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7WI1
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BU of 7wi1 by Molmil
The mutant variant of PNGM-1, H93 was substituuted for alanine to study metal coordination
Descriptor: Metallo-beta-lactamase PNGM-1, ZINC ION
Authors:Park, Y.S, Kang, L.W, Lee, J.H.
Deposit date:2022-01-01
Release date:2023-01-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants.
Int J Mol Sci, 21, 2020
1MVE
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BU of 1mve by Molmil
Crystal structure of a natural circularly-permutated jellyroll protein: 1,3-1,4-beta-D-glucanase from Fibrobacter succinogenes
Descriptor: CALCIUM ION, Truncated 1,3-1,4-beta-D-glucanase
Authors:Tsai, L.-C, Shyur, L.-F, Lee, S.-H, Lin, S.-S, Yuan, H.S.
Deposit date:2002-09-25
Release date:2003-07-15
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of a Natural Circularly Permuted Jellyroll Protein: 1,3-1,4-beta-D-Glucanase from Fibrobacter succinogenes.
J.Mol.Biol., 330, 2003
7V6E
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BU of 7v6e by Molmil
DREP3
Descriptor: DNAation factor-related protein 3, isoform A
Authors:Lee, S.Y, Park, H.H.
Deposit date:2021-08-20
Release date:2022-08-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Helical filament structure of the DREP3 CIDE domain reveals a unified mechanism of CIDE-domain assembly.
Acta Crystallogr D Struct Biol, 77, 2021
7BRA
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BU of 7bra by Molmil
Bacillus subtilis IRG1
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Bacillus subtilis IRG1, SULFATE ION
Authors:Park, H.H, Chun, H.L.
Deposit date:2020-03-27
Release date:2021-02-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.785 Å)
Cite:Enzymatic reaction mechanism of cis-aconitate decarboxylase based on the crystal structure of IRG1 from Bacillus subtilis.
Sci Rep, 10, 2020
2GFW
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BU of 2gfw by Molmil
Structure of wild type E. coli FabF (KASII)
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 2
Authors:Soisson, S.M, Parthasarathy, G.
Deposit date:2006-03-23
Release date:2006-05-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Platensimycin is a selective FabF inhibitor with potent antibiotic properties.
Nature, 441, 2006
2GFY
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BU of 2gfy by Molmil
Structure of E. coli FabF(K335A) mutant with covalently linked dodecanoic acid
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 2, LAURIC ACID
Authors:Soisson, S.M, Parthasarathy, G.
Deposit date:2006-03-23
Release date:2006-05-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Platensimycin is a selective FabF inhibitor with potent antibiotic properties.
Nature, 441, 2006
2GFX
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BU of 2gfx by Molmil
Structure of E. coli FabF(C163Q) in complex with Platensimycin
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 2, PLATENSIMYCIN
Authors:Soisson, S.M, Parthasarathy, G.
Deposit date:2006-03-23
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Platensimycin is a selective FabF inhibitor with potent antibiotic properties.
Nature, 441, 2006
2GFV
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BU of 2gfv by Molmil
Structure of E. coli FabF (KASII) C163Q mutant
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 2
Authors:Soisson, S.M, Parthasarathy, G.
Deposit date:2006-03-23
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Platensimycin is a selective FabF inhibitor with potent antibiotic properties.
Nature, 441, 2006
7FD4
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BU of 7fd4 by Molmil
A complete three-dimensional structure of the Lon protease translocating a protein substrate (conformation 1)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Alpha-S1-casein, Lon protease, ...
Authors:Li, S, Hsieh, K, Kuo, C, Lee, S, Pintilie, G, Zhang, K, Chang, C.
Deposit date:2021-07-16
Release date:2021-11-03
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Complete three-dimensional structures of the Lon protease translocating a protein substrate.
Sci Adv, 7, 2021
7FD5
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BU of 7fd5 by Molmil
A complete three-dimensional structure of the Lon protease translocating a protein substrate (conformation 2)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Alpha-S1-casein, Lon protease, ...
Authors:Li, S, Hsieh, K, Kuo, C, Lee, S, Pintilie, G, Zhang, K, Chang, C.
Deposit date:2021-07-16
Release date:2021-11-03
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Complete three-dimensional structures of the Lon protease translocating a protein substrate.
Sci Adv, 7, 2021
5JJA
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BU of 5jja by Molmil
Crystal structure of a PP2A B56gamma/BubR1 complex
Descriptor: Mitotic checkpoint serine/threonine-protein kinase BUB1 beta, Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform
Authors:Wang, Z, Wang, J, Rao, Z, Xu, W.
Deposit date:2016-04-22
Release date:2016-07-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of a PP2A B56-BubR1 complex and its implications for PP2A substrate recruitment and localization.
Protein Cell, 7, 2016
3BWE
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BU of 3bwe by Molmil
Crystal structure of aggregated form of DJ1
Descriptor: PHOSPHATE ION, Protein DJ-1
Authors:Cha, S.S.
Deposit date:2008-01-09
Release date:2008-10-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of filamentous aggregates of human DJ-1 formed in an inorganic phosphate-dependent manner.
J.Biol.Chem., 283, 2008
3BP3
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BU of 3bp3 by Molmil
Crystal structure of EIIB
Descriptor: Glucose-specific phosphotransferase enzyme IIB component, SULFATE ION
Authors:Cha, S.S, Jung, H.I, An, Y.J.
Deposit date:2007-12-18
Release date:2008-11-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Analyses of Mlc-IIBGlc interaction and a plausible molecular mechanism of Mlc inactivation by membrane sequestration.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3BP8
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BU of 3bp8 by Molmil
Crystal structure of Mlc/EIIB complex
Descriptor: ACETATE ION, PTS system glucose-specific EIICB component, Putative NAGC-like transcriptional regulator, ...
Authors:An, Y.J, Jung, H.I, Cha, S.S.
Deposit date:2007-12-18
Release date:2008-05-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Analyses of Mlc-IIBGlc interaction and a plausible molecular mechanism of Mlc inactivation by membrane sequestration
Proc.Natl.Acad.Sci.Usa, 105, 2008
7X7H
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BU of 7x7h by Molmil
Crystal structure of Fructose regulator/Histidine phosphocarrier protein complex from Vibrio cholerae
Descriptor: CALCIUM ION, Catabolite repressor/activator, HPr family phosphocarrier protein
Authors:Kim, M.-K, Zhang, J, Yoon, C.-K, Seok, Y.-J.
Deposit date:2022-03-09
Release date:2023-03-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:HPr prevents FruR-mediated facilitation of RNA polymerase binding to the fru promoter in Vibrio cholerae.
Nucleic Acids Res., 51, 2023
5DMX
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BU of 5dmx by Molmil
Crystal structure of D-alanine-D-alanine ligase from Acinetobacter baumannii, space group p212121
Descriptor: D-alanine--D-alanine ligase
Authors:Huynh, K.H, Hong, M.K, Kang, L.W.
Deposit date:2015-09-09
Release date:2016-08-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:The crystal structure of the D-alanine-D-alanine ligase from Acinetobacter baumannii suggests a flexible conformational change in the central domain before nucleotide binding
J. Microbiol., 53, 2015
7BZ4
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BU of 7bz4 by Molmil
The mutant variant of PNGM-1. H279 was substituted for alanine to study metal coordination.
Descriptor: Metallo-beta-lactamase PNGM-1, ZINC ION
Authors:Park, Y.S, Kang, L.W, Lee, J.H.
Deposit date:2020-04-26
Release date:2021-04-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants.
Int J Mol Sci, 21, 2020
7BYQ
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BU of 7byq by Molmil
The mutant variant of PNGM-1. H279A was substituted for alanine to study metal coordination.
Descriptor: Metallo-beta-lactamase PNGM-1, ZINC ION
Authors:Park, Y.S, Kang, L.W, Lee, J.H.
Deposit date:2020-04-24
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants.
Int J Mol Sci, 21, 2020
3K9K
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BU of 3k9k by Molmil
Transposase domain of Metnase
Descriptor: Histone-lysine N-methyltransferase SETMAR
Authors:Goodwin, K.D, He, H, Imasaki, T, Lee, S.-H, Georgiadis, M.M.
Deposit date:2009-10-15
Release date:2010-07-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of the human Hsmar1-derived transposase domain in the DNA repair enzyme Metnase.
Biochemistry, 49, 2010
7DHA
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BU of 7dha by Molmil
crystal structure of CD38 in complex with daratumumab
Descriptor: ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1, Heavy Chain, Light chain
Authors:Lee, H.T, Heo, Y.S.
Deposit date:2020-11-13
Release date:2021-09-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of CD38 in complex with daratumumab, a first-in-class anti-CD38 antibody drug for treating multiple myeloma.
Biochem.Biophys.Res.Commun., 536, 2021
3K9J
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BU of 3k9j by Molmil
Transposase domain of Metnase
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Histone-lysine N-methyltransferase SETMAR
Authors:Goodwin, K.D, He, H, Imasaki, T, Lee, S.-H, Georgiadis, M.M.
Deposit date:2009-10-15
Release date:2010-07-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:Crystal structure of the human Hsmar1-derived transposase domain in the DNA repair enzyme Metnase.
Biochemistry, 49, 2010
7BZ1
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BU of 7bz1 by Molmil
The mutant variant of PNGM-1. H96 was substituted for alanine to study metal coordination.
Descriptor: Metallo-beta-lactamase PNGM-1, ZINC ION
Authors:Park, Y.S, Kang, L.W, Lee, J.H.
Deposit date:2020-04-26
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants.
Int J Mol Sci, 21, 2020
7BZI
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BU of 7bzi by Molmil
The mutant variant of PNGM-1. H91 was substituted for alanine to study metal coordination.
Descriptor: Metallo-beta-lactamase PNGM-1, ZINC ION
Authors:Park, Y.S, Kang, L.W, Lee, J.H.
Deposit date:2020-04-28
Release date:2021-04-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants.
Int J Mol Sci, 21, 2020
7BZ3
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BU of 7bz3 by Molmil
The mutant variant of PNGM-1. H257 was substituted for alanine to study substrate binding.
Descriptor: Metallo-beta-lactamase PNGM-1, ZINC ION
Authors:Park, Y.S, Kang, L.W, Lee, J.H.
Deposit date:2020-04-26
Release date:2021-04-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants.
Int J Mol Sci, 21, 2020
3L6Y
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BU of 3l6y by Molmil
Crystal structure of p120 catenin in complex with E-cadherin
Descriptor: Catenin delta-1, E-cadherin
Authors:Ishiyama, N, Lee, S.-H, Liu, S, Li, G.-Y, Smith, M.J, Reichardt, L.F, Ikura, M.
Deposit date:2009-12-27
Release date:2010-04-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Dynamic and static interactions between p120 catenin and E-cadherin regulate the stability of cell-cell adhesion.
Cell(Cambridge,Mass.), 141, 2010

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PDB entries from 2024-10-16

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