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5YSH
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BU of 5ysh by Molmil
Diol dehydratase - alpha/T172A mutant complexed with AdoCbl, aerobically-prepared crystal
分子名称: 5'-DEOXYADENOSINE, CALCIUM ION, COBALAMIN, ...
著者Shibata, N.
登録日2017-11-14
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Direct Participation of a Peripheral Side Chain of a Corrin Ring in Coenzyme B12Catalysis.
Angew. Chem. Int. Ed. Engl., 57, 2018
1UCG
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BU of 1ucg by Molmil
Crystal structure of Ribonuclease MC1 N71T mutant
分子名称: MANGANESE (II) ION, Ribonuclease MC
著者Suzuki, A, Numata, T, Yao, M, Tanaka, I, Kimura, M.
登録日2003-04-14
公開日2003-04-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structures of the ribonuclease MC1 mutants N71T and N71S in complex with 5'-GMP: structural basis for alterations in substrate specificity
Biochemistry, 42, 2003
7Y3J
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BU of 7y3j by Molmil
24B3 antibody-peptide complex
分子名称: 24B3 Heavy chain, 24B3 Light chain, ALA-LEU-VAL-PHE-PHE-ALA-PRO-ALA-VAL-GLY-SER
著者Irie, K, Irie, Y, Kita, A, Miki, K.
登録日2022-06-11
公開日2022-08-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis of the 24B3 antibody against the toxic conformer of amyloid beta with a turn at positions 22 and 23.
Biochem.Biophys.Res.Commun., 621, 2022
5X02
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BU of 5x02 by Molmil
Crystal structure of the FLT3 kinase domain bound to the inhibitor FF-10101
分子名称: N-[(2S)-1-[5-[2-[(4-cyanophenyl)amino]-4-(propylamino)pyrimidin-5-yl]pent-4-ynylamino]-1-oxidanylidene-propan-2-yl]-4-(dimethylamino)-N-methyl-but-2-enamide, Receptor-type tyrosine-protein kinase FLT3, SULFATE ION
著者Fujikawa, N, Hirano, D, Takasaki, M, Terada, D, Hagiwara, S, Park, S.-Y, Sugiyama, K.
登録日2017-01-19
公開日2018-01-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献A novel irreversible FLT3 inhibitor, FF-10101, shows excellent efficacy against AML cells withFLT3mutations.
Blood, 131, 2018
7Z74
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BU of 7z74 by Molmil
PI3KC2a core in complex with PITCOIN2
分子名称: 1,2-ETHANEDIOL, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, ~{N}-[4-(3-hydroxyphenyl)-1,3-thiazol-2-yl]-2-[4-oxidanylidene-3-(2-phenylethyl)pteridin-2-yl]sulfanyl-ethanamide
著者Lo, W.T, Roske, Y, Daumke, O, Haucke, V.
登録日2022-03-15
公開日2022-08-31
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Development of selective inhibitors of phosphatidylinositol 3-kinase C2 alpha.
Nat.Chem.Biol., 19, 2023
7Z75
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BU of 7z75 by Molmil
PI3KC2a core in complex with PITCOIN3
分子名称: 1,2-ETHANEDIOL, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, SULFATE ION, ...
著者Lo, W.T, Roske, Y, Daumke, O, Haucke, V.
登録日2022-03-15
公開日2022-08-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Development of selective inhibitors of phosphatidylinositol 3-kinase C2 alpha.
Nat.Chem.Biol., 19, 2023
7VKF
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BU of 7vkf by Molmil
Reduced enzyme of FAD-dpendent Glucose Dehydrogenase complex with D-glucono-1,5-lactone at pH8.5
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, D-glucono-1,5-lactone, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, ...
著者Nakajima, Y, Nishiya, Y, Ito, K.
登録日2021-09-29
公開日2022-10-05
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Conformational change of catalytic residue in reduced enzyme of FAD-dependent Glucose Dehydrogenase at pH6.5
To Be Published
1WE0
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BU of 1we0 by Molmil
Crystal structure of peroxiredoxin (AhpC) from Amphibacillus xylanus
分子名称: AMMONIUM ION, alkyl hydroperoxide reductase C
著者Kitano, K, Kita, A, Hakoshima, T, Niimura, Y, Miki, K.
登録日2004-05-21
公開日2005-03-29
最終更新日2018-02-07
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of decameric peroxiredoxin (AhpC) from Amphibacillus xylanus
Proteins, 59, 2005
7VKD
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BU of 7vkd by Molmil
Reduced enzyme of FAD-dpendent Glucose Dehydrogenase at pH6.5
分子名称: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GMC oxidoreductase
著者Nakajima, Y, Nishiya, Y, Ito, K.
登録日2021-09-29
公開日2022-10-05
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Conformational change of catalytic residue in reduced enzyme of FAD-dependent Glucose Dehydrogenase at pH6.5
To Be Published
5ZLQ
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BU of 5zlq by Molmil
Crystal Structure of C1orf123
分子名称: UPF0587 protein C1orf123, ZINC ION
著者Furukawa, Y, Lim, C.T, Tosha, T.
登録日2018-03-29
公開日2018-10-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Identification of a novel zinc-binding protein, C1orf123, as an interactor with a heavy metal-associated domain
PLoS ONE, 13, 2018
1RSM
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BU of 1rsm by Molmil
THE 2-ANGSTROMS RESOLUTION STRUCTURE OF A THERMOSTABLE RIBONUCLEASE A CHEMICALLY CROSS-LINKED BETWEEN LYSINE RESIDUES 7 AND 41
分子名称: DINITROPHENYLENE, RIBONUCLEASE A
著者Weber, P.C, Sheriff, S, Ohlendorf, D.H, Finzel, B.C, Salemme, F.R.
登録日1985-08-27
公開日1986-01-21
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The 2-A resolution structure of a thermostable ribonuclease A chemically cross-linked between lysine residues 7 and 41.
Proc.Natl.Acad.Sci.USA, 82, 1985
2ZYE
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BU of 2zye by Molmil
Structure of HIV-1 Protease in Complex with Potent Inhibitor KNI-272 Determined by Neutron Crystallography
分子名称: (4R)-N-tert-butyl-3-[(2S,3S)-2-hydroxy-3-({N-[(isoquinolin-5-yloxy)acetyl]-S-methyl-L-cysteinyl}amino)-4-phenylbutanoyl]-1,3-thiazolidine-4-carboxamide, protease
著者Adachi, M, Ohhara, T, Tamada, T, Okazaki, N, Kuroki, R.
登録日2009-01-20
公開日2009-03-24
最終更新日2024-05-29
実験手法NEUTRON DIFFRACTION (1.9 Å)
主引用文献Structure of HIV-1 protease in complex with potent inhibitor KNI-272 determined by high-resolution X-ray and neutron crystallography.
Proc.Natl.Acad.Sci.USA, 2009
2CW9
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BU of 2cw9 by Molmil
Crystal structure of human Tim44 C-terminal domain
分子名称: PENTAETHYLENE GLYCOL, translocase of inner mitochondrial membrane
著者Handa, N, Kishishita, S, Morita, S, Kinoshita, Y, Nagano, Y, Uda, H, Terada, T, Uchikubo, T, Takemoto, C, Jin, Z, Chrzas, J, Chen, L, Liu, Z.-J, Wang, B.-C, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-17
公開日2005-12-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the human Tim44 C-terminal domain in complex with pentaethylene glycol: ligand-bound form.
Acta Crystallogr.,Sect.D, 63, 2007
5YC2
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BU of 5yc2 by Molmil
Crystal structure of inner membrane protein Bqt4 in complex with telomeric protein Rap1
分子名称: DNA-binding protein rap1, Ubiquitin-like protein SMT3,Bouquet formation protein 4
著者Chen, Y, Hu, C.
登録日2017-09-06
公開日2018-11-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.704 Å)
主引用文献Structural insights into chromosome attachment to the nuclear envelope by an inner nuclear membrane protein Bqt4 in fission yeast.
Nucleic Acids Res., 47, 2019
5YBX
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BU of 5ybx by Molmil
Crystal structure of the N-terminal domain of Bqt4 in S.pombe
分子名称: Bouquet formation protein 4
著者Hu, C, Chen, Y.
登録日2017-09-05
公開日2018-09-19
最終更新日2019-02-20
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献The Inner Nuclear Membrane Protein Bqt4 in Fission Yeast Contains a DNA-Binding Domain Essential for Telomere Association with the Nuclear Envelope.
Structure, 27, 2019
7X7X
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BU of 7x7x by Molmil
Human serum albumin complex with deschloro-aripiprazole
分子名称: 7-[4-(4-phenylpiperazin-1-yl)butoxy]-3,4-dihydro-1H-quinolin-2-one, PHOSPHATE ION, Serum albumin
著者Kawai, A, Otagiri, M.
登録日2022-03-10
公開日2022-09-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Chlorine Atoms of an Aripiprazole Molecule Control the Geometry and Motion of Aripiprazole and Deschloro-aripiprazole in Subdomain IIIA of Human Serum Albumin.
