Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4NPX
DownloadVisualize
BU of 4npx by Molmil
Structure of hypothetical protein Cj0539 from Campylobacter jejuni
Descriptor: Putative uncharacterized protein
Authors:Filippova, E.V, Minasov, G, Shuvalova, L, Kiryukhina, O, Adkins, J.N, Endres, M, Nissen, M, Konkel, M, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG), Program for the Characterization of Secreted Effector Proteins (PCSEP)
Deposit date:2013-11-22
Release date:2014-01-01
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structure of hypothetical protein Cj0539 from Campylobacter jejuni
To be Published
4N1X
DownloadVisualize
BU of 4n1x by Molmil
Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with penicillin G
Descriptor: OPEN FORM - PENICILLIN G, Peptidoglycan glycosyltransferase
Authors:Filippova, E.V, Minasov, G, Shuvalova, L, Kiryukhina, O, Babnigg, G, Rubin, E, Sacchettini, J, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
Deposit date:2013-10-04
Release date:2013-10-30
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with penicillin G
To be Published
4Q51
DownloadVisualize
BU of 4q51 by Molmil
Crystal structure of a putative molybdenum cofactor biosynthesis protein F from Burkholderia cenocepacia J2315
Descriptor: CALCIUM ION, Uncharacterized protein
Authors:Filippova, E.V, Wawrzak, Z, Kiryukhina, O, Minasov, G, Jedrzejczak, R, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-04-15
Release date:2014-05-07
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a putative molybdenum cofactor biosynthesis protein F from Burkholderia cenocepacia J2315
To be Published
4MQB
DownloadVisualize
BU of 4mqb by Molmil
Crystal structure of thymidylate kinase from Staphylococcus aureus in complex with 2-(N-morpholino)ethanesulfonic acid
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, TETRAETHYLENE GLYCOL, Thymidylate kinase
Authors:Filippova, E.V, Minasov, G, Shuvalova, L, Kiryukhina, O, Jedrzejczak, R, Babnigg, G, Rubin, E, Sacchettini, J, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
Deposit date:2013-09-16
Release date:2013-10-23
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of thymidylate kinase from Staphylococcus aureus in complex with 2-(N-morpholino)ethanesulfonic acid
To be Published
4QJG
DownloadVisualize
BU of 4qjg by Molmil
Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with penicillin V
Descriptor: (2R,4S)-5,5-dimethyl-2-{(1R)-2-oxo-1-[(phenoxyacetyl)amino]ethyl}-1,3-thiazolidine-4-carboxylic acid, Peptidoglycan glycosyltransferase
Authors:Filippova, E.V, Minasov, G, Kiryukhina, O, Clancy, S, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-06-03
Release date:2014-07-09
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with penicillin V
To be Published
4PYR
DownloadVisualize
BU of 4pyr by Molmil
Structure of a putative branched-chain amino acid ABC transporter from Chromobacterium violaceum ATCC 12472
Descriptor: GLUTATHIONE, Putative branched-chain amino acid ABC transporter
Authors:Filippova, E.V, Minasov, G, Shuvalova, L, Kiryukhina, O, Endres, M, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-03-27
Release date:2014-04-23
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of a putative branched-chain amino acid ABC transporter from Chromobacterium violaceum ATCC 12472
To be Published
4R0Q
DownloadVisualize
BU of 4r0q by Molmil
Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with cephalothin
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CEPHALOTHIN GROUP, Peptidoglycan glycosyltransferase, ...
Authors:Filippova, E.V, Minasov, G, Kiryukhina, O, Clancy, S, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-08-01
Release date:2014-08-27
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with cephalothin
To be Published
4R1G
DownloadVisualize
BU of 4r1g by Molmil
Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with cloxacillin
Descriptor: CLOXACILLIN (OPEN FORM), Peptidoglycan glycosyltransferase
Authors:Filippova, E.V, Minasov, G, Kiryukhina, O, Clancy, S, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-08-05
Release date:2014-08-27
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with cloxacillin
To be Published
4R87
DownloadVisualize
BU of 4r87 by Molmil
Crystal structure of spermidine N-acetyltransferase from Vibrio cholerae in complex with CoA and spermine
Descriptor: COENZYME A, DI(HYDROXYETHYL)ETHER, SPERMINE, ...
Authors:Filippova, E.V, Minasov, G, Kiryukhina, O, Kuhn, M.L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-08-29
Release date:2015-03-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:A Novel Polyamine Allosteric Site of SpeG from Vibrio cholerae Is Revealed by Its Dodecameric Structure.
J.Mol.Biol., 427, 2015
4OVD
DownloadVisualize
BU of 4ovd by Molmil
Crystal structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum DSM 20469
Descriptor: CALCIUM ION, Peptidoglycan glycosyltransferase
Authors:Filippova, E.V, Wawrzak, Z, Kiryukhina, O, Babnigg, G, Clancy, S, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-02-21
Release date:2014-03-12
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum DSM 20469
To be Published
4QVT
DownloadVisualize
BU of 4qvt by Molmil
Crystal structure of predicted N-acyltransferase (ypeA) in complex with acetyl-CoA from Escherichia coli
Descriptor: ACETYL COENZYME *A, Acetyltransferase YpeA, SULFATE ION
Authors:Filippova, E.V, Minasov, G, Winsor, G, Dubrovska, I, Shuvalova, L, Wolfe, A.J, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-07-15
Release date:2014-07-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.948 Å)
Cite:Crystal structure of predicted N-acyltransferase (ypeA) in complex with acetyl-CoA from Escherichia coli
To be Published
4R3J
DownloadVisualize
BU of 4r3j by Molmil
Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with cefapirin
Descriptor: (2R)-2-[(1R)-1-(acetylamino)-2-oxoethyl]-5-methyl-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, GLYCEROL, PHOSPHATE ION, ...
Authors:Filippova, E.V, Minasov, G, Kiryukhina, O, Clancy, S, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-08-15
Release date:2014-09-17
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum in complex with cefapirin
To be Published
4R57
DownloadVisualize
BU of 4r57 by Molmil
Crystal structure of spermidine N-acetyltransferase from Vibrio cholerae in complex with acetyl-CoA
Descriptor: ACETYL COENZYME *A, DI(HYDROXYETHYL)ETHER, Spermidine n1-acetyltransferase, ...
Authors:Filippova, E.V, Minasov, G, Kiryukhina, O, Shuvalova, L, Kuhn, M.L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-08-20
Release date:2015-03-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.079 Å)
Cite:A Novel Polyamine Allosteric Site of SpeG from Vibrio cholerae Is Revealed by Its Dodecameric Structure.
J.Mol.Biol., 427, 2015
7RTH
DownloadVisualize
BU of 7rth by Molmil
Crystal structure of an anti-lysozyme nanobody in complex with an anti-nanobody Fab "NabFab"
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Fragment Antigen-Binding Heavy Chain, ...
Authors:Filippova, E.V, Mukherjee, S, Bloch, J.S, Locher, K.P, Kossiakoff, A.A.
Deposit date:2021-08-13
Release date:2021-09-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Development of a universal nanobody-binding Fab module for fiducial-assisted cryo-EM studies of membrane proteins.
Proc.Natl.Acad.Sci.USA, 118, 2021
2GSD
DownloadVisualize
BU of 2gsd by Molmil
NAD-dependent formate dehydrogenase from bacterium Moraxella sp.C2 in complex with NAD and azide
Descriptor: AZIDE ION, NAD-dependent formate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Filippova, E.V, Polyakov, K.M, Tikhonova, T.V, Sadykhov, I.G, Shabalin, I.G, Tishkov, V.I, Popov, V.O.
Deposit date:2006-04-26
Release date:2006-05-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structures of the apo and holo forms of formate dehydrogenase from the bacterium Moraxella sp. C-1: towards understanding the mechanism of the closure of the interdomain cleft.
Acta Crystallogr.,Sect.D, 65, 2009
2Q24
DownloadVisualize
BU of 2q24 by Molmil
Crystal structure of TetR transcriptional regulator SCO0520 from Streptomyces coelicolor
Descriptor: ACETATE ION, CHLORIDE ION, Putative tetR family transcriptional regulator
Authors:Cymborowski, M, Chruszcz, M, Koclega, K.D, Filippova, E.V, Xu, X, Gu, J, Savchenko, A, Edwards, A.M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-05-25
Release date:2007-07-03
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a putative transcriptional regulator