Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4RPN
DownloadVisualize
BU of 4rpn by Molmil
PcpR inducer binding domain complex with pentachlorophenol
Descriptor: PCP degradation transcriptional activation protein, PENTACHLOROPHENOL
Authors:Hayes, R.P, Moural, T.W, Lewis, K.M, Onofrei, D, Xun, L, Kang, C.
Deposit date:2014-10-30
Release date:2014-11-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.272 Å)
Cite:Structures of the Inducer-Binding Domain of Pentachlorophenol-Degrading Gene Regulator PcpR from Sphingobium chlorophenolicum.
Int J Mol Sci, 15, 2014
4RS7
DownloadVisualize
BU of 4rs7 by Molmil
Structure of pNOB8 ParB-C
Descriptor: ParB-C
Authors:Schumacher, M.A, Lee, J, Chinnam, N.B, Barilla, D.
Deposit date:2014-11-07
Release date:2015-09-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of archaeal DNA segregation machinery reveal bacterial and eukaryotic linkages.
Science, 349, 2015
4RVI
DownloadVisualize
BU of 4rvi by Molmil
Crystal structure of multidrug-resistant clinical isolate A02 HIV-1 protease in complex with non-peptidic inhibitor, GRL0519
Descriptor: (3R,3aS,3bR,6aS,7aS)-octahydrodifuro[2,3-b:3',2'-d]furan-3-yl [(1S,2R)-1-benzyl-2-hydroxy-3-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}propyl]carbamate, HIV-1 protease
Authors:Yedidi, R.S, Garimella, H, Kaufman, J.D, Das, D, Wingfield, P.T, Ghosh, A.K, Mitsuya, H.
Deposit date:2014-11-26
Release date:2016-05-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Enhanced antiviral activity by the P2-tris-tetrahydrofuran moiety of GRL-0519, a novel nonpeptidic HIV-1 protease inhibitor (PI), against multi-PI-resistant and highly darunavir-resistant strains of HIV-1
To be Published
4PVE
DownloadVisualize
BU of 4pve by Molmil
Wild-type Phl p 4.0202, a glucose dehydrogenase
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, MALONATE ION, ...
Authors:Zafred, D, Teufelberger, A, Keller, W, Macheroux, P.
Deposit date:2014-03-17
Release date:2014-04-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Rationally engineered flavin-dependent oxidase reveals steric control of dioxygen reduction.
Febs J., 282, 2015
4PYI
DownloadVisualize
BU of 4pyi by Molmil
human apo COMT
Descriptor: Catechol O-methyltransferase, SODIUM ION
Authors:Ehler, A, Benz, J, Schlatter, D, Rudolph, M.G.
Deposit date:2014-03-27
Release date:2014-06-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Mapping the conformational space accessible to catechol-O-methyltransferase.
Acta Crystallogr.,Sect.D, 70, 2014
4QIL
DownloadVisualize
BU of 4qil by Molmil
Crystal structure of the ROQ domain of human Roquin in complex with the Hmg19 stem-loop RNA
Descriptor: 5'-R(*CP*UP*CP*CP*CP*UP*UP*CP*UP*GP*UP*GP*AP*AP*GP*GP*GP*GP*A)-3', CALCIUM ION, Roquin-1
Authors:Tan, D, Tong, L.
Deposit date:2014-05-31
Release date:2014-07-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The ROQ domain of Roquin recognizes mRNA constitutive-decay element and double-stranded RNA.
Nat.Struct.Mol.Biol., 21, 2014
4QD7
DownloadVisualize
BU of 4qd7 by Molmil
Crystal structure of Thioesterase PA1618 from Pseudomonas aeruginosa
Descriptor: Thioesterase PA1618
Authors:Ji, T, Allen, K.N, Dunaway-Mariano, D.
Deposit date:2014-05-13
Release date:2015-05-13
Method:X-RAY DIFFRACTION (1.765 Å)
Cite:Design and Use of an Ester Analog of CoA to Trap the Michaelis Complex in a Thioesterase
To be Published
4QOS
DownloadVisualize
BU of 4qos by Molmil
CRYSTAL STRUCTURE OF PSPF(1-265) E108Q MUTANT bound to ADP
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Darbari, V.C, Lawton, E, Lu, D, Burrows, P.C, Wiesler, S, Joly, N, Zhang, N, Zhang, X, Buck, M.
Deposit date:2014-06-20
Release date:2014-08-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Molecular basis of nucleotide-dependent substrate engagement and remodeling by an AAA+ activator.
Nucleic Acids Res., 42, 2014
4QI0
DownloadVisualize
BU of 4qi0 by Molmil
X-ray structure of the ROQ domain from murine Roquin-1
Descriptor: 1,2-ETHANEDIOL, Roquin-1
Authors:Janowski, R, Schlundt, A, Sattler, M, Niessing, D.
Deposit date:2014-05-30
Release date:2014-07-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural basis for RNA recognition in roquin-mediated post-transcriptional gene regulation.
Nat.Struct.Mol.Biol., 21, 2014
4QIK
DownloadVisualize
BU of 4qik by Molmil
Crystal structure of the ROQ domain of human Roquin in complex with the TNF23 RNA duplex
Descriptor: 5'-R(*AP*C*AP*UP*GP*UP*UP*UP*UP*CP*UP*GP*UP*GP*AP*AP*AP*AP*CP*GP*GP*AP*G)-3', CHLORIDE ION, GLYCEROL, ...
Authors:Tan, D, Tong, L.
Deposit date:2014-05-31
Release date:2014-07-16
Last modified:2014-08-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The ROQ domain of Roquin recognizes mRNA constitutive-decay element and double-stranded RNA.
Nat.Struct.Mol.Biol., 21, 2014
4QTP
DownloadVisualize
BU of 4qtp by Molmil
Crystal Structure of an Anti-sigma Factor Antagonist from Mycobacterium paratuberculosis
Descriptor: 1,2-ETHANEDIOL, Anti-sigma factor antagonist, CITRIC ACID, ...
Authors:Dranow, D.M, Clifton, M.C, Edwards, T.E, Lorimer, D, Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2014-07-08
Release date:2014-07-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of an Anti-sigma Factor Antagonist from Mycobacterium paratuberculosis
TO BE PUBLISHED
4QPZ
DownloadVisualize
BU of 4qpz by Molmil
Crystal structure of the formolase FLS_v2 in space group P 21
Descriptor: Formolase, MAGNESIUM ION, THIAMINE DIPHOSPHATE
Authors:Shen, B.W, Siegel, J.B, Stoddard, B.L, Baker, D.
Deposit date:2014-06-25
Release date:2015-03-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Computational protein design enables a novel one-carbon assimilation pathway.
Proc.Natl.Acad.Sci.USA, 112, 2015
4QYY
DownloadVisualize
BU of 4qyy by Molmil
Discovery of Novel, Dual Mechanism ERK Inhibitors by Affinity Selection Screening of an Inactive Kinase State
Descriptor: (3R)-1-{2-[4-(4-acetylphenyl)piperazin-1-yl]-2-oxoethyl}-N-(3-chloro-4-hydroxyphenyl)pyrrolidine-3-carboxamide, Mitogen-activated protein kinase 1, SULFATE ION
Authors:Deng, Y, Shipps, G.W, Cooper, A, English, J.M, Annis, D.A, Carr, D, Nan, Y, Wang, T, Zhu, Y.H, Chuang, C, Dayananth, P, Hruza, A.W, Xiao, L, Jin, W, Kirschmeier, P, Windsor, W.T, Samatar, A.A.
Deposit date:2014-07-26
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Discovery of Novel, Dual Mechanism ERK Inhibitors by Affinity Selection Screening of an Inactive Kinase.
J.Med.Chem., 57, 2014
4S02
DownloadVisualize
BU of 4s02 by Molmil
Biphenylalanine modified threonyl-tRNA synthetase from Pyrococcus abyssi: I11BIF, F42W, Y79A, and F123Y mutant
Descriptor: DI(HYDROXYETHYL)ETHER, Threonine--tRNA ligase
Authors:Pearson, A.D, Mills, J.H, Song, Y, Nasertorabi, F, Han, G.W, Baker, D, Stevens, R.C, Schultz, P.G.
Deposit date:2014-12-30
Release date:2015-03-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Transition states. Trapping a transition state in a computationally designed protein bottle.
Science, 347, 2015
4RXW
DownloadVisualize
BU of 4rxw by Molmil
Crystal Structure of the cobalt human insulin derivative
Descriptor: COBALT (II) ION, Insulin A chain, Insulin B chain
Authors:Prugovecki, B, Ivetic, N, Matkovic-Calogovic, D.
Deposit date:2014-12-12
Release date:2015-01-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystal Structure of the cobalt human insulin derivative
TO BE PUBLISHED
4R1Y
DownloadVisualize
BU of 4r1y by Molmil
Identification and optimization of pyridazinones as potent and selective c-Met kinase inhibitor
Descriptor: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 3-(diethylamino)propyl (3-{[5-(3,4-dimethoxyphenyl)-2-oxo-2H-1,3,4-thiadiazin-3(6H)-yl]methyl}phenyl)carbamate, Hepatocyte growth factor receptor
Authors:Blaukat, A, Bladt, F, Friese-Hamim, M, Knuehl, C, Fittschen, C, Graedler, U, Meyring, M, Dorsch, D, Stieber, F, Schadt, O.
Deposit date:2014-08-08
Release date:2015-03-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification and optimization of pyridazinones as potent and selective c-Met kinase inhibitors.
Bioorg.Med.Chem.Lett., 25, 2015
4QYX
DownloadVisualize
BU of 4qyx by Molmil
Crystal structure of YDR533Cp
Descriptor: Probable chaperone protein HSP31
Authors:Wilson, M.A, Amour, S.T, Collins, J.L, Ringe, D, Petsko, G.A.
Deposit date:2014-07-26
Release date:2014-08-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:The 1.8-A resolution crystal structure of YDR533Cp from Saccharomyces cerevisiae: A member of the DJ-1/ThiJ/PfpI superfamily.
Proc.Natl.Acad.Sci.USA, 101, 2004
4R4X
DownloadVisualize
BU of 4r4x by Molmil
Structure of PNGF-II in C2 space group
Descriptor: PNGF-II, ZINC ION
Authors:Sun, G, Yu, X, Celimuge, Wang, L, Li, M, Gan, J, Qu, D, Ma, J, Chen, L.
Deposit date:2014-08-20
Release date:2015-01-28
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Identification and Characterization of a Novel Prokaryotic Peptide: N-glycosidase from Elizabethkingia meningoseptica
J.Biol.Chem., 2015
4RAD
DownloadVisualize
BU of 4rad by Molmil
Aza-acyclic nucleoside phosphonates containing a second phosphonate group as inhibitors of the human, Plasmodium falciparum and vivax 6-oxopurine phosphoribosyltransferases and their pro-drugs as antimalarial agents
Descriptor: (2-{[2-(2-amino-6-oxo-3,6-dihydro-9H-purin-9-yl)ethyl][2-(2-phosphonoethoxy)ethyl]amino}ethyl)phosphonic acid, Hypoxanthine-guanine phosphoribosyltransferase, MAGNESIUM ION
Authors:Keough, D.T, Hockova, D, Janeba, Z, Wang, T.-H, Naesens, L, Edstein, M.D, Chavchich, M, Guddat, L.W.
Deposit date:2014-09-10
Release date:2015-01-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Aza-acyclic Nucleoside Phosphonates Containing a Second Phosphonate Group As Inhibitors of the Human, Plasmodium falciparum and vivax 6-Oxopurine Phosphoribosyltransferases and Their Prodrugs As Antimalarial Agents.
J.Med.Chem., 58, 2015
4RBN
DownloadVisualize
BU of 4rbn by Molmil
The crystal structure of Nitrosomonas europaea sucrose synthase: Insights into the evolutionary origin of sucrose metabolism in prokaryotes
Descriptor: Sucrose synthase:Glycosyl transferases group 1
Authors:Wu, R, Asencion Diez, M.D, Figueroa, C.M, Machtey, M, Iglesias, A.A, Ballicora, M.A, Liu, D.
Deposit date:2014-09-12
Release date:2015-07-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:The Crystal Structure of Nitrosomonas europaea Sucrose Synthase Reveals Critical Conformational Changes and Insights into Sucrose Metabolism in Prokaryotes.
J.Bacteriol., 197, 2015
4R1D
DownloadVisualize
BU of 4r1d by Molmil
The crystal structure of Tle4-Tli4 complex
Descriptor: CALCIUM ION, Uncharacterized protein
Authors:Lu, D.
Deposit date:2014-08-05
Release date:2014-12-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.749 Å)
Cite:The structural basis of the Tle4-Tli4 complex reveals the self-protection mechanism of H2-T6SS in Pseudomonas aeruginosa.
Acta Crystallogr.,Sect.D, 70, 2014
4TNE
DownloadVisualize
BU of 4tne by Molmil
Crystal Structure of Human Transthyretin Thr119Tyr Mutant
Descriptor: GLYCEROL, Transthyretin
Authors:Saelices, L, Cascio, D, Sawaya, M, Eisenberg, D.S.
Deposit date:2014-06-03
Release date:2015-10-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Uncovering the Mechanism of Aggregation of Human Transthyretin.
J.Biol.Chem., 290, 2015
4TPV
DownloadVisualize
BU of 4tpv by Molmil
Crystal Structure of Hookworm Platelet Inhibitor
Descriptor: GLYCEROL, Platelet inhibitor
Authors:Andersen, J.F, Ma, D, Francischetti, I.
Deposit date:2014-06-09
Release date:2015-04-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The structure of hookworm platelet inhibitor (HPI), a CAP superfamily member from Ancylostoma caninum.
Acta Crystallogr.,Sect.F, 71, 2015
4S1L
DownloadVisualize
BU of 4s1l by Molmil
Structure of Uranotaenia sapphirina cypovirus (CPV17) polyhedrin at 298 K
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, polyhedrin
Authors:Ginn, H.M, Messerschmidt, M, Ji, X, Zhang, H, Axford, D, Gildea, R.J, Winter, G, Brewster, A.S, Hattne, J, Wagner, A, Grimes, J.M, Evans, G, Sauter, N.K, Sutton, G, Stuart, D.I.
Deposit date:2015-01-14
Release date:2015-03-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Structure of CPV17 polyhedrin determined by the improved analysis of serial femtosecond crystallographic data.
Nat Commun, 6, 2015
4R6B
DownloadVisualize
BU of 4r6b by Molmil
Rational Design of Enhanced Photoresistance in a Photoswitchable Fluorescent Protein
Descriptor: Green to red photoconvertible GFP-like protein EosFP, SULFATE ION, SULFITE ION
Authors:Duan, C, Adam, V, Byrdin, M, Bourgeois, D.
Deposit date:2014-08-23
Release date:2015-02-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rational design of enhanced photoresistance in a photoswitchable fluorescent protein.
Methods Appl Fluoresc, 3, 2015

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon