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6JZ8
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BU of 6jz8 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro 1,5-lactone
Descriptor: (2S,3S,4S,5R)-3,4,5-trihydroxy-6-oxo-oxane-2-carboxylic acid, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.583 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ3
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BU of 6jz3 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with uronic deoxynojirimycin
Descriptor: (2~{S},3~{R},4~{R},5~{S})-3,4,5-tris(oxidanyl)piperidine-2-carboxylic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-05-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
5YWK
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BU of 5ywk by Molmil
Crystal structure of Arabidopsis thaliana HPPD complexed with Benquitrione-Methyl
Descriptor: 1,5-dimethyl-3-(2-methylphenyl)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Yang, W.C, Lin, H.Y.
Deposit date:2017-11-29
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.804 Å)
Cite:Structure-Guided Discovery of Silicon-Containing Subnanomolar Inhibitor of Hydroxyphenylpyruvate Dioxygenase as a Potential Herbicide.
J.Agric.Food Chem., 69, 2021
6JZ4
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BU of 6jz4 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro-d-lactam
Descriptor: (2S,3R,4S,5R)-3,4,5-trihydroxy-6-oxopiperidine-2-carboxylic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-03
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.712 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
7RK3
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BU of 7rk3 by Molmil
Crystal structure of human N-myristoyltransferase 1 fragment (residues 109-496) bound to diacylated human Arf6 octapeptide and Coenzyme A
Descriptor: 4'-diphospho pantetheine, ADP-ribosylation factor 6, Glycylpeptide N-tetradecanoyltransferase 1, ...
Authors:Fenwick, M.K, Lin, H.
Deposit date:2021-07-21
Release date:2022-07-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of human N-myristoyltransferase 1 fragment (residues 109-496) bound to diacylated human Arf6 octapeptide and Coenzyme A
To Be Published
6JZ7
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BU of 6jz7 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with N1-substituted uronic isofagomine
Descriptor: (3~{S},4~{R},5~{R})-4,5-bis(oxidanyl)-1-propyl-piperidine-3-carboxylic acid, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
5YWH
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BU of 5ywh by Molmil
Crystal structure of Arabidopsis thaliana HPPD complexed with Y13508
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, FE (III) ION, [1,3-diethyl-2,2-bis(oxidanylidene)-2$l^{6},1,3-benzothiadiazol-5-yl]-(1-methyl-5-oxidanyl-pyrazol-4-yl)methanone
Authors:Yang, W.C, Lin, H.Y.
Deposit date:2017-11-29
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Crystal structure of Arabidopsis thaliana HPPD complexed with Y13508
To be published
6JZ6
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BU of 6jz6 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with C6-substituted uronic isofagomine
Descriptor: (2~{S},3~{S},4~{R},5~{R})-4,5-bis(oxidanyl)-2-propyl-piperidine-3-carboxylic acid, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.605 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ1
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BU of 6jz1 by Molmil
Apo structure of b-glucuronidase from Ruminococcus gnavus at 1.7 Angstrom resolution
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Beta-glucuronidase
Authors:Dashnyam, P, Lin, H.Y.
Deposit date:2019-04-30
Release date:2020-06-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
8IM2
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BU of 8im2 by Molmil
Crystal structure of human HPPD complexed with NTBC
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-{HYDROXY[2-NITRO-4-(TRIFLUOROMETHYL)PHENYL]METHYLENE}CYCLOHEXANE-1,3-DIONE, 4-hydroxyphenylpyruvate dioxygenase, ...
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-03-05
Release date:2023-10-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structure-based discovery of pyrazole-benzothiadiazole hybrid as human HPPD inhibitors.
Structure, 31, 2023
5GKB
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BU of 5gkb by Molmil
Crystal Structure of Fatty Acid-Binding Protein in Brain Tissue of Drosophila melanogaster without citrate inside
Descriptor: Fatty acid bindin protein, isoform B
Authors:Cheng, Y.-Y, Huang, Y.-F, Lin, H.-H, Chang, W.W, Lyu, P.-C.
Deposit date:2016-07-04
Release date:2017-07-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:The ligand-mediated affinity of brain-type fatty acid-binding protein for membranes determines the directionality of lipophilic cargo transport.
Biochim Biophys Acta Mol Cell Biol Lipids, 1864, 2019
5GGE
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BU of 5gge by Molmil
Fatty Acid-Binding Protein in Brain Tissue of Drosophila melanogaster
Descriptor: CITRIC ACID, Fatty acid bindin protein, isoform B
Authors:Cheng, Y.-Y, Huang, Y.-F, Lin, H.-H, Chang, W.W, Lyu, P.-C.
Deposit date:2016-06-15
Release date:2017-06-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.861 Å)
Cite:The ligand-mediated affinity of brain-type fatty acid-binding protein for membranes determines the directionality of lipophilic cargo transport.
Biochim Biophys Acta Mol Cell Biol Lipids, 1864, 2019
4MT6
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BU of 4mt6 by Molmil
Crystal structure of closed inactive collybistin
Descriptor: Rho guanine nucleotide exchange factor 9
Authors:Schneeberger, D, Schindelin, H.
