Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1QZY
DownloadVisualize
BU of 1qzy by Molmil
Human Methionine Aminopeptidase in complex with bengamide inhibitor LAF153 and cobalt
Descriptor: (E)-(2R,3R,4S,5R)-3,4,5-TRIHYDROXY-2-METHOXY-8,8-DIMETHYL-NON-6-ENOIC ACID ((3S,6R)-6-HYDROXY-2-OXO-AZEPAN-3-YL)-AMIDE, COBALT (II) ION, Methionine aminopeptidase 2, ...
Authors:Eck, M.J, Song, H.K, Morollo, A.
Deposit date:2003-09-18
Release date:2003-11-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Proteomics-based target identification: bengamides as a new class of methionine aminopeptidase inhibitors.
J.Biol.Chem., 278, 2003
4AXP
DownloadVisualize
BU of 4axp by Molmil
NMR structure of Hsp12, a protein induced by and required for dietary restriction-induced lifespan extension in yeast.
Descriptor: 12 KDA HEAT SHOCK PROTEIN
Authors:Herbert, A.P, Riesen, M, Bloxam, L, Kosmidou, E, Wareing, B.M, Johnson, J.R, Phelan, M.M, Pennington, S.R, Lian, L.Y, Morgan, A.
Deposit date:2012-06-13
Release date:2012-08-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structure of Hsp12, a Protein Induced by and Required for Dietary Restriction-Induced Lifespan Extension in Yeast.
Plos One, 7, 2012
3U10
DownloadVisualize
BU of 3u10 by Molmil
Tetramerization dynamics of the C-terminus underlies isoform-specific cAMP-gating in HCN channels
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
Authors:Lolicato, M, Nardini, M, Gazzarrini, S, Moller, S, Bertinetti, D, Herberg, F.W, Bolognesi, M, Martin, H, Fasolini, M, Bertrand, J.A, Arrigoni, C, Thiel, G, Moroni, A.
Deposit date:2011-09-29
Release date:2011-10-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Tetramerization dynamics of C-terminal domain underlies isoform-specific cAMP gating in hyperpolarization-activated cyclic nucleotide-gated channels.
J.Biol.Chem., 286, 2011
3U0Z
DownloadVisualize
BU of 3u0z by Molmil
Tetramerization dynamics of the C-terminus underlies isoform-specific cAMP-gating in HCN channels
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Authors:Lolicato, M, Nardini, M, Gazzarrini, S, Moller, S, Bertinetti, D, Herberg, F.W, Bolognesi, M, Martin, H, Fasolini, M, Bertrand, J.A, Arrigoni, C, Thiel, G, Moroni, A.
Deposit date:2011-09-29
Release date:2011-10-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Tetramerization dynamics of C-terminal domain underlies isoform-specific cAMP gating in hyperpolarization-activated cyclic nucleotide-gated channels.
J.Biol.Chem., 286, 2011
3U11
DownloadVisualize
BU of 3u11 by Molmil
Tetramerization dynamics of the C-terminus underlies isoform-specific cAMP-gating in HCN channels
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, GLYCEROL, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
Authors:Lolicato, M, Nardini, M, Gazzarrini, S, Moller, S, Bertinetti, D, Herberg, F.W, Bolognesi, M, Martin, H, Fasolini, M, Bertrand, J.A, Arrigoni, C, Thiel, G, Moroni, A.
Deposit date:2011-09-29
Release date:2011-10-26
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Tetramerization dynamics of C-terminal domain underlies isoform-specific cAMP gating in hyperpolarization-activated cyclic nucleotide-gated channels.
J.Biol.Chem., 286, 2011
1IVW
DownloadVisualize
BU of 1ivw by Molmil
Crystal structure of copper amine oxidase from Arthrobacter globiformis: Late intermediate in topaquinone biogenesis
Descriptor: COPPER (II) ION, amine oxidase
Authors:Kim, M, Okajima, T, Kishishita, S, Yoshimura, M, Kawamori, A, Tanizawa, K, Yamaguchi, H.
Deposit date:2002-03-29
Release date:2002-08-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray snapshots of quinone cofactor biogenesis in bacterial copper amine oxidase.
Nat.Struct.Biol., 9, 2002
2LZE
DownloadVisualize
BU of 2lze by Molmil
Ligase 10C
Descriptor: ZINC ION, a primordial catalytic fold generated by in vitro evolution
Authors:Chao, F, Morelli, A, Haugner, J, Churchfield, L, Hagmann, L, Shi, L, Masterson, L, Sarangi, R, Veglia, G, Seelig, B.
Deposit date:2012-10-01
Release date:2012-10-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure and dynamics of a primordial catalytic fold generated by in vitro evolution.
Nat.Chem.Biol., 9, 2013
1IVX
DownloadVisualize
BU of 1ivx by Molmil
Crystal structure of copper amine oxidase from Arthrobacter globiformis: Holo form generated by biogenesis in crystal.
Descriptor: COPPER (II) ION, amine oxidase
Authors:Kim, M, Okajima, T, Kishishita, S, Yoshimura, M, Kawamori, A, Tanizawa, K, Yamaguchi, H.
Deposit date:2002-03-29
Release date:2002-08-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray snapshots of quinone cofactor biogenesis in bacterial copper amine oxidase.
Nat.Struct.Biol., 9, 2002
2N04
DownloadVisualize
BU of 2n04 by Molmil
Solution Structure of the phosphorylated N-terminal region of Human Cysteine String Protein (CSP)
Descriptor: DnaJ homolog subfamily C member 5
Authors:Patel, P, Lian, L, Morgan, A, Burgoyne, R.
Deposit date:2015-03-04
Release date:2016-07-13
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Phosphorylation of Cysteine String Protein Triggers a Major Conformational Switch.
Structure, 24, 2016
2N05
DownloadVisualize
BU of 2n05 by Molmil
Solution Structure of the non-phosphorylated N-terminal region of Human Cysteine String Protein (CSP)
Descriptor: DnaJ homolog subfamily C member 5
Authors:Patel, P, Lian, L, Morgan, A, Burgoyne, R.
Deposit date:2015-03-04
Release date:2016-07-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Phosphorylation of Cysteine String Protein Triggers a Major Conformational Switch.
Structure, 24, 2016
2B4Z
DownloadVisualize
BU of 2b4z by Molmil
Crystal structure of cytochrome C from bovine heart at 1.5 A resolution.
Descriptor: Cytochrome c, PROTOPORPHYRIN IX CONTAINING FE
Authors:Mirkin, N, Jakoncic, J, Stojanoff, V, Moreno, A.
Deposit date:2005-09-27
Release date:2005-10-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High resolution X-ray crystallographic structure of bovine heart cytochrome c and its application to the design of an electron transfer biosensor.
Proteins, 70, 2008
1K1V
DownloadVisualize
BU of 1k1v by Molmil
Solution Structure of the DNA-Binding Domain of MafG
Descriptor: MafG
Authors:Kusunoki, H, Motohashi, H, Katsuoka, F, Morohashi, A, Yamamoto, M, Tanaka, T.
Deposit date:2001-09-25
Release date:2002-04-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the DNA-binding domain of MafG.
Nat.Struct.Biol., 9, 2002
1IVU
DownloadVisualize
BU of 1ivu by Molmil
Crystal structure of copper amine oxidase from Arthrobacter globiformis: Initial intermediate in topaquinone biogenesis
Descriptor: COPPER (II) ION, amine oxidase
Authors:Kim, M, Okajima, T, Kishishita, S, Yoshimura, M, Kawamori, A, Tanizawa, K, Yamaguchi, H.
Deposit date:2002-03-29
Release date:2002-08-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray snapshots of quinone cofactor biogenesis in bacterial copper amine oxidase.
Nat.Struct.Biol., 9, 2002
1IVV
DownloadVisualize
BU of 1ivv by Molmil
Crystal structure of copper amine oxidase from Arthrobacter globiformis: Early intermediate in topaquinone biogenesis
Descriptor: COPPER (II) ION, amine oxidase
Authors:Kim, M, Okajima, T, Kishishita, S, Yoshimura, M, Kawamori, A, Tanizawa, K, Yamaguchi, H.
Deposit date:2002-03-29
Release date:2002-08-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray snapshots of quinone cofactor biogenesis in bacterial copper amine oxidase.
Nat.Struct.Biol., 9, 2002
6Q3S
DownloadVisualize
BU of 6q3s by Molmil
Engineered Human HLA_A2 MHC Class I molecule in complex with TCR and SV9 peptide
Descriptor: ACETATE ION, Beta-2-microglobulin, GLYCEROL, ...
Authors:Meijers, R, Anjanappa, R, Springer, S, Garcia-Alai, M.
Deposit date:2018-12-04
Release date:2019-07-24
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:High-throughput peptide-MHC complex generation and kinetic screenings of TCRs with peptide-receptive HLA-A*02:01 molecules.
Sci Immunol, 4, 2019
4X68
DownloadVisualize
BU of 4x68 by Molmil
Crystal Structure of OP0595 complexed with AmpC
Descriptor: (2S,5R)-N-(2-aminoethoxy)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, Beta-lactamase, NICKEL (II) ION
Authors:Yamada, M, Watanabe, T.
Deposit date:2014-12-07
Release date:2015-07-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:OP0595, a new diazabicyclooctane: mode of action as a serine beta-lactamase inhibitor, antibiotic and beta-lactam 'enhancer'
J.Antimicrob.Chemother., 70, 2015
4X69
DownloadVisualize
BU of 4x69 by Molmil
Crystal structure of OP0595 complexed with CTX-M-44
Descriptor: (2S,5R)-N-(2-aminoethoxy)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, 1,2-ETHANEDIOL, Beta-lactamase Toho-1
Authors:Yamada, M, Watanabe, T.
