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5WFK
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BU of 5wfk by Molmil
70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Fislage, M, Frank, J.
登録日2017-07-12
公開日2018-05-02
最終更新日2019-11-20
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM shows stages of initial codon selection on the ribosome by aa-tRNA in ternary complex with GTP and the GTPase-deficient EF-TuH84A.
Nucleic Acids Res., 46, 2018
5WF0
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BU of 5wf0 by Molmil
70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Fislage, M, Frank, J.
登録日2017-07-11
公開日2018-05-02
最終更新日2019-11-20
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-EM shows stages of initial codon selection on the ribosome by aa-tRNA in ternary complex with GTP and the GTPase-deficient EF-TuH84A.
Nucleic Acids Res., 46, 2018
5WFS
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BU of 5wfs by Molmil
70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Fislage, M, Frank, J.
登録日2017-07-12
公開日2018-05-02
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Cryo-EM shows stages of initial codon selection on the ribosome by aa-tRNA in ternary complex with GTP and the GTPase-deficient EF-TuH84A.
Nucleic Acids Res., 46, 2018
7QLJ
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BU of 7qlj by Molmil
Trans structure of rsKiiro Illuminated at 290 K
分子名称: SULFATE ION, rsKiiro
著者van Thor, J.J, Baxter, J.M.
登録日2021-12-20
公開日2022-11-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.02 Å)
主引用文献Optical control of ultrafast structural dynamics in a fluorescent protein.
Nat.Chem., 15, 2023
4OW5
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BU of 4ow5 by Molmil
Structural basis for the enhancement of virulence by entomopoxvirus fusolin and its in vivo crystallization into viral spindles
分子名称: 1,2-ETHANEDIOL, Fusolin
著者Hijnen, M, Boudes, M, Aizel, K, Coulibaly, F.
登録日2014-01-31
公開日2015-03-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for the enhancement of virulence by viral spindles and their in vivo crystallization.
Proc.Natl.Acad.Sci.USA, 112, 2015
5HWM
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BU of 5hwm by Molmil
Crystal structure of keto-deoxy-D-galactarate dehydratase complexed with 2-oxoadipic acid
分子名称: 2-OXOADIPIC ACID, FORMIC ACID, Probable 5-dehydro-4-deoxyglucarate dehydratase
著者Taberman, H, Parkkinen, T, Hakulinen, N, Rouvinen, J.
登録日2016-01-29
公開日2016-03-23
実験手法X-RAY DIFFRACTION (2.097 Å)
主引用文献Structure and function of a decarboxylating Agrobacterium tumefaciens keto-deoxy-d-galactarate dehydratase.
Biochemistry, 53, 2014
7MLM
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BU of 7mlm by Molmil
Crystal structure of mouse TLR4/MD-2 in complex with sulfatides
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Su, L, Beutler, B.
登録日2021-04-28
公開日2021-07-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.104 Å)
主引用文献Sulfatides are endogenous ligands for the TLR4-MD-2 complex.
Proc.Natl.Acad.Sci.USA, 118, 2021
5HWN
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BU of 5hwn by Molmil
Crystal structure of keto-deoxy-D-galactarate dehydratase complexed with pyruvate
分子名称: FORMIC ACID, GLYCEROL, PYRUVIC ACID, ...
著者Taberman, H, Parkkinen, T, Hakulinen, N, Rouvinen, J.
登録日2016-01-29
公開日2016-03-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.499 Å)
主引用文献Structure and function of a decarboxylating Agrobacterium tumefaciens keto-deoxy-d-galactarate dehydratase.
Biochemistry, 53, 2014
3EP2
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BU of 3ep2 by Molmil
Model of Phe-tRNA(Phe) in the ribosomal pre-accommodated state revealed by cryo-EM
分子名称: 30S ribosomal protein S12, 50S ribosomal protein L11, Elongation factor Tu, ...
著者Frank, J, Li, W, Agirrezabala, X.
登録日2008-09-29
公開日2008-12-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Recognition of aminoacyl-tRNA: a common molecular mechanism revealed by cryo-EM.
Embo J., 27, 2008
8DB3
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BU of 8db3 by Molmil
Crystal structure of KaiC with truncated C-terminal coiled-coil domain
分子名称: ADENOSINE-5'-DIPHOSPHATE, Circadian clock protein KaiC
著者Padua, R.A.P, Grant, T, Pitsawong, W, Hoemberger, M.S, Otten, R, Bradshaw, N, Grigorieff, N, Kern, D.
登録日2022-06-14
公開日2023-03-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献From primordial clocks to circadian oscillators.
Nature, 616, 2023
8DBA
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BU of 8dba by Molmil
Crystal structure of dodecameric KaiC
分子名称: ADENOSINE-5'-DIPHOSPHATE, Circadian clock protein KaiC, MAGNESIUM ION
著者Padua, R.A.P, Grant, T, Pitsawong, W, Hoemberger, M.S, Otten, R, Bradshaw, N, Grigorieff, N, Kern, D.
登録日2022-06-14
公開日2023-03-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献From primordial clocks to circadian oscillators.
Nature, 616, 2023
5J84
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BU of 5j84 by Molmil
Crystal structure of L-arabinonate dehydratase in holo-form
分子名称: Dihydroxy-acid dehydratase, FE2/S2 (INORGANIC) CLUSTER, MAGNESIUM ION
著者Rahman, M.M, Rouvinen, J, Hakulinen, N.
登録日2016-04-07
公開日2017-06-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The Crystal Structure of a Bacterial l-Arabinonate Dehydratase Contains a [2Fe-2S] Cluster.
ACS Chem. Biol., 12, 2017
5JDA
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BU of 5jda by Molmil
Bacillus cereus CotH kinase plus Mg2+/AMP
分子名称: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, ...
著者Tomchick, D.R, Tagliabracci, V.S, Sreelatha, A.
登録日2016-04-15
公開日2016-05-18
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.401 Å)
主引用文献Phosphorylation of spore coat proteins by a family of atypical protein kinases.
Proc.Natl.Acad.Sci.USA, 113, 2016
5J85
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BU of 5j85 by Molmil
Ser480Ala mutant of L-arabinonate dehydratase
分子名称: Dihydroxyacid dehydratase/phosphogluconate dehydratase, FE2/S2 (INORGANIC) CLUSTER, MAGNESIUM ION
著者Rahman, M.M, Rouvinen, J, Hakulinen, N.
登録日2016-04-07
公開日2017-06-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The Crystal Structure of a Bacterial l-Arabinonate Dehydratase Contains a [2Fe-2S] Cluster.
ACS Chem. Biol., 12, 2017
5J83
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BU of 5j83 by Molmil
Crystal structure of L-arabinonate dehydratase in apo-form
分子名称: Dihydroxyacid dehydratase/phosphogluconate dehydratase
著者Rahman, M.M, Rouvinen, J, Hakulinen, N.
登録日2016-04-07
公開日2017-06-21
最終更新日2018-01-10
実験手法X-RAY DIFFRACTION (3.001 Å)
主引用文献The Crystal Structure of a Bacterial l-Arabinonate Dehydratase Contains a [2Fe-2S] Cluster.
ACS Chem. Biol., 12, 2017
5JD9
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BU of 5jd9 by Molmil
Bacillus cereus CotH kinase
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, Spore coat protein H
著者Tomchick, D.R, Tagliabracci, V.S, Sreelatha, A.
登録日2016-04-15
公開日2016-05-18
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Phosphorylation of spore coat proteins by a family of atypical protein kinases.
Proc.Natl.Acad.Sci.USA, 113, 2016
5HWJ
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BU of 5hwj by Molmil
Crystal structure of keto-deoxy-D-galactarate dehydratase
分子名称: FORMIC ACID, GLYCEROL, Probable 5-dehydro-4-deoxyglucarate dehydratase
著者Taberman, H, Parkkinen, T, Hakulinen, N, Rouvinen, J.
登録日2016-01-29
公開日2016-03-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.648 Å)
主引用文献Structure and function of a decarboxylating Agrobacterium tumefaciens keto-deoxy-d-galactarate dehydratase.
Biochemistry, 53, 2014
7OVH
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BU of 7ovh by Molmil
Crystal structure of the VIM-2 acquired metallo-beta-Lactamase in Complex with compound 14 (JMV-6931)
分子名称: ACETATE ION, Metallo-beta-lactamase VIM-2-like protein, UNKNOWN LIGAND, ...
著者Tassone, G, Benvenuti, M, Verdirosa, F, Sannio, F, Marcoccia, F, Docquier, J.D, Pozzi, C, Mangani, S.
登録日2021-06-14
公開日2021-10-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献1,2,4-Triazole-3-thione compounds with a 4-ethyl alkyl/aryl sulfide substituent are broad-spectrum metallo-beta-lactamase inhibitors with re-sensitization activity.
Eur.J.Med.Chem., 226, 2021
7OVE
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BU of 7ove by Molmil
Crystal structure of the VIM-2 acquired metallo-beta-Lactamase in Complex with compound 10 (JMV-7210)
分子名称: ACETATE ION, Metallo-beta-lactamase VIM-2-like protein, UNKNOWN LIGAND, ...
著者Tassone, G, Benvenuti, M, Verdirosa, F, Sannio, F, Mangani, S, Docquier, J.D, Pozzi, C, Marcoccia, F.
登録日2021-06-14
公開日2021-10-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献1,2,4-Triazole-3-thione compounds with a 4-ethyl alkyl/aryl sulfide substituent are broad-spectrum metallo-beta-lactamase inhibitors with re-sensitization activity.
Eur.J.Med.Chem., 226, 2021
7OVF
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BU of 7ovf by Molmil
Crystal structure of the VIM-2 acquired metallo-beta-Lactamase in Complex with compound 8 (JMV-7207)
分子名称: 4-[2-[(4-fluorophenyl)methylsulfanyl]ethyl]-3-phenyl-1H-1,2,4-triazole-5-thione, ACETATE ION, Metallo-beta-lactamase VIM-2-like protein, ...
著者Tassone, G, Benvenuti, M, Verdirosa, F, Sannio, F, Marcoccia, F, Docquier, J.D, Pozzi, C, Mangani, S.
登録日2021-06-14
公開日2021-10-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献1,2,4-Triazole-3-thione compounds with a 4-ethyl alkyl/aryl sulfide substituent are broad-spectrum metallo-beta-lactamase inhibitors with re-sensitization activity.
Eur.J.Med.Chem., 226, 2021
8OOI
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BU of 8ooi by Molmil
Full composite cryo-EM map of p97/VCP in ADP.Pi state
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Cheng, T.C, Sakata, E, Schuetz, A.K.
登録日2023-04-05
公開日2024-01-31
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.61 Å)
主引用文献Characterizing ATP processing by the AAA+ protein p97 at the atomic level.
Nat.Chem., 16, 2024
7ZC4
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BU of 7zc4 by Molmil
Cryo-EM structure of POLRMT mutant.
分子名称: DNA-directed RNA polymerase, mitochondrial
著者Das, H, Hallberg, B.M.
登録日2022-03-25
公開日2023-02-01
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献Non-coding 7S RNA inhibits transcription via mitochondrial RNA polymerase dimerization.
Cell, 185, 2022
5FHV
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BU of 5fhv by Molmil
Crystal structure of mCherry after reaction with 2-mercaptoethanol
分子名称: BETA-MERCAPTOETHANOL, HEXAETHYLENE GLYCOL, TRIETHYLENE GLYCOL, ...
著者De Zitter, E, Dedecker, P, Van Meervelt, L.
登録日2015-12-22
公開日2017-01-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Efficient switching of mCherry fluorescence using chemical caging.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8B3X
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BU of 8b3x by Molmil
High resolution crystal structure of dimeric SUDV VP40
分子名称: Matrix protein VP40
著者Werner, A.-D, Norris, M, Saphire, E.O, Becker, S.
登録日2022-09-17
公開日2023-06-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.531 Å)
主引用文献The C-terminus of Sudan ebolavirus VP40 contains a functionally important CX n C motif, a target for redox modifications.
Structure, 31, 2023
8AW0
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BU of 8aw0 by Molmil
Crystal structure of PksD, the trans-acting acyl hydrolase domain from the bacillaene trans-AT PKS (native)
分子名称: Polyketide biosynthesis acyltransferase homolog PksD, ZINC ION
著者Fage, C.D, Challis, G.L, Lewandowski, J, Jenner, M.
登録日2022-08-28
公開日2023-08-09
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for acyl hydrolysis in trans-AT polyketide synthases
To Be Published

222415

件を2024-07-10に公開中

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