Deposit date:2013-09-19
Release date:2014-08-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (5.501 Å)
Cite:A conformational switch in collybistin determines the differentiation of inhibitory postsynapses.
Embo J., 33, 2014
6ENT
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BU of 6ent by Molmil
Structure of the rat RKIP variant delta143-146
Descriptor: CHLORIDE ION, Phosphatidylethanolamine-binding protein 1, ZINC ION
Authors:Koelmel, W, Hirschbeck, M, Schindelin, H, Lorenz, K, Kisker, C.
Deposit date:2017-10-06
Release date:2017-12-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Conserved salt-bridge competition triggered by phosphorylation regulates the protein interactome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8HZA
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BU of 8hza by Molmil
Crystal structure of AtHPPD-YH20326 complex
Descriptor: 1,4-dimethyl-3-(oxan-4-ylmethyl)-5-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-benzimidazol-2-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-08
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Crystal structure of AtHPPD-YH20326 complex
To Be Published
8HXH
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BU of 8hxh by Molmil
Crystal structure of AtHPPD-Y18024 complex
Descriptor: 1,5-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-propyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-04
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.992 Å)
Cite:Crystal structure of AtHPPD-Y18024 complex
To Be Published
8HYS
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BU of 8hys by Molmil
Crystal structure of AtHPPD-Y19802 complex
Descriptor: 1-methyl-3-[2-methyl-6-methylsulfonyl-3-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-phenyl]-6-(trifluoromethyl)pyrimidine-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-07
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of AtHPPD-Y19802 complex
To Be Published
8HWR
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BU of 8hwr by Molmil
Crystal structure of AtHPPD-Y191193 complex
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, 6-chloranyl-3-cyclopentyl-1-methyl-7-(2-oxidanyl-6-oxidanylidene-cyclohexa-1,3-dien-1-yl)carbonyl-quinazoline-2,4-dione, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-02
Release date:2023-12-20
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Crystal structure of AtHPPD-Y191193 complex
To Be Published
8HYP
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BU of 8hyp by Molmil
Crystal structure of AtHPPD-Y18400 complex
Descriptor: 3-[(4-fluorophenyl)methyl]-1,5-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-07
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.749 Å)
Cite:Crystal structure of AtHPPD-Y18400 complex
To Be Published
8HZ7
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BU of 8hz7 by Molmil
Crystal structure of AtHPPD-Y181135 complex
Descriptor: 3-butyl-5-methyl-6-[(2-methyl-3-oxidanylidene-1H-pyrazol-4-yl)carbonyl]-1,2,3-benzotriazin-4-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-08
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Crystal structure of AtHPPD-Y181135 complex
To Be Published
8I0G
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BU of 8i0g by Molmil
Crystal structure of AtHPPD-Y19543 complex
Descriptor: 3-[(4-fluorophenyl)methyl]-5-methyl-6-[(2-methyl-3-oxidanylidene-1H-pyrazol-4-yl)carbonyl]-1,2,3-benzotriazin-4-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-10
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.992 Å)
Cite:Crystal structure of AtHPPD-Y19543 complex
To Be Published
8I36
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BU of 8i36 by Molmil
Crystal structure of AtHPPD-Y18980 complex
Descriptor: 1,5-dimethyl-3-(naphthalen-1-ylmethyl)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-16
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.887 Å)
Cite:Crystal structure of AtHPPD-Y18980 complex
To Be Published
8I2P
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BU of 8i2p by Molmil
Crystal structure of AtHPPD-Y19060 complex
Descriptor: 3-(cyclopropylmethyl)-6-[(5-cyclopropyl-2-methyl-3-oxidanylidene-1H-pyrazol-4-yl)carbonyl]-1,5-dimethyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-14
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.797 Å)
Cite:Crystal structure of AtHPPD-Y19060 complex
To Be Published
8HXF
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BU of 8hxf by Molmil
Crystal structure of AtHPPD-Y181188 complex
Descriptor: 4-hydroxyphenylpyruvate dioxygenase, 6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-4-[[4-(trifluoromethyl)phenyl]methyl]-1,4-benzothiazin-3-one, COBALT (II) ION
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-04
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.697 Å)
Cite:Crystal structure of AtHPPD-Y181188 complex
To Be Published
8HX4
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BU of 8hx4 by Molmil
Crystal structure of AtHPPD-Y18549 complex
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-hydroxyphenylpyruvate dioxygenase, 6-[(R)-[(2R,6R)-2,6-bis(oxidanyl)cyclohexyl]-oxidanyl-methyl]-3-(4,6-dimethylpyrimidin-2-yl)-1,5-dimethyl-quinazoline-2,4-dione, ...
Authors:Dong, J, Lin, H.-Y, Yang, G.-F.
Deposit date:2023-01-03
Release date:2023-12-20
Method:X-RAY DIFFRACTION (1.896 Å)
Cite:Crystal structure of AtHPPD-Y18549 complex
To Be Published

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PDB entries from 2024-08-28

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