Deposit date:2014-12-07
Release date:2015-07-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:OP0595, a new diazabicyclooctane: mode of action as a serine beta-lactamase inhibitor, antibiotic and beta-lactam 'enhancer'
J.Antimicrob.Chemother., 70, 2015
8SV9
DownloadVisualize
BU of 8sv9 by Molmil
Crystal structure of ULK1 kinase domain with inhibitor MR-2088
Descriptor: (4P)-4-[(2P)-2-(1,2,5,6-tetrahydropyridin-3-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]-N-(2,2,2-trifluoroethyl)thiophene-2-carboxamide, 1,2-ETHANEDIOL, SULFATE ION, ...
Authors:Schonbrunn, E, Sun, L.
Deposit date:2023-05-15
Release date:2024-03-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Development of potent and selective ULK1/2 inhibitors based on 7-azaindole scaffold with favorable in vivo properties.
Eur.J.Med.Chem., 266, 2024
3RTT
DownloadVisualize
BU of 3rtt by Molmil
Human MMP-12 catalytic domain in complex with*(R)-N*-Hydroxy-1-(phenethylsulfonyl)pyrrolidine-2-carboxamide
Descriptor: CALCIUM ION, Macrophage metalloelastase, N-hydroxy-1-[(2-phenylethyl)sulfonyl]-D-prolinamide, ...
Authors:Bertini, I, Calderone, V, Fragai, M, Luchinat, C, Mori, M, Nativi, C.
Deposit date:2011-05-04
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Contribution of ligand free energy of solvation to design new potent MMPs inhibitors.
J.Med.Chem., 2012
3RTS
DownloadVisualize
BU of 3rts by Molmil
Human MMP-12 catalytic domain in complex with*N*-Hydroxy-2-(2-phenylethylsulfonamido)acetamide
Descriptor: CALCIUM ION, Macrophage metalloelastase, N-hydroxy-N~2~-[(2-phenylethyl)sulfonyl]glycinamide, ...
Authors:Bertini, I, Calderone, V, Fragai, M, Luchinat, C, Mori, M, Nativi, C.
Deposit date:2011-05-04
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Contribution of ligand free energy of solvation to design new potent MMPs inhibitors.
J.Med.Chem., 2012
6IB5
DownloadVisualize
BU of 6ib5 by Molmil
Mutant of flavin-dependent tryptophan halogenase Thal with altered regioselectivity (Thal-RebH5)
Descriptor: GLYCEROL, PHOSPHATE ION, Tryptophan 6-halogenase
Authors:Moritzer, A, Prior, T, Niemann, H.H.
Deposit date:2018-11-29
Release date:2018-12-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structure-based switch of regioselectivity in the flavin-dependent tryptophan 6-halogenase Thal.
J. Biol. Chem., 294, 2019
6H43
DownloadVisualize
BU of 6h43 by Molmil
Flavin-dependent Tryptophan 6-halogenase Thal
Descriptor: GLYCEROL, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Moritzer, A, Minges, H, Frese, M, Sewald, N, Niemann, H.H.
Deposit date:2018-07-20
Release date:2018-12-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-based switch of regioselectivity in the flavin-dependent tryptophan 6-halogenase Thal.
J. Biol. Chem., 294, 2019
6H44
DownloadVisualize
BU of 6h44 by Molmil
Flavin-dependent Tryptophan 6-halogenase Thal in complex with tryptophan
Descriptor: GLYCEROL, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Moritzer, A, Minges, H, Sewald, N, Niemann, H.H.
Deposit date:2018-07-20
Release date:2018-12-26
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structure-based switch of regioselectivity in the flavin-dependent tryptophan 6-halogenase Thal.
J. Biol. Chem., 294, 2019
6SLS
DownloadVisualize
BU of 6sls by Molmil
Flavin-dependent tryptophan 6-halogenase Thal in complex with FAD
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, PHOSPHATE ION, ...
Authors:Moritzer, A, Niemann, H.H.
Deposit date:2019-08-20
Release date:2019-10-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Binding of FAD and tryptophan to the tryptophan 6-halogenase Thal is negatively coupled.
Protein Sci., 28, 2019
6SLT
DownloadVisualize
BU of 6slt by Molmil
Flavin-dependent tryptophan 6-halogenase Thal in complex with tryptophan and FAD
Descriptor: ADENOSINE MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Moritzer, A, Niemann, H.H.
Deposit date:2019-08-20
Release date:2019-10-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Binding of FAD and tryptophan to the tryptophan 6-halogenase Thal is negatively coupled.
Protein Sci., 28, 2019

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon