2RRC
 
 | | Solution Structure of RNA aptamer against AML1 Runt domain | | 分子名称: | 5'-R(P*GP*GP*AP*CP*CP*CP*(AP7)P*CP*CP*AP*CP*GP*GP*CP*GP*AP*GP*GP*UP*CP*CP*A)-3' | | 著者 | Nomura, Y, Fujiwara, K, Chiba, M, Fukunaga, J, Tanaka, Y, Iibuchi, H, Tanaka, T, Nakamura, Y, Kawai, G, Kozu, T, Sakamoto, T. | | 登録日 | 2010-06-23 | | 公開日 | 2011-06-29 | | 最終更新日 | 2024-05-01 | | 実験手法 | SOLUTION NMR | | 主引用文献 | A novel high affinity RNA motif that mimics DNA in AML1 Runt domain binding
To be Published
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1WMO
 | | Crystal structure of topaquinone-containing amine oxidase activated by nickel ion | | 分子名称: | NICKEL (II) ION, Phenylethylamine oxidase | | 著者 | Okajima, T, Kishishita, S, Chiu, Y.C, Murakawa, T, Kim, M, Yamaguchi, H, Hirota, S, Kuroda, S, Tanizawa, K. | | 登録日 | 2004-07-13 | | 公開日 | 2005-08-02 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Reinvestigation of metal ion specificity for quinone cofactor biogenesis in bacterial copper amine oxidase
Biochemistry, 44, 2005
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1WMP
 | | Crystal structure of amine oxidase complexed with cobalt ion | | 分子名称: | COBALT (II) ION, Phenylethylamine oxidase | | 著者 | Okajima, T, Kishishita, S, Chiu, Y.C, Murakawa, T, Kim, M, Yamaguchi, H, Hirota, S, Kuroda, S, Tanizawa, K. | | 登録日 | 2004-07-13 | | 公開日 | 2005-08-02 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Reinvestigation of metal ion specificity for quinone cofactor biogenesis in bacterial copper amine oxidase
Biochemistry, 44, 2005
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5GZK
 | | Endo-beta-1,2-glucanase from Chitinophaga pinensis - sophorotriose and glucose complex | | 分子名称: | CHLORIDE ION, DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, ... | | 著者 | Abe, K, Nakajima, M, Arakawa, T, Fushinobu, S, Taguchi, H. | | 登録日 | 2016-09-28 | | 公開日 | 2017-03-15 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | Biochemical and structural analyses of a bacterial endo-beta-1,2-glucanase reveal a new glycoside hydrolase family
J. Biol. Chem., 292, 2017
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5GZH
 | | Endo-beta-1,2-glucanase from Chitinophaga pinensis - ligand free form | | 分子名称: | Endo-beta-1,2-glucanase, IODIDE ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose | | 著者 | Abe, K, Nakajima, M, Arakawa, T, Fushinobu, S, Taguchi, H. | | 登録日 | 2016-09-28 | | 公開日 | 2017-03-15 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Biochemical and structural analyses of a bacterial endo-beta-1,2-glucanase reveal a new glycoside hydrolase family
J. Biol. Chem., 292, 2017
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2CZY
 | | Solution structure of the NRSF/REST-mSin3B PAH1 complex | | 分子名称: | Paired amphipathic helix protein Sin3b, transcription factor REST (version 3) | | 著者 | Nomura, M, Uda-Tochio, H, Murai, K, Mori, N, Nishimura, Y. | | 登録日 | 2005-07-20 | | 公開日 | 2005-12-20 | | 最終更新日 | 2024-05-29 | | 実験手法 | SOLUTION NMR | | 主引用文献 | The Neural Repressor NRSF/REST Binds the PAH1 Domain of the Sin3 Corepressor by Using its Distinct Short Hydrophobic Helix
J.Mol.Biol., 354, 2005
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3VJT
 | | Vitamin D receptor complex with a carborane compound | | 分子名称: | 1-(2-[(R)-2,4-Dihydroxybutoxy]ethyl)-12-(5-ethyl-5-hydroxyheptyl)-1,12-dicarba-closo-dodecaborane, Vitamin D3 receptor, peptide from Mediator of RNA polymerase II transcription subunit 1 | | 著者 | Fujii, S, Masuno, M, Kagechika, H, Nakabayashi, M, Ito, N. | | 登録日 | 2011-10-31 | | 公開日 | 2012-02-08 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Boron Cluster-based Development of Potent Nonsecosteroidal Vitamin D Receptor Ligands: Direct Observation of Hydrophobic Interaction between Protein Surface and Carborane
J.Am.Chem.Soc., 133, 2011
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3VJS
 | | Vitamin D receptor complex with a carborane compound | | 分子名称: | 1-(2-[(S)-2,4-Dihydroxybutoxy]ethyl)-12-(5-ethyl-5-hydroxyheptyl)-1,12-dicarba-closo-dodecaborane, Vitamin D3 receptor, peptide from Mediator of RNA polymerase II transcription subunit 1 | | 著者 | Fujii, S, Masuno, M, Kagechika, H, Nakabayashi, M, Ito, N. | | 登録日 | 2011-10-31 | | 公開日 | 2012-02-08 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.93 Å) | | 主引用文献 | Boron Cluster-based Development of Potent Nonsecosteroidal Vitamin D Receptor Ligands: Direct Observation of Hydrophobic Interaction between Protein Surface and Carborane
J.Am.Chem.Soc., 133, 2011
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1WSV
 | | Crystal Structure of Human T-protein of Glycine Cleavage System | | 分子名称: | Aminomethyltransferase, N-[4-({[(6S)-2-AMINO-4-HYDROXY-5-METHYL-5,6,7,8-TETRAHYDROPTERIDIN-6-YL]METHYL}AMINO)BENZOYL]-L-GLUTAMIC ACID, SULFATE ION | | 著者 | Okamura-Ikeda, K, Hosaka, H, Yoshimura, M, Yamashita, E, Toma, S, Nakagawa, A, Fujiwara, K, Motokawa, Y, Taniguchi, H. | | 登録日 | 2004-11-11 | | 公開日 | 2005-08-16 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | | 主引用文献 | Crystal Structure of Human T-protein of Glycine Cleavage System at 2.0A Resolution and its Implication for Understanding Non-ketotic Hyperglycinemia
J.Mol.Biol., 351, 2005
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3ESW
 | | Complex of yeast PNGase with GlcNAc2-IAc. | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase, UV excision repair protein RAD23, ... | | 著者 | Zhao, G, Zhou, X, Lennarz, W.J, Schindelin, H. | | 登録日 | 2008-10-06 | | 公開日 | 2008-11-11 | | 最終更新日 | 2023-09-06 | | 実験手法 | X-RAY DIFFRACTION (3.4 Å) | | 主引用文献 | Structural and mutational studies on the importance of oligosaccharide binding for the activity of yeast PNGase.
Glycobiology, 19, 2009
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1WSR
 | | Crystal Structure of Human T-protein of Glycine Cleavage System | | 分子名称: | Aminomethyltransferase, SULFATE ION | | 著者 | Okamura-Ikeda, K, Hosaka, H, Yoshimura, M, Yamashita, E, Toma, S, Nakagawa, A, Fujiwara, K, Motokawa, Y, Taniguchi, H. | | 登録日 | 2004-11-10 | | 公開日 | 2005-08-16 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Crystal Structure of Human T-protein of Glycine Cleavage System at 2.0A Resolution and its Implication for Understanding Non-ketotic Hyperglycinemia
J.Mol.Biol., 351, 2005
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7VI4
 | | Electron crystallographic structure of TIA-1 prion-like domain, A381T mutant | | 分子名称: | TIA-1 prion-like domain | | 著者 | Takaba, K, Maki-Yonekura, S, Sekiyama, N, Imamura, K, Kodama, T, Tochio, H, Yonekura, K. | | 登録日 | 2021-09-24 | | 公開日 | 2022-09-28 | | 最終更新日 | 2024-06-19 | | 実験手法 | ELECTRON CRYSTALLOGRAPHY (0.95 Å) | | 主引用文献 | ALS mutations in the TIA-1 prion-like domain trigger highly condensed pathogenic structures.
Proc.Natl.Acad.Sci.USA, 119, 2022
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7VI5
 | | Electron crystallographic structure of TIA-1 prion-like domain, wild type sequence | | 分子名称: | TIA-1 prion-like domain | | 著者 | Takaba, K, Maki-Yonekura, S, Sekiyama, N, Imamura, K, Kodama, T, Tochio, H, Yonekura, K. | | 登録日 | 2021-09-24 | | 公開日 | 2022-09-28 | | 最終更新日 | 2023-11-29 | | 実験手法 | ELECTRON CRYSTALLOGRAPHY (1.761 Å) | | 主引用文献 | ALS mutations in the TIA-1 prion-like domain trigger highly condensed pathogenic structures.
Proc.Natl.Acad.Sci.USA, 119, 2022
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6J9T
 | | Complex structure of Lactobacillus casei lactate dehydrogenase with fructose-1,6-bisphosphate | | 分子名称: | 1,6-di-O-phosphono-beta-D-fructofuranose, L-lactate dehydrogenase, SULFATE ION | | 著者 | Arai, K, Miyanaga, A, Uchikoba, H, Fushinobu, S, Taguchi, H. | | 登録日 | 2019-01-24 | | 公開日 | 2019-02-06 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | Crystal structure of penta mutant of L-lactate dehydrogenase from Lactobacillus casei
To Be Published
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3O0T
 | | Crystal structure of human phosphoglycerate mutase family member 5 (PGAM5) in complex with phosphate | | 分子名称: | 1,2-ETHANEDIOL, PHOSPHATE ION, Serine/threonine-protein phosphatase PGAM5, ... | | 著者 | Chaikuad, A, Alfano, I, Picaud, S, Filippakopoulos, P, Barr, A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Takeda, K, Ichijo, H, Knapp, S, Structural Genomics Consortium (SGC) | | 登録日 | 2010-07-20 | | 公開日 | 2010-10-06 | | 最終更新日 | 2024-05-22 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Structures of PGAM5 Provide Insight into Active Site Plasticity and Multimeric Assembly.
Structure, 25, 2017
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6J9S
 | | Penta mutant of Lactobacillus casei lactate dehydrogenase | | 分子名称: | GLYCEROL, L-lactate dehydrogenase, SULFATE ION | | 著者 | Arai, K, Miyanaga, A, Uchikoba, H, Fushinobu, S, Taguchi, H. | | 登録日 | 2019-01-24 | | 公開日 | 2019-02-06 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Crystal structure of penta mutant of L-lactate dehydrogenase from Lactobacillus casei
To Be Published
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6J9U
 | | Complex structure of Lactobacillus casei lactate dehydrogenase penta mutant with pyruvate | | 分子名称: | L-lactate dehydrogenase, PYRUVIC ACID, SULFATE ION | | 著者 | Arai, K, Miyanaga, A, Uchikoba, H, Fushinobu, S, Taguchi, H. | | 登録日 | 2019-01-24 | | 公開日 | 2019-02-06 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (2.79 Å) | | 主引用文献 | Crystal structure of penta mutant of L-lactate dehydrogenase from Lactobacillus casei
To Be Published
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6JML
 | | Re-refined structure of R-state L-lactate dehydrogenase fromLactobacillus casei | | 分子名称: | L-lactate dehydrogenase, SULFATE ION | | 著者 | Arai, K, Miyanaga, A, Uchikoba, H, Fushinobu, S, Taguchi, H. | | 登録日 | 2019-03-12 | | 公開日 | 2020-05-06 | | 最終更新日 | 2023-11-22 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Crystal structure of penta mutant of L-lactate dehydrogenase from Lactobacillus casei
To Be Published
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5H41
 | | Crystal Structure of 1,2-beta-oligoglucan phosphorylase from Lachnoclostridium phytofermentans in complex with sophorose, isofagomine, sulfate ion | | 分子名称: | 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE, SULFATE ION, Uncharacterized protein, ... | | 著者 | Nakajima, M, Tanaka, N, Furukawa, N, Nihira, T, Kodutsumi, Y, Takahashi, Y, Sugimoto, N, Miyanaga, A, Fushinobu, S, Taguchi, H, Nakai, H. | | 登録日 | 2016-10-28 | | 公開日 | 2017-03-01 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Mechanistic insight into the substrate specificity of 1,2-beta-oligoglucan phosphorylase from Lachnoclostridium phytofermentans
Sci Rep, 7, 2017
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5H40
 | | Crystal Structure of 1,2-beta-oligoglucan phosphorylase from Lachnoclostridium phytofermentans in complex with sophorose | | 分子名称: | CALCIUM ION, GLYCEROL, Uncharacterized protein, ... | | 著者 | Nakajima, M, Tanaka, N, Furukawa, N, Nihira, T, Kodutsumi, Y, Takahashi, Y, Sugimoto, N, Miyanaga, A, Fushinobu, S, Taguchi, H, Nakai, H. | | 登録日 | 2016-10-28 | | 公開日 | 2017-03-01 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Mechanistic insight into the substrate specificity of 1,2-beta-oligoglucan phosphorylase from Lachnoclostridium phytofermentans
Sci Rep, 7, 2017
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7X48
 | | The 0.86 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with pelargonic acid | | 分子名称: | Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ... | | 著者 | Sugiyama, S, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Murata, M. | | 登録日 | 2022-03-02 | | 公開日 | 2023-03-08 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (0.86 Å) | | 主引用文献 | The 0.86 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with pelargonic acid
To Be Published
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7X4J
 | | The 0.96 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with arachidic acid | | 分子名称: | Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ... | | 著者 | Sugiyama, S, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Murata, M. | | 登録日 | 2022-03-02 | | 公開日 | 2023-03-08 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (0.96 Å) | | 主引用文献 | The 0.96 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with arachidic acid
To Be Published
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7X50
 | | The 0.93 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with heneicosanoic acid | | 分子名称: | Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ... | | 著者 | Sugiyama, S, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Murata, M. | | 登録日 | 2022-03-03 | | 公開日 | 2023-03-08 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (0.93 Å) | | 主引用文献 | The 0.93 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with heneicosanoic acid
To Be Published
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7XBC
 | | The 0.92 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with lignoceric acid | | 分子名称: | 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, Fatty acid-binding protein, heart, ... | | 著者 | Sugiyama, S, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Murata, M. | | 登録日 | 2022-03-21 | | 公開日 | 2023-03-29 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (0.92 Å) | | 主引用文献 | The 0.92 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with lignoceric acid
To Be Published
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4NNJ
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