Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5GZR
DownloadVisualize
BU of 5gzr by Molmil
Zika virus E protein complexed with a neutralizing antibody Z23-Fab
分子名称: Z23 Fab heavy chain, Z23 Fab light chain, structural protein E, ...
著者Gao, G.G, Shi, Y, Peng, R, Liu, S.
登録日2016-10-01
公開日2016-11-30
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (9.4 Å)
主引用文献Molecular determinants of human neutralizing antibodies isolated from a patient infected with Zika virus
Sci Transl Med, 8, 2016
4J3F
DownloadVisualize
BU of 4j3f by Molmil
Crystal Structure of FabI from F. tularensis in complex with novel inhibitors based on the benzimidazole scaffold.
分子名称: 1-(4-methoxy-3-methylbenzyl)-5,6,7,8-tetrahydro-1H-naphtho[2,3-d]imidazole, ACETATE ION, Enoyl-[acyl-carrier-protein] reductase [NADH], ...
著者Mehboob, S, Boci, T, Brubaker, L, Santarsiero, B.D, Johnson, M.E.
登録日2013-02-05
公開日2014-07-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural and biological evaluation of a novel series of benzimidazole inhibitors of Francisella tularensis enoyl-ACP reductase (FabI).
Bioorg.Med.Chem.Lett., 25, 2015
5Y7W
DownloadVisualize
BU of 5y7w by Molmil
Crystal structure of the Nco-A1 PAS-B domain with YL-2
分子名称: Nuclear receptor coactivator 1, YL-2 peptide
著者Lee, Y.J, Yoon, H.S, Lee, J.H, Bae, J.H, Song, J.Y, Lim, H.S.
登録日2017-08-18
公開日2017-11-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Targeted Inhibition of the NCOA1/STAT6 Protein-Protein Interaction
J. Am. Chem. Soc., 139, 2017
4J1N
DownloadVisualize
BU of 4j1n by Molmil
Crystal structures of FabI from F. tularensis in complex with novel inhibitors based on the benzimidazole scaffold
分子名称: 1-(4-methoxy-3-methylbenzyl)-1,5,6,7-tetrahydroindeno[5,6-d]imidazole, Enoyl-[acyl-carrier-protein] reductase [NADH], GLYCEROL, ...
著者Mehboob, S, Boci, T, Brubaker, L, Santarsiero, B.D, Johnson, M.E.
登録日2013-02-01
公開日2014-07-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural and biological evaluation of a novel series of benzimidazole inhibitors of Francisella tularensis enoyl-ACP reductase (FabI).
Bioorg.Med.Chem.Lett., 25, 2015
4J4T
DownloadVisualize
BU of 4j4t by Molmil
Crystal Structure of FabI from F. tularensis in complex with novel inhibitors based on the benzimidazole scaffold
分子名称: 1-(1,3-benzodioxol-5-ylmethyl)-5,6,7,8-tetrahydro-1H-naphtho[2,3-d]imidazole, ACETATE ION, Enoyl-[acyl-carrier-protein] reductase [NADH], ...
著者Mehboob, S, Boci, T, Brubaker, L, Santarsiero, B.D, Johnson, M.E.
登録日2013-02-07
公開日2014-07-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Structural and biological evaluation of a novel series of benzimidazole inhibitors of Francisella tularensis enoyl-ACP reductase (FabI).
Bioorg.Med.Chem.Lett., 25, 2015
4JDR
DownloadVisualize
BU of 4jdr by Molmil
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase from escherichia coli
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Dihydrolipoyl dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Chandrasekhar, K, Arjunan, P, Furey, W.
登録日2013-02-25
公開日2013-04-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Insight to the Interaction of the Dihydrolipoamide Acetyltransferase (E2) Core with the Peripheral Components in the Escherichia coli Pyruvate Dehydrogenase Complex via Multifaceted Structural Approaches.
J.Biol.Chem., 288, 2013
3F3M
DownloadVisualize
BU of 3f3m by Molmil
Six Crystal Structures of Two Phosphopantetheine Adenylyltransferases Reveal an Alternative Ligand Binding Mode and an Associated Structural Change
分子名称: 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE, Phosphopantetheine adenylyltransferase
著者Lee, H.H, Yoon, H.J, Suh, S.W.
登録日2008-10-31
公開日2009-10-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The structure of Staphylococcus aureus phosphopantetheine adenylyltransferase in complex with 3'-phosphoadenosine 5'-phosphosulfate reveals a new ligand-binding mode
Acta Crystallogr.,Sect.F, 65, 2009
2MK5
DownloadVisualize
BU of 2mk5 by Molmil
Solution structure of a protein domain
分子名称: Endolysin
著者Feng, Y, Gu, J.
登録日2014-01-24
公開日2014-05-28
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural and biochemical characterization reveals LysGH15 as an unprecedented "EF-hand-like" calcium-binding phage lysin.
Plos Pathog., 10, 2014
2ANR
DownloadVisualize
BU of 2anr by Molmil
Crystal structure (II) of Nova-1 KH1/KH2 domain tandem with 25nt RNA hairpin
分子名称: 5'-R(*CP*(5BU)P*CP*GP*CP*GP*GP*AP*UP*CP*AP*GP*UP*CP*AP*CP*CP*CP*AP*AP*GP*CP*GP*AP*G)-3', MAGNESIUM ION, POTASSIUM ION, ...
著者Malinina, L, Teplova, M, Musunuru, K, Teplov, A, Darnell, J.C, Burley, S.K, Darnell, R.B, Patel, D.J.
登録日2005-08-11
公開日2006-10-24
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Protein-RNA and protein-protein recognition by dual KH1/2 domains of the neuronal splicing factor Nova-1.
Structure, 19, 2011
2ANN
DownloadVisualize
BU of 2ann by Molmil
Crystal structure (I) of Nova-1 KH1/KH2 domain tandem with 25 nt RNA hairpin
分子名称: 5'-R(*CP*GP*CP*GP*CP*GP*GP*AP*UP*CP*AP*GP*UP*CP*AP*CP*CP*CP*AP*AP*GP*CP*GP*CP*G)-3', MAGNESIUM ION, POTASSIUM ION, ...
著者Malinina, L, Teplova, M, Musunuru, K, Teplov, A, Darnell, J.C, Burley, S.K, Darnell, R.B, Patel, D.J.
登録日2005-08-11
公開日2006-10-24
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Protein-RNA and protein-protein recognition by dual KH1/2 domains of the neuronal splicing factor Nova-1.
Structure, 19, 2011
5YSX
DownloadVisualize
BU of 5ysx by Molmil
Structure of P domain of GII.2 Noroviruses
分子名称: VP1
著者Duan, Z, Ao, Y.
登録日2017-11-16
公開日2018-08-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.202 Å)
主引用文献Genetic Analysis of Reemerging GII.P16-GII.2 Noroviruses in 2016-2017 in China.
J. Infect. Dis., 218, 2018
5GV5
DownloadVisualize
BU of 5gv5 by Molmil
Crystal structure of Candida antarctica Lipase B with active Ser105 modified with a phosphonate inhibitor
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lipase B, ...
著者Park, S.Y, Lee, H.
登録日2016-09-02
公開日2017-09-13
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Structural and Experimental Evidence for the Enantiomeric Recognition toward a Bulky sec-Alcohol by Candida antarctica Lipase B
Acs Catalysis, 6, 2016
3LPY
DownloadVisualize
BU of 3lpy by Molmil
Crystal structure of the RRM domain of CyP33
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Peptidyl-prolyl cis-trans isomerase E, SULFATE ION
著者Wang, Z, Patel, D.J.
登録日2010-02-07
公開日2010-07-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Pro isomerization in MLL1 PHD3-bromo cassette connects H3K4me readout to CyP33 and HDAC-mediated repression.
Cell(Cambridge,Mass.), 141, 2010
3LQH
DownloadVisualize
BU of 3lqh by Molmil
Crystal structure of MLL1 PHD3-Bromo in the free form
分子名称: Histone-lysine N-methyltransferase MLL, ZINC ION
著者Wang, Z, Patel, D.J.
登録日2010-02-09
公開日2010-07-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Pro isomerization in MLL1 PHD3-bromo cassette connects H3K4me readout to CyP33 and HDAC-mediated repression.
Cell(Cambridge,Mass.), 141, 2010
3LQJ
DownloadVisualize
BU of 3lqj by Molmil
Crystal structure of MLL1 PHD3-Bromo complexed with H3(1-9)K4me3 peptide
分子名称: Histone H3, MLL1 PHD3-Bromo, ZINC ION
著者Wang, Z, Patel, D.J.
登録日2010-02-09
公開日2010-07-07
最終更新日2017-07-26
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pro isomerization in MLL1 PHD3-bromo cassette connects H3K4me readout to CyP33 and HDAC-mediated repression.
Cell(Cambridge,Mass.), 141, 2010
3LQI
DownloadVisualize
BU of 3lqi by Molmil
Crystal structure of MLL1 PHD3-Bromo complexed with H3(1-9)K4me2 peptide
分子名称: Histone H3, MLL1 PHD3-Bromo, ZINC ION
著者Wang, Z, Patel, D.J.
登録日2010-02-09
公開日2010-07-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Pro isomerization in MLL1 PHD3-bromo cassette connects H3K4me readout to CyP33 and HDAC-mediated repression.
Cell(Cambridge,Mass.), 141, 2010
2MBE
DownloadVisualize
BU of 2mbe by Molmil
Backbone 1H and 15N Chemical Shift Assignments for the first domain of FAT10
分子名称: Ubiquitin D
著者Wang, W, Lim, L, Qin, H.
登録日2013-07-30
公開日2014-08-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Disruption of FAT10-MAD2 binding inhibits tumor progression.
Proc.Natl.Acad.Sci.USA, 111, 2014
7XUR
DownloadVisualize
BU of 7xur by Molmil
The cryo-EM structure of human mini-SNAPc in complex with hU6-1 PSE
分子名称: DNA (35-MER), ZINC ION, snRNA-activating protein complex subunit 1, ...
著者Wang, W, Sun, J.F.
登録日2022-05-19
公開日2022-12-07
実験手法ELECTRON MICROSCOPY (3.49 Å)
主引用文献Structural basis of human SNAPc recognizing proximal sequence element of snRNA promoter.
Nat Commun, 13, 2022
7BPK
DownloadVisualize
BU of 7bpk by Molmil
Zika virus envelope protein mutant bound to mAb
分子名称: Envelope protein, IG c307_light_IGLV1-51_IGLJ2, Z3L1 Heavy chain
著者Dai, L, Qi, J, Gao, G.F.
登録日2020-03-23
公開日2021-03-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Protective Zika vaccines engineered to eliminate enhancement of dengue infection via immunodominance switch.
Nat.Immunol., 22, 2021
7BQ5
DownloadVisualize
BU of 7bq5 by Molmil
ZIKV sE bound to mAb Z6
分子名称: Z6 Light Chain, Z6 heavy chain, envelope protein
著者Dai, L, Qi, J, Gao, G.F.
登録日2020-03-24
公開日2021-03-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Protective Zika vaccines engineered to eliminate enhancement of dengue infection via immunodominance switch.
Nat.Immunol., 22, 2021
4A4D
DownloadVisualize
BU of 4a4d by Molmil
Crystal structure of the N-terminal domain of the Human DEAD-BOX RNA helicase DDX5 (P68)
分子名称: PROBABLE ATP-DEPENDENT RNA HELICASE DDX5
著者Dutta, S, Choi, Y.W, Kotaka, M, Fielding, B.C, Tan, Y.J.
登録日2011-10-11
公開日2012-08-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The Variable N-Terminal Region of Ddx5 Contains Structural Elements and Auto-Inhibits its Interaction with Ns5B of Hepatitis C Virus.
Biochem.J., 446, 2012
6IEC
DownloadVisualize
BU of 6iec by Molmil
Structure of RVFV Gn and human monoclonal antibody R17
分子名称: NSmGnGc, R17 H chain, R17 L chain
著者Wang, Q.H, Wu, Y, Gao, F, Qi, J.X, Gao, G.F.
登録日2018-09-13
公開日2019-04-10
最終更新日2019-07-10
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Neutralization mechanism of human monoclonal antibodies against Rift Valley fever virus.
Nat Microbiol, 4, 2019
6IEA
DownloadVisualize
BU of 6iea by Molmil
Structure of RVFV Gn and human monoclonal antibody R13
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, NSmGnGc, ...
著者Wang, Q.H, Wu, Y, Gao, F, Qi, J.X, Gao, G.F.
登録日2018-09-13
公開日2019-04-10
最終更新日2019-07-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Neutralization mechanism of human monoclonal antibodies against Rift Valley fever virus.
Nat Microbiol, 4, 2019
6IW2
DownloadVisualize
BU of 6iw2 by Molmil
Crystal structure of 5A ScFv in complex with YFV-17D sE in prefusion state
分子名称: Envelope protein E, Heavy chain of monoclonal antibody 5A, Light chain of monoclonal antibody 5A
著者Lu, X.S, Xiao, H.X, Li, S.H, Pang, X.F.
登録日2018-12-04
公開日2019-02-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Double Lock of a Human Neutralizing and Protective Monoclonal Antibody Targeting the Yellow Fever Virus Envelope.
Cell Rep, 26, 2019
6IEK
DownloadVisualize
BU of 6iek by Molmil
Structure of RVFV Gn and human monoclonal antibody R12
分子名称: Heavy chain of Fab R12, Light chain of Fab R12, NSmGnGc
著者Wang, Q.H, Wu, Y, Gao, F, Qi, J.X, Gao, G.F.
登録日2018-09-14
公開日2019-04-10
最終更新日2019-07-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Neutralization mechanism of human monoclonal antibodies against Rift Valley fever virus.
Nat Microbiol, 4, 2019

220760

件を2024-06-05に公開中

PDB statisticsPDBj update infoContact PDBjnumon