis reveals broad-spectrum neutralizing antibodies against SARS-CoV-2 Omicron variants. Cell Discov, 9, 2023

7X4I

Crystal structure of nanobody aSA3 in complex with dimer SARS-CoV-1 RBD
分子名称:	Spike glycoprotein, nanobody aSA3
著者	Ma, H, Zeng, W.H, Jin, T.C.
登録日	2022-03-02
公開日	2023-01-11
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (3.38 Å)
主引用文献	A bispecific nanobody dimer broadly neutralizes SARS-CoV-1 & 2 variants of concern and offers substantial protection against Omicron via low-dose intranasal administration. Cell Discov, 8, 2022

8HLW

Crystal structure of SIRT3 in complex with H4K16la peptide
分子名称:	(2S)-2-HYDROXYPROPANOIC ACID, Histone H4 residues 20-27, NAD-dependent protein deacetylase sirtuin-3, ...
著者	Zhuming, F, Hao, Q.
登録日	2022-12-01
公開日	2023-09-27
最終更新日	2023-11-15
実験手法	X-RAY DIFFRACTION (2.5 Å)
主引用文献	Identification of SIRT3 as an eraser of H4K16la. Iscience, 26, 2023

8HLY

Crystal structure of SIRT3 in complex with H3K23la peptide
分子名称:	(2S)-2-HYDROXYPROPANOIC ACID, 1,2-ETHANEDIOL, GLYCEROL, ...
著者	Zhuming, F, Hao, Q.
登録日	2022-12-01
公開日	2023-09-27
最終更新日	2023-11-15
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Identification of SIRT3 as an eraser of H4K16la. Iscience, 26, 2023

8H3V

Cryo-EM structure of the full transcription activation complex NtcA-NtcB-TAC
分子名称:	DNA (125-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者	Han, S.J, Jiang, Y.L, You, L.L, Shen, L.Q, Wu, X.X, Yang, F, Kong, W.W, Chen, Z.P, Zhang, Y, Zhou, C.Z.
登録日	2022-10-09
公開日	2023-10-04
最終更新日	2024-02-28
実験手法	ELECTRON MICROSCOPY (4.5 Å)
主引用文献	DNA looping mediates cooperative transcription activation. Nat.Struct.Mol.Biol., 31, 2024

8H40

Cryo-EM structure of the transcription activation complex NtcA-TAC
分子名称:	DNA (125-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者	Han, S.J, Jiang, Y.L, You, L.L, Shen, L.Q, Wu, X.X, Yang, F, Kong, W.W, Chen, Z.P, Zhang, Y, Zhou, C.Z.
登録日	2022-10-09
公開日	2023-10-04
最終更新日	2024-02-28
実験手法	ELECTRON MICROSCOPY (3.6 Å)
主引用文献	DNA looping mediates cooperative transcription activation. Nat.Struct.Mol.Biol., 31, 2024

8H3Z

Crystal structure of the effector-binding domain of the LysR-type trasncription factor NtcB from Anabaena PCC 7120
分子名称:	IODIDE ION, NtcB
著者	Han, S.J, Jiang, Y.L, Zhou, C.Z.
登録日	2022-10-09
公開日	2023-10-04
最終更新日	2024-02-28
実験手法	X-RAY DIFFRACTION (2.35 Å)
主引用文献	DNA looping mediates cooperative transcription activation. Nat.Struct.Mol.Biol., 31, 2024

7DQ1

Cryo-EM structure of Coxsackievirus B1 virion in complex with CAR at physiological temperature
分子名称:	Capsid protein VP4, Coxsackievirus and adenovirus receptor, VP2, ...
著者	Li, S, Zhu, R, Xu, L, Cheng, T, Zheng, Q.
登録日	2020-12-22
公開日	2021-05-05
実験手法	ELECTRON MICROSCOPY (3.6 Å)
主引用文献	Cryo-EM structures reveal the molecular basis of receptor-initiated coxsackievirus uncoating. Cell Host Microbe, 29, 2021

7EAN

immune complex of SARS-CoV-2 RBD and cross-neutralizing antibody 6D6
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of SARS-CoV-2 cross-neutralizing mAb 6D6, Light chain of SARS-CoV-2 cross-neutralizing mAb 6D6, ...
著者	Li, T.T, Gu, Y, Li, S.W.
登録日	2021-03-07
公開日	2021-03-31
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.91 Å)
主引用文献	Cross-neutralizing antibodies bind a SARS-CoV-2 cryptic site and resist circulating variants. Nat Commun, 12, 2021

7DPF

Cryo-EM structure of Coxsackievirus B1 mature virion
分子名称:	Capsid protein VP4, PALMITIC ACID, VP2, ...
著者	Zheng, Q, Li, S.
登録日	2020-12-18
公開日	2021-05-05
最終更新日	2024-03-27
実験手法	ELECTRON MICROSCOPY (3.2 Å)
主引用文献	Cryo-EM structures reveal the molecular basis of receptor-initiated coxsackievirus uncoating. Cell Host Microbe, 29, 2021

7DQ7

Cryo-EM structure of Coxsackievirus B1 mature virion in complex with nAb 5F5
分子名称:	5F5 VH, 5F5 VL, Capsid protein VP4, ...
著者	Li, S, Zhu, R, Xu, L, Cheng, T, Zheng, Q.
登録日	2020-12-22
公開日	2021-05-05
実験手法	ELECTRON MICROSCOPY (3.2 Å)
主引用文献	Cryo-EM structures reveal the molecular basis of receptor-initiated coxsackievirus uncoating. Cell Host Microbe, 29, 2021

7DQ4

Cryo-EM structure of CAR triggered Coxsackievirus B1 A-particle
分子名称:	VP2, VP3, Virion protein 1
著者	Li, S, Zhu, R, Xu, L, Cheng, T, Zheng, Q.
登録日	2020-12-22
公開日	2021-05-05
最終更新日	2024-03-27
実験手法	ELECTRON MICROSCOPY (3.8 Å)
主引用文献	Cryo-EM structures reveal the molecular basis of receptor-initiated coxsackievirus uncoating. Cell Host Microbe, 29, 2021

7DPG

Cryo-EM structure of Coxsackievirus B1 empty particle
分子名称:	VP2, VP3, Virion protein 1
著者	Li, S, Zhu, R, Xu, L, Cheng, T, Zheng, Q, Xia, N.
登録日	2020-12-18
公開日	2021-05-05
最終更新日	2024-03-27
実験手法	ELECTRON MICROSCOPY (3.4 Å)
主引用文献	Cryo-EM structures reveal the molecular basis of receptor-initiated coxsackievirus uncoating. Cell Host Microbe, 29, 2021

7DPZ

Cryo-EM structure of Coxsackievirus B1 virion in complex with CAR
分子名称:	Capsid protein VP4, Coxsackievirus and adenovirus receptor, VP2, ...
著者	Li, S, Zhu, R, Xu, L, Cheng, T, Zheng, Q.
登録日	2020-12-22
公開日	2021-05-05
実験手法	ELECTRON MICROSCOPY (3.8 Å)
主引用文献	Cryo-EM structures reveal the molecular basis of receptor-initiated coxsackievirus uncoating. Cell Host Microbe, 29, 2021

7EAM

immune complex of SARS-CoV-2 RBD and cross-neutralizing antibody 7D6
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, ...
著者	Li, T.T, Gu, Y, Li, S.W.
登録日	2021-03-07
公開日	2021-03-17
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.4 Å)
主引用文献	Cross-neutralizing antibodies bind a SARS-CoV-2 cryptic site and resist circulating variants. Nat Commun, 12, 2021

7E5W

The structure of CcpA from Staphylococcus aureus
分子名称:	Catabolite control protein A, SULFATE ION
著者	Yu, G, Wei, X.
登録日	2021-02-20
公開日	2021-07-14
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (2.55 Å)
主引用文献	Regulation of DNA-binding activity of the Staphylococcus aureus catabolite control protein A by copper (II)-mediated oxidation. J.Biol.Chem., 298, 2022

7DHJ

The co-crystal structure of SARS-CoV-2 main protease with the peptidomimetic inhibitor (S)-2-cinnamamido-N-((S)-1-oxo-3-((S)-2-oxopyrrolidin-3-yl)propan-2-yl)pent-4-ynamide
分子名称:	(2~{S})-~{N}-[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-2-[[(~{E})-3-phenylprop-2-enoyl]amino]pent-4-ynamide, 3C-like proteinase
著者	Shang, L.Q, Wang, H, Deng, W.L, Xing, S, Wang, Y.X.
登録日	2020-11-15
公開日	2021-11-24
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.962 Å)
主引用文献	The structure-based design of peptidomimetic inhibitors against SARS-CoV-2 3C like protease as Potent anti-viral drug candidate. Eur.J.Med.Chem., 238, 2022

7DGB

The co-crystal structure of SARS-CoV-2 main protease with (S)-2-cinnamamido-4-methyl-N-((S)-1-oxo-3-((S)-2-oxopyrrolidin-3-yl)propan-2-yl)pentanamide
分子名称:	(2~{S})-4-methyl-~{N}-[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-2-[[(~{E})-3-phenylprop-2-enoyl]amino]pentanamide, 3C-like proteinase
著者	Shang, L.Q, Wang, H.
登録日	2020-11-11
公開日	2021-11-24
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.678 Å)
主引用文献	The structure-based design of peptidomimetic inhibitors against SARS-CoV-2 3C like protease as Potent anti-viral drug candidate. Eur.J.Med.Chem., 238, 2022

7DGH

The co-crystal structure of SARS-CoV-2 main protease with peptidomimetic inhibitor N-((S)-3-methyl-1-(((S)-4-methyl-1-oxo-1-(((S)-1-oxo-3-((S)-2-oxopiperidin-3-yl)propan-2-yl)amino)pentan-2-yl)amino)-1-oxobutan-2-yl)-2-naphthamide
分子名称:	3C-like proteinase, ~{N}-[(2~{S})-3-methyl-1-[[(2~{S})-4-methyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepiperidin-3-yl]propan-2-yl]amino]pentan-2-yl]amino]-1-oxidanylidene-butan-2-yl]naphthalene-2-carboxamide
著者	Shang, L.Q, Wang, H.
登録日	2020-11-11
公開日	2021-11-24
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.968 Å)
主引用文献	The structure-based design of peptidomimetic inhibitors against SARS-CoV-2 3C like protease as Potent anti-viral drug candidate. Eur.J.Med.Chem., 238, 2022

7DGF

The co-crystal structure of SARS-CoV-2 main protease with peptidomimetic inhibitor (S)-2-cinnamamido-N-((S)-1-oxo-3-((S)-2-oxopiperidin-3-yl)propan-2-yl)hexanamide
分子名称:	(2~{S})-~{N}-[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepiperidin-3-yl]propan-2-yl]-2-[[(~{E})-3-phenylprop-2-enoyl]amino]hexanamide, 3C-like proteinase
著者	Shang, L.Q, Wang, H.
登録日	2020-11-11
公開日	2021-11-24
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.639 Å)
主引用文献	The structure-based design of peptidomimetic inhibitors against SARS-CoV-2 3C like protease as Potent anti-viral drug candidate. Eur.J.Med.Chem., 238, 2022

7DGG

The co-crystal structure of SARS-CoV-2 main protease with (S)-2-cinnamamido-N-((S)-1-oxo-3-((S)-2-oxopyrrolidin-3-yl)propan-2-yl)hexanamide
分子名称:	(2~{S})-~{N}-[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-2-[[(~{E})-3-phenylprop-2-enoyl]amino]hexanamide, 3C-like proteinase
著者	Shang, L.Q, Wang, H.
登録日	2020-11-11
公開日	2021-11-24
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (2.004 Å)
主引用文献	The structure-based design of peptidomimetic inhibitors against SARS-CoV-2 3C like protease as Potent anti-viral drug candidate. Eur.J.Med.Chem., 238, 2022

7DGI

The co-crystal structure of SARS-CoV-2 main protease with peptidomimetic inhibitor N-((S)-3-methyl-1-(((S)-4-methyl-1-oxo-1-(((S)-1-oxo-3-((S)-2-oxopiperidin-3-yl)propan-2-yl)amino)pentan-2-yl)amino)-1-oxobutan-2-yl)-4-nitrobenzamide
分子名称:	3C-like proteinase, ~{N}-[(2~{S})-3-methyl-1-[[(2~{S})-4-methyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepiperidin-3-yl]propan-2-yl]amino]pentan-2-yl]amino]-1-oxidanylidene-butan-2-yl]-4-nitro-benzamide
著者	Shang, L.Q, Wang, H.
登録日	2020-11-11
公開日	2021-11-24
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.898 Å)
主引用文献	The structure-based design of peptidomimetic inhibitors against SARS-CoV-2 3C like protease as Potent anti-viral drug candidate. Eur.J.Med.Chem., 238, 2022

7XE4

structure of a membrane-bound glycosyltransferase
分子名称:	(11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate, 1,3-beta-glucan synthase component FKS1, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者	Hu, X.L, Yang, P, Zhang, M, Liu, X.T, Yu, H.J.
登録日	2022-03-29
公開日	2023-03-29
最終更新日	2023-04-19
実験手法	ELECTRON MICROSCOPY (3.4 Å)
主引用文献	Structural and mechanistic insights into fungal beta-1,3-glucan synthase FKS1. Nature, 616, 2023

7YUY

Structure of a mutated membrane-bound glycosyltransferase
分子名称:	(11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate, 1,3-beta-glucan synthase component FKS1, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者	Hu, X.L, Yang, P, Zhang, M, Liu, X.T, Yu, H.J.
登録日	2022-08-18
公開日	2023-03-29
最終更新日	2023-04-19
実験手法	ELECTRON MICROSCOPY (3.5 Å)
主引用文献	Structural and mechanistic insights into fungal beta-1,3-glucan synthase FKS1. Nature, 616, 2023

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