Acs Omega, 7, 2022
5YCA
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BU of 5yca by Molmil
Crystal structure of inner membrane protein Bqt4 in complex with LEM2
分子名称: Lap-Emerin-Man domain protein 2, Ubiquitin-like protein SMT3,Bouquet formation protein 4
著者Chen, Y, Hu, C.
登録日2017-09-07
公開日2018-11-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Structural insights into chromosome attachment to the nuclear envelope by an inner nuclear membrane protein Bqt4 in fission yeast.
Nucleic Acids Res., 47, 2019
5XJM
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BU of 5xjm by Molmil
Complex structure of angiotensin II type 2 receptor with Fab
分子名称: FabH, FabL, Sar1, ...
著者Asada, H, Horita, S, Shimamura, T, Iwata, S.
登録日2017-05-02
公開日2018-07-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of the human angiotensin II type 2 receptor bound to an angiotensin II analog
Nat. Struct. Mol. Biol., 25, 2018
5XHG
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BU of 5xhg by Molmil
Crystal structure of Trastuzumab Fab fragment bearing Ne-(o-azidobenzyloxycarbonyl)-L-lysine
分子名称: (2-azidophenyl)methyl hydrogen carbonate, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
著者Kuratani, M, Yanagisawa, T, Sakamoto, K, Yokoyama, S.
登録日2017-04-20
公開日2017-12-20
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Extensive Survey of Antibody Invariant Positions for Efficient Chemical Conjugation Using Expanded Genetic Codes.
Bioconjug. Chem., 28, 2017
5X9P
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BU of 5x9p by Molmil
Crystal structure of the BCL6 BTB domain in complex with Compound 5
分子名称: 3-[[4-chloranyl-2-nitro-5-[(2-oxidanylidene-1,3-dihydrobenzimidazol-5-yl)amino]phenyl]amino]propanoic acid, B-cell lymphoma 6 protein
著者Sogabe, S, Ida, K, Lane, W, Snell, G.
登録日2017-03-08
公開日2017-08-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Discovery of a novel B-cell lymphoma 6 (BCL6)-corepressor interaction inhibitor by utilizing structure-based drug design
Bioorg. Med. Chem., 25, 2017
5X5M
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BU of 5x5m by Molmil
Crystal structure of a hydrolase encoded by lin2189 from Listeria innocua
分子名称: (+)-Yatakemycin, DIMETHYL SULFOXIDE, Lin2189 protein
著者Zhang, J.
登録日2017-02-16
公開日2017-12-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.211 Å)
主引用文献GyrI-like proteins catalyze cyclopropanoid hydrolysis to confer cellular protection
Nat Commun, 8, 2017
6A6W
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BU of 6a6w by Molmil
Crystal structure of fission yeast inner membrane protein Bqt4 in complex with Sad1
分子名称: Bouquet formation protein 4, Spindle pole body-associated protein sad1
著者Chen, Y, Hu, C.
登録日2018-06-29
公開日2018-11-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.601 Å)
主引用文献Structural insights into chromosome attachment to the nuclear envelope by an inner nuclear membrane protein Bqt4 in fission yeast.
Nucleic Acids Res., 47, 2019
5X9O
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BU of 5x9o by Molmil
Crystal structure of the BCL6 BTB domain in complex with Compound 1a
分子名称: 1,2-ETHANEDIOL, 5-[(2-chloranyl-4-nitro-phenyl)amino]-1,3-dihydrobenzimidazol-2-one, B-cell lymphoma 6 protein, ...
著者Sogabe, S, Ida, K, Lane, W, Snell, G.
登録日2017-03-08
公開日2017-08-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Discovery of a novel B-cell lymphoma 6 (BCL6)-corepressor interaction inhibitor by utilizing structure-based drug design
Bioorg. Med. Chem., 25, 2017
5XHF
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BU of 5xhf by Molmil
Crystal structure of Trastuzumab Fab fragment bearing p-azido-L-phenylalanine
分子名称: polypeptide (H chain), polypeptide (L chain)
著者Kuratani, M, Yanagisawa, T, Sakamoto, K, Yokoyama, S.
登録日2017-04-20
公開日2017-12-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.205 Å)
主引用文献Extensive Survey of Antibody Invariant Positions for Efficient Chemical Conjugation Using Expanded Genetic Codes.
Bioconjug. Chem., 28, 2017
6A3J
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BU of 6a3j by Molmil
Levoglucosan dehydrogenase, complex with NADH and L-sorbose
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Putative dehydrogenase, ...
著者Sugiura, M, Yamada, C, Arakawa, T, Fushinobu, S.
登録日2018-06-15
公開日2018-09-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Identification, functional characterization, and crystal structure determination of bacterial levoglucosan dehydrogenase.
J. Biol. Chem., 293, 2018

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