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3OCI
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BU of 3oci by Molmil
Crystal structure of TBP (TATA box binding protein)
分子名称: 1,2-ETHANEDIOL, TRANSCRIPTION INITIATION FACTOR TFIID (TFIID-1)
著者Cui, S, Wollmann, P, Moldt, M, Hopfner, K.-P.
登録日2010-08-10
公開日2011-07-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献Structure and mechanism of the Swi2/Snf2 remodeller Mot1 in complex with its substrate TBP.
Nature, 475, 2011
5L3P
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BU of 5l3p by Molmil
Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Arenz, S, Wilson, D.N.
登録日2016-05-24
公開日2016-07-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献The stringent factor RelA adopts an open conformation on the ribosome to stimulate ppGpp synthesis.
Nucleic Acids Res., 44, 2016
7O9F
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BU of 7o9f by Molmil
Bacillus subtilis Ffh in complex with ppGpp
分子名称: GUANOSINE-5',3'-TETRAPHOSPHATE, MAGNESIUM ION, Signal recognition particle protein
著者Czech, L, Mais, C.-N, Bange, G.
登録日2021-04-16
公開日2022-02-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Inhibition of SRP-dependent protein secretion by the bacterial alarmone (p)ppGpp.
Nat Commun, 13, 2022
7O9I
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BU of 7o9i by Molmil
Escherichia coli Ffh in complex with pppGpp
分子名称: Signal recognition particle protein, guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate)
著者Czech, L, Mais, C.-N, Bange, G.
登録日2021-04-16
公開日2022-02-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Inhibition of SRP-dependent protein secretion by the bacterial alarmone (p)ppGpp.
Nat Commun, 13, 2022
7O9G
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BU of 7o9g by Molmil
Escherichia coli Ffh in complex with ppGpp
分子名称: GUANOSINE-5',3'-TETRAPHOSPHATE, MAGNESIUM ION, Signal recognition particle protein
著者Czech, L, Mais, C.-N, Bange, G.
登録日2021-04-16
公開日2022-02-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Inhibition of SRP-dependent protein secretion by the bacterial alarmone (p)ppGpp.
Nat Commun, 13, 2022
7O9H
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BU of 7o9h by Molmil
Escherichia coli FtsY in complex with pppGpp
分子名称: Signal recognition particle receptor FtsY, guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate)
著者Czech, L, Mais, C.-N, Bange, G.
登録日2021-04-16
公開日2022-02-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Inhibition of SRP-dependent protein secretion by the bacterial alarmone (p)ppGpp.
Nat Commun, 13, 2022
6UD7
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BU of 6ud7 by Molmil
Crystal structure of full-length human DCAF15-DDB1(deltaBPB)-DDA1-RBM39 in complex with indisulam
分子名称: DDB1- and CUL4-associated factor 15, DET1- and DDB1-associated protein 1, DNA damage-binding protein 1,DNA damage-binding protein 1, ...
著者Bussiere, D.E, Shu, W, Xie, L, Knapp, M.
登録日2019-09-18
公開日2019-12-18
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of indisulam-mediated RBM39 recruitment to DCAF15 E3 ligase complex.
Nat.Chem.Biol., 16, 2020
6UE5
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BU of 6ue5 by Molmil
Crystal structure of full-length human DCAF15-DDB1-deltaPBP-DDA1-RBM39 in complex with 4-(aminomethyl)-N-(3-cyano-4-methyl-1H-indol-7-yl)benzenesulfonamide
分子名称: 4-(aminomethyl)-N-(3-cyano-4-methyl-1H-indol-7-yl)benzene-1-sulfonamide, DDB1- and CUL4-associated factor 15, DET1- and DDB1-associated protein 1, ...
著者Knapp, M.S, Shu, W, Xie, L, Bussiere, D.E.
登録日2019-09-20
公開日2019-12-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Structural basis of indisulam-mediated RBM39 recruitment to DCAF15 E3 ligase complex.
Nat.Chem.Biol., 16, 2020
3HYB
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BU of 3hyb by Molmil
Crystal structure of RbcX from Anabaena, crystal form II
分子名称: RbcX protein, SULFATE ION
著者Bracher, A, Liu, C.
登録日2009-06-22
公開日2010-01-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Coupled chaperone action in folding and assembly of hexadecameric Rubisco.
Nature, 463, 2010
5M6S
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BU of 5m6s by Molmil
folding intermediate of spectrin R16
分子名称: spectrin
著者Nilsson, O.B, Nickson, A.A, Clarke, J.
登録日2016-10-25
公開日2017-01-11
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Cotranslational folding of spectrin domains via partially structured states.
Nat. Struct. Mol. Biol., 24, 2017
6SJ7
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BU of 6sj7 by Molmil
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to RBM39 and Indisulam
分子名称: DDB1- and CUL4-associated factor 15, DET1- and DDB1-associated protein 1, DNA damage-binding protein 1, ...
著者Srinivas, H.
登録日2019-08-12
公開日2019-12-18
最終更新日2019-12-25
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献Structural basis of indisulam-mediated RBM39 recruitment to DCAF15 E3 ligase complex.
Nat.Chem.Biol., 16, 2020
2RF4
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BU of 2rf4 by Molmil
Crystal structure of the RNA Polymerase I subcomplex A14/43
分子名称: DNA-directed RNA polymerase I subunit RPA4
著者Geiger, S.R, Kuhn, C.D, Cramer, P.
登録日2007-09-28
公開日2008-01-15
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Functional architecture of RNA polymerase I.
Cell(Cambridge,Mass.), 131, 2007
4GMQ
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BU of 4gmq by Molmil
Ribosome-binding domain of Zuo1
分子名称: Putative ribosome associated protein
著者Kopp, J, Bange, G, Sinning, I.
登録日2012-08-16
公開日2012-12-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural characterization of a eukaryotic chaperone-the ribosome-associated complex.
Nat.Struct.Mol.Biol., 20, 2013
4GNI
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BU of 4gni by Molmil
Structure of the Ssz1 ATPase bound to ATP and Magnesium
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Putative heat shock protein
著者Bange, G, Sinning, I.
登録日2012-08-17
公開日2012-12-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.796 Å)
主引用文献Structural characterization of a eukaryotic chaperone-the ribosome-associated complex.
Nat.Struct.Mol.Biol., 20, 2013
6EMF
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BU of 6emf by Molmil
Crystal structure of Rrp1 from Chaetomium thermophilum in space group C2
分子名称: 1,2-ETHANEDIOL, G0S4M2, PROLINE
著者Ahmed, Y.L, Sinning, I.
登録日2017-10-02
公開日2017-12-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Cell, 171, 2017
6EN7
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BU of 6en7 by Molmil
Crystal structure of the ribosome assembly factor Nsa1
分子名称: Ribosome biogenesis protein NSA1
著者Altegoer, F, Bange, G.
登録日2017-10-04
公開日2017-12-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.403 Å)
主引用文献Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Cell, 171, 2017
6ENU
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BU of 6enu by Molmil
Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)
分子名称: 16S ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Huter, P, Arenz, S, Wilson, D.N.
登録日2017-10-06
公開日2017-11-22
最終更新日2018-01-31
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural Basis for Polyproline-Mediated Ribosome Stalling and Rescue by the Translation Elongation Factor EF-P.
Mol. Cell, 68, 2017
6EMG
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BU of 6emg by Molmil
Crystal structure of Rrp1 from Chaetomium thermophilum in space group P6322
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, G0S4M2, ...
著者Ahmed, Y.L, Sinning, I.
登録日2017-10-02
公開日2017-12-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Cell, 171, 2017
6ENF
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BU of 6enf by Molmil
Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Huter, P, Arenz, S, Wilson, D.N.
登録日2017-10-04
公開日2017-11-22
最終更新日2018-01-31
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural Basis for Polyproline-Mediated Ribosome Stalling and Rescue by the Translation Elongation Factor EF-P.
Mol. Cell, 68, 2017
4OI8
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BU of 4oi8 by Molmil
RAGE is a nucleic acid receptor that promotes inflammatory responses to DNA.
分子名称: 5'-D(*CP*CP*AP*TP*GP*AP*CP*TP*GP*TP*AP*GP*GP*AP*AP*AP*CP*TP*CP*TP*AP*GP*A)-3', 5'-D(*CP*TP*CP*TP*AP*GP*AP*GP*TP*TP*TP*CP*CP*TP*AP*CP*AP*GP*TP*CP*AP*TP*G)-3', Advanced glycosylation end product-specific receptor
著者Jin, T, Jiang, J, Xiao, T.
登録日2014-01-19
公開日2014-04-30
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.101 Å)
主引用文献RAGE is a nucleic acid receptor that promotes inflammatory responses to DNA.
J.Exp.Med., 210, 2013
4NWB
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BU of 4nwb by Molmil
Crystal structure of Mrt4
分子名称: SULFATE ION, mRNA turnover protein 4
著者Holdermann, I, Sinning, I.
登録日2013-12-06
公開日2014-03-26
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献60S ribosome biogenesis requires rotation of the 5S ribonucleoprotein particle.
Nat Commun, 5, 2014
6ENJ
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BU of 6enj by Molmil
Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)
分子名称: 16S ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Huter, P, Wilson, D.N.
登録日2017-10-05
公開日2017-11-22
最終更新日2019-10-30
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural Basis for Polyproline-Mediated Ribosome Stalling and Rescue by the Translation Elongation Factor EF-P.
Mol. Cell, 68, 2017
4OI7
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BU of 4oi7 by Molmil
RAGE recognizes nucleic acids and promotes inflammatory responses to DNA
分子名称: 1,2-ETHANEDIOL, 5'-D(*CP*AP*CP*GP*TP*TP*CP*GP*TP*AP*GP*CP*AP*TP*CP*GP*TP*TP*GP*CP*AP*G)-3', 5'-D(*CP*TP*GP*CP*AP*AP*CP*GP*AP*TP*GP*CP*TP*AP*CP*GP*AP*AP*CP*GP*TP*G)-3', ...
著者Jin, T, Jiang, J, Xiao, T.
登録日2014-01-19
公開日2014-04-30
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3.104 Å)
主引用文献RAGE is a nucleic acid receptor that promotes inflammatory responses to DNA.
J.Exp.Med., 210, 2013
1WER
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BU of 1wer by Molmil
RAS-GTPASE-ACTIVATING DOMAIN OF HUMAN P120GAP
分子名称: P120GAP
著者Scheffzek, K, Lautwein, A, Kabsch, W, Ahmadian, M.R, Wittinghofer, A.
登録日1996-11-20
公開日1997-12-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of the GTPase-activating domain of human p120GAP and implications for the interaction with Ras.
Nature, 384, 1996
1RP5
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BU of 1rp5 by Molmil
PBP2x from Streptococcus pneumoniae strain 5259 with reduced susceptibility to beta-lactam antibiotics
分子名称: SULFATE ION, penicillin-binding protein 2x
著者Pernot, L, Chesnel, L, Legouellec, A, Croize, J, Vernet, T, Dideberg, O, Dessen, A.
登録日2003-12-03
公開日2004-02-03
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献A PBP2x from a clinical isolate of Streptococcus pneumoniae exhibits an alternative mechanism for reduction of susceptibility to beta-lactam antibiotics.
J.Biol.Chem., 279, 2004

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