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3KX2
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BU of 3kx2 by Molmil
Crystal structure of Prp43p in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
Authors:Nielsen, K.H, Andersen, G.R, He, Y.
Deposit date:2009-12-02
Release date:2010-01-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the function of DEAH helicases
Embo Rep., 11, 2010
7VKT
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BU of 7vkt by Molmil
cryo-EM structure of LTB4-bound BLT1 in complex with Gi protein
Descriptor: CHOLESTEROL HEMISUCCINATE, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:He, Y, Wang, N.
Deposit date:2021-10-01
Release date:2022-03-09
Last modified:2022-03-23
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis of leukotriene B4 receptor 1 activation.
Nat Commun, 13, 2022
1JSP
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BU of 1jsp by Molmil
NMR Structure of CBP Bromodomain in complex with p53 peptide
Descriptor: CREB-BINDING PROTEIN, tumor protein p53
Authors:He, Y, Mujtaba, S, Zeng, L, Yan, S, Zhou, M.-M.
Deposit date:2001-08-17
Release date:2002-08-17
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Structural mechanism of the bromodomain of the coactivator CBP in p53 transcriptional activation.
Mol.Cell, 13, 2004
1JEW
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BU of 1jew by Molmil
CRYO-EM STRUCTURE OF COXSACKIEVIRUS B3(M STRAIN) WITH ITS CELLULAR RECEPTOR, COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR (CAR).
Descriptor: COXSACKIEVIRUS AND ADENOVIRUS RECEPTOR, COXSACKIEVIRUS CAPSID, COAT PROTEIN VP1, ...
Authors:Rossmann, M.G, He, Y.
Deposit date:2001-06-19
Release date:2001-10-03
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (22 Å)
Cite:Interaction of coxsackievirus B3 with the full length coxsackievirus-adenovirus receptor.
Nat.Struct.Biol., 8, 2001
7LT3
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BU of 7lt3 by Molmil
NHEJ Long-range synaptic complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (30-MER), DNA (31-MER), ...
Authors:He, Y, Chen, S.
Deposit date:2021-02-18
Release date:2021-04-14
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural basis of long-range to short-range synaptic transition in NHEJ.
Nature, 593, 2021
2KDL
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BU of 2kdl by Molmil
NMR structures of GA95 and GB95, two designed proteins with 95% sequence identity but different folds and functions
Descriptor: designed protein
Authors:He, Y, Alexander, P, Chen, Y, Bryan, P, Orban, J.
Deposit date:2009-01-12
Release date:2009-12-29
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A minimal sequence code for switching protein structure and function.
Proc.Natl.Acad.Sci.USA, 106, 2009
7WZ7
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BU of 7wz7 by Molmil
GPR110/G12 complex
Descriptor: Adhesion G-protein coupled receptor F1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:He, Y, Zhu, X.
Deposit date:2022-02-17
Release date:2022-09-28
Last modified:2022-10-05
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Structural basis of adhesion GPCR GPR110 activation by stalk peptide and G-proteins coupling.
Nat Commun, 13, 2022
7WXU
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BU of 7wxu by Molmil
GPR110/Gq complex
Descriptor: Adhesion G-protein coupled receptor F1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:He, Y, Zhu, X.
Deposit date:2022-02-15
Release date:2022-09-28
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Structural basis of adhesion GPCR GPR110 activation by stalk peptide and G-proteins coupling.
Nat Commun, 13, 2022
7WY0
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BU of 7wy0 by Molmil
GPR110/G13 complex
Descriptor: Adhesion G-protein coupled receptor F1, Engineered G alpha 13 subunit, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:He, Y, Zhu, X.
Deposit date:2022-02-15
Release date:2022-09-28
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Structural basis of adhesion GPCR GPR110 activation by stalk peptide and G-proteins coupling.
Nat Commun, 13, 2022
7WXW
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BU of 7wxw by Molmil
GPR110/Gs complex
Descriptor: Adhesion G-protein coupled receptor F1, Engineered mini Galpha-s subunit, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:He, Y, Zhu, X.
Deposit date:2022-02-15
Release date:2022-09-28
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Structural basis of adhesion GPCR GPR110 activation by stalk peptide and G-proteins coupling.
Nat Commun, 13, 2022
7X2V
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BU of 7x2v by Molmil
GPR110/Gi complex
Descriptor: Adhesion G-protein coupled receptor F1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:He, Y, Zhu, X.
Deposit date:2022-02-26
Release date:2022-09-28
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Structural basis of adhesion GPCR GPR110 activation by stalk peptide and G-proteins coupling.
Nat Commun, 13, 2022
2MH8
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BU of 2mh8 by Molmil
GA-79-MBP cs-rosetta structures
Descriptor: GA-79-MBP, maltose binding protein
Authors:He, Y, Chen, Y, Porter, L, Bryan, P, Orban, J.
Deposit date:2013-11-19
Release date:2015-04-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Subdomain interactions foster the design of two protein pairs with 80% sequence identity but different folds.
Biophys.J., 108, 2015
2MJY
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BU of 2mjy by Molmil
Solution structure of synthetic Mamba-1 peptide
Descriptor: Mambalgin-1
Authors:He, Y, Wu, F, Tian, C.
Deposit date:2014-01-21
Release date:2015-01-28
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:One-pot hydrazide-based native chemical ligation for efficient chemical synthesis and structure determination of toxin Mambalgin-1
Chem.Commun.(Camb.), 50, 2014
2XJ7
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BU of 2xj7 by Molmil
BtGH84 in complex with 6-acetamido-6-deoxy-castanospermine
Descriptor: 6-ACETAMIDO-6-DEOXY-CASTANOSPERMINE, CALCIUM ION, O-GLCNACASE BT_4395
Authors:He, Y, Davies, G.J.
Deposit date:2010-07-02
Release date:2010-09-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Inhibition of O-Glcnacase Using a Potent and Cell-Permeable Inhibitor Does not Induce Insulin Resistance in 3T3-L1 Adipocytes.
Chem.Biol., 17, 2010
4J51
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BU of 4j51 by Molmil
Cyrstal structure of protein tyrosine phosphatase Lyp catalytic domain complex with small molecular inhibitor L75N04
Descriptor: 3-[(3-chlorophenyl)ethynyl]-2-{4-[2-(cyclopropylamino)-2-oxoethoxy]phenyl}-6-hydroxy-1-benzofuran-5-carboxylic acid, Tyrosine-protein phosphatase non-receptor type 22
Authors:Liu, D, He, Y, Zhang, Z.-Y.
Deposit date:2013-02-07
Release date:2013-07-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Potent and Selective Small-Molecule Inhibitor for the Lymphoid-Specific Tyrosine Phosphatase (LYP), a Target Associated with Autoimmune Diseases.
J.Med.Chem., 56, 2013
7WF7
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BU of 7wf7 by Molmil
Cryo-EM of Sphingosine 1-phosphate receptor 1 / Gi complex bound to S1P
Descriptor: (2S,3R,4E)-2-amino-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:He, Y, Xu, Z.
Deposit date:2021-12-26
Release date:2022-01-05
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of sphingosine-1-phosphate receptor 1 activation and biased agonism.
Nat.Chem.Biol., 18, 2022
8H4I
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BU of 8h4i by Molmil
DHA-bound FFAR4 in complex with Gs
Descriptor: DOCOSA-4,7,10,13,16,19-HEXAENOIC ACID, Free fatty acid receptor 4, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:He, Y, Yin, H.
Deposit date:2022-10-10
Release date:2023-06-21
Last modified:2023-08-09
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Structural basis of omega-3 fatty acid receptor FFAR4 activation and G protein coupling selectivity.
Cell Res., 33, 2023
8H4L
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BU of 8h4l by Molmil
DHA-bound FFAR4 in complex with Gq
Descriptor: DOCOSA-4,7,10,13,16,19-HEXAENOIC ACID, Free fatty acid receptor 4, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:He, Y, Yin, H.
Deposit date:2022-10-10
Release date:2023-06-21
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Structural basis of omega-3 fatty acid receptor FFAR4 activation and G protein coupling selectivity.
Cell Res., 33, 2023
8H4K
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BU of 8h4k by Molmil
GW9508-bound FFAR4 in complex with Gq
Descriptor: 3-(4-{[(3-phenoxyphenyl)methyl]amino}phenyl)propanoic acid, Free fatty acid receptor 4, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:He, Y, Yin, H.
Deposit date:2022-10-10
Release date:2023-06-21
Last modified:2023-08-09
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of omega-3 fatty acid receptor FFAR4 activation and G protein coupling selectivity.
Cell Res., 33, 2023
8IYS
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BU of 8iys by Molmil
TUG891-bound FFAR4 in complex with Gq
Descriptor: 3-{4-[(4-fluoro-4'-methyl[1,1'-biphenyl]-2-yl)methoxy]phenyl}propanoic acid, Free fatty acid receptor 4, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:He, Y, Yin, H.
Deposit date:2023-04-06
Release date:2023-06-21
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Structural basis of omega-3 fatty acid receptor FFAR4 activation and G protein coupling selectivity.
Cell Res., 33, 2023
7EO2
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BU of 7eo2 by Molmil
Cryo-EM of Sphingosine 1-phosphate receptor 1 / Gi complex bound to FTY720p
Descriptor: (2~{S})-2-azanyl-4-(4-octylphenyl)-2-[[oxidanyl-bis(oxidanylidene)-$l^{6}-phosphanyl]oxymethyl]butan-1-ol, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:He, Y, Xu, Z, Ikuta, T.
Deposit date:2021-04-21
Release date:2022-01-05
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Structural basis of sphingosine-1-phosphate receptor 1 activation and biased agonism.
Nat.Chem.Biol., 18, 2022
7EO4
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BU of 7eo4 by Molmil
Cryo-EM of Sphingosine 1-phosphate receptor 1 / Gi complex bound to BAF312
Descriptor: 1-[[4-[(~{E})-~{N}-[[4-cyclohexyl-3-(trifluoromethyl)phenyl]methoxy]-~{C}-methyl-carbonimidoyl]-2-ethyl-phenyl]methyl]azetidine-3-carboxylic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:He, Y, Xu, Z, Ikuta, T, Inoue, A.
Deposit date:2021-04-21
Release date:2022-01-05
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Structural basis of sphingosine-1-phosphate receptor 1 activation and biased agonism.
Nat.Chem.Biol., 18, 2022
8GRR
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BU of 8grr by Molmil
Complex of FMDV A/WH/CHA/09 and bovine neutralizing scFv antibody W125
Descriptor: A/WH/CHA/09 VP1, A/WH/CHA/09 VP2, A/WH/CHA/09 VP3, ...
Authors:He, Y, Kun, L.
Deposit date:2022-09-02
Release date:2023-10-11
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.72 Å)
Cite:Conserved antigen structures and antibody-driven variations on foot-and-mouth disease virus serotype A revealed by bovine neutralizing monoclonal antibodies.
Plos Pathog., 19, 2023
8GSP
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BU of 8gsp by Molmil
Complex of FMDV A/WH/CHA/09 and bovine neutralizing scFv antibody W2
Descriptor: A/WH/CHA/09 VP1, A/WH/CHA/09 VP2, A/WH/CHA/09 VP3, ...
Authors:He, Y, Li, K.
Deposit date:2022-09-06
Release date:2023-10-11
Last modified:2023-12-06
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Conserved antigen structures and antibody-driven variations on foot-and-mouth disease virus serotype A revealed by bovine neutralizing monoclonal antibodies.
Plos Pathog., 19, 2023
6LG2
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BU of 6lg2 by Molmil
VanR bound to Vanillate
Descriptor: 4-HYDROXY-3-METHOXYBENZOATE, Predicted transcriptional regulators
Authors:He, Y, Bharath, S.R, Song, H.
Deposit date:2019-12-04
Release date:2020-02-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Developing a highly efficient hydroxytyrosol whole-cell catalyst by de-bottlenecking rate-limiting steps.
Nat Commun, 11, 2020

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