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8IHM
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BU of 8ihm by Molmil
Eaf3 CHD domain bound to the nucleosome
分子名称: Chromatin modification-related protein EAF3, DNA (164-MER), DNA (165-MER), ...
著者Zhang, Y, Gang, C.
登録日2023-02-23
公開日2024-03-20
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (3.58 Å)
主引用文献Structural basis for nucleosome binding and catalysis by the yeast Rpd3S/HDAC holoenzyme.
Cell Res., 33, 2023
8IHN
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BU of 8ihn by Molmil
Cryo-EM structure of the Rpd3S core complex
分子名称: CALCIUM ION, Chromatin modification-related protein EAF3, Histone H3, ...
著者Zhang, Y, Gang, C.
登録日2023-02-23
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Structural basis for nucleosome binding and catalysis by the yeast Rpd3S/HDAC holoenzyme.
Cell Res., 33, 2023
8IHT
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BU of 8iht by Molmil
Rpd3S bound to the nucleosome
分子名称: CALCIUM ION, Chromatin modification-related protein EAF3, DNA (164-MER), ...
著者Zhang, Y, Gang, C.
登録日2023-02-23
公開日2024-03-20
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (3.72 Å)
主引用文献Structural basis for nucleosome binding and catalysis by the yeast Rpd3S/HDAC holoenzyme.
Cell Res., 33, 2023
7F3L
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BU of 7f3l by Molmil
Crystal structure of human YBX2 CSD in complex with m5C RNA in space group P62
分子名称: RNA (5'-R(P*CP*AP*UP*(5MC))-3'), Y-box-binding protein 2
著者Zhang, Y, Huang, Y.
登録日2021-06-16
公開日2022-06-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Crystal structure of human YBX2 CSD in complex with m5C RNA in space group P62
To Be Published
7F3K
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BU of 7f3k by Molmil
Crystal structure of human YBX2 CSD in complex with m5C RNA in space group P21212
分子名称: RNA (5'-R(*UP*CP*AP*UP*(5MC)P*U)-3'), SULFATE ION, Y-box-binding protein 2
著者Zhang, Y, Huang, Y.
登録日2021-06-16
公開日2022-06-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Crystal structure of human YBX2 CSD in complex with m5C RNA in space group P21212
To Be Published
7F3J
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BU of 7f3j by Molmil
Crystal structure of human YBX2 CSD in complex with m5C RNA in space group P1
分子名称: RNA (5'-R(*UP*CP*AP*UP*(5MC))-3'), Y-box-binding protein 2
著者Zhang, Y, Huang, Y.
登録日2021-06-16
公開日2022-06-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of human YBX2 CSD in complex with m5C RNA in space group P1
To Be Published
7F3I
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BU of 7f3i by Molmil
Crystal structure of human YBX2 CSD in complex with m5C RNA in space group P212121
分子名称: RNA (5'-R(*GP*UP*(5MC)P*CP*(5MC))-3'), Y-box-binding protein 2
著者Zhang, Y, Huang, Y.
登録日2021-06-16
公開日2022-06-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Crystal structure of human YBX2 CSD in complex with m5C RNA in space group P212121
To Be Published
7WHM
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BU of 7whm by Molmil
Closed spike of Bombyx mori cytoplasmic polyhedrosis virus
分子名称: PPPDE domain-containing protein
著者Zhang, Y, Cui, Y, Sun, J, Zhou, Z.H.
登録日2021-12-31
公開日2022-02-02
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Multiple conformations of trimeric spikes visualized on a non-enveloped virus.
Nat Commun, 13, 2022
7WHN
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BU of 7whn by Molmil
Opened spike of Bombyx mori cytoplasmic polyhedrosis virus
分子名称: PPPDE domain-containing protein
著者Zhang, Y, Cui, Y, Sun, J, Zhou, Z.H.
登録日2021-12-31
公開日2022-02-02
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Multiple conformations of trimeric spikes visualized on a non-enveloped virus.
Nat Commun, 13, 2022
7WHP
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BU of 7whp by Molmil
Pentameric turret of Bombyx mori cytoplasmic polyhedrosis virus after spike detaches.
分子名称: ADENOSINE-5'-TRIPHOSPHATE, S-ADENOSYLMETHIONINE, Structural protein VP3
著者Zhang, Y, Cui, Y, Sun, J, Zhou, Z.H.
登録日2021-12-31
公開日2022-02-02
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Multiple conformations of trimeric spikes visualized on a non-enveloped virus.
Nat Commun, 13, 2022
7WF9
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BU of 7wf9 by Molmil
Crystal structure of mouse SNX25 RGS domain in space group P41212
分子名称: Sorting nexin-25
著者Zhang, Y, Xu, J, Liu, J.
登録日2021-12-26
公開日2022-10-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural Studies Reveal Unique Non-canonical Regulators of G Protein Signaling Homology (RH) Domains in Sorting Nexins.
J.Mol.Biol., 434, 2022
7WF8
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BU of 7wf8 by Molmil
Crystal structure of mouse SNX25 RGS domain in space group P212121
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Zhang, Y, Xu, J, Liu, J.
登録日2021-12-26
公開日2022-10-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural Studies Reveal Unique Non-canonical Regulators of G Protein Signaling Homology (RH) Domains in Sorting Nexins.
J.Mol.Biol., 434, 2022
7D6E
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BU of 7d6e by Molmil
Structural insights into membrane remodeling by SNX1
分子名称: Sorting nexin-1
著者Zhang, Y, Pang, X, Sun, F.
登録日2020-09-30
公開日2021-03-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Structural insights into membrane remodeling by SNX1.
Proc.Natl.Acad.Sci.USA, 118, 2021
7D6D
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BU of 7d6d by Molmil
Structural insights into membrane remodeling by SNX1
分子名称: Sorting nexin-1
著者Zhang, Y, Pang, X, Sun, F.
登録日2020-09-30
公開日2021-03-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Structural insights into membrane remodeling by SNX1.
Proc.Natl.Acad.Sci.USA, 118, 2021
7E7S
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BU of 7e7s by Molmil
WT transporter state1
分子名称: CALCIUM ION, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2
著者Zhang, Y, Watanabe, S, Tsutsumi, A, Inaba, K.
登録日2021-02-27
公開日2021-09-08
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM analysis provides new mechanistic insight into ATP binding to Ca 2+ -ATPase SERCA2b.
Embo J., 40, 2021
7VP1
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BU of 7vp1 by Molmil
Structure of a transcription factor and DNA complex
分子名称: DNA (5'-D(*AP*TP*GP*TP*GP*GP*TP*CP*CP*CP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*GP*GP*GP*AP*CP*CP*AP*CP*A)-3'), Transcription factor TCP10
著者Zhang, Y, Xu, Y.P, Wang, B, Su, X.D.
登録日2021-10-15
公開日2022-10-19
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.902 Å)
主引用文献Structural basis for DNA recognition by TCP transcription factors
To Be Published
7VP7
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BU of 7vp7 by Molmil
Structure of a transcription factor and DNA complex
分子名称: DNA (5'-D(P*AP*GP*GP*CP*CP*CP*CP*CP*CP*CP*AP*T)-3'), Transcription factor TCP10
著者Zhang, Y, Xu, Y.P, Wang, B, Su, X.D.
登録日2021-10-15
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.653 Å)
主引用文献Structural basis for DNA recognition by TCP transcription factors
To Be Published
7VP2
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BU of 7vp2 by Molmil
Structure of a transcription factor and DNA complex
分子名称: DNA (5'-D(*AP*TP*GP*TP*GP*GP*TP*CP*CP*CP*CP*AP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*TP*GP*GP*GP*GP*AP*CP*CP*AP*CP*A)-3'), Transcription factor TCP10
著者Zhang, Y, Xu, Y.P, Wang, B, Su, X.D.
登録日2021-10-15
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural basis for DNA recognition by TCP transcription factors
To Be Published
7VP4
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BU of 7vp4 by Molmil
Structure of a transcription factor and DNA complex
分子名称: DNA (5'-D(*AP*TP*GP*TP*GP*GP*TP*CP*CP*CP*CP*AP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*TP*GP*GP*GP*GP*AP*CP*CP*AP*CP*A)-3'), Transcription factor TCP10
著者Zhang, Y, Xu, Y.P, Wang, B, Su, X.D.
登録日2021-10-15
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.04 Å)
主引用文献Structural basis for DNA recognition by TCP transcription factors
To Be Published
7VP6
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BU of 7vp6 by Molmil
Structure of a transcription factor and DNA complex
分子名称: Transcription factor TCP15
著者Zhang, Y, Xu, Y.P, Wang, B, Su, X.D.
登録日2021-10-15
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Structural basis for DNA recognition by TCP transcription factors
To Be Published
7VP5
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BU of 7vp5 by Molmil
Structure of a transcription factor and DNA complex
分子名称: DNA (5'-D(*AP*TP*GP*TP*GP*GP*TP*CP*CP*CP*GP*TP*GP*T)-3'), Transcription factor TCP10
著者Zhang, Y, Xu, Y.P, Wang, B, Su, X.D.
登録日2021-10-15
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.992 Å)
主引用文献Structural basis for DNA recognition by TCP transcription factors
To Be Published
7VP3
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BU of 7vp3 by Molmil
Structure of a transcription factor and DNA complex
分子名称: DNA (5'-D(*AP*TP*GP*TP*GP*GP*GP*TP*CP*CP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*GP*GP*AP*CP*CP*CP*AP*C)-3'), Transcription factor TCP15
著者Zhang, Y, Xu, Y.P, Wang, B, Su, X.D.
登録日2021-10-15
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.003 Å)
主引用文献Structural basis for DNA recognition by TCP transcription factors
To Be Published
7XH3
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BU of 7xh3 by Molmil
Dimeric G-quadruplex DNA Formed in the Proximal Promoter of VEGFR-2
分子名称: DNA (5'-D(*CP*CP*GP*GP*GP*TP*AP*CP*CP*CP*GP*G)-3')
著者Zhang, Y, Lan, W, Wang, C, Cao, C.
登録日2022-04-07
公開日2023-02-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Dimeric G-quadruplex DNA Structure in the Proximal Promoter of VEGFR-2 Reveals a New Drug Target to Inhibit Tumor Angiogenesis.
Chin.J.Chem., 40, 2022
7XFV
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BU of 7xfv by Molmil
Dimeric G-quadruplex DNA Formed in the Proximal Promoter of VEGFR-2
分子名称: DNA (5'-D(*AP*TP*GP*AP*GP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3')
著者Zhang, Y, Lan, W, Wang, C, Cao, C.
登録日2022-04-02
公開日2023-03-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Dimeric G-quadruplex DNA Structure in the Proximal Promoter of VEGFR-2 Reveals a New Drug Target to Inhibit Tumor Angiogenesis.
Chin.J.Chem., 40, 2023
4XV2
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BU of 4xv2 by Molmil
B-Raf Kinase V600E oncogenic mutant in complex with Dabrafenib
分子名称: Dabrafenib, Serine/threonine-protein kinase B-raf
著者zhang, Y, zhang, c.
登録日2015-01-26
公開日2015-10-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献RAF inhibitors that evade paradoxical MAPK pathway activation.
Nature, 526, 2015

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件を2024-11-06に公開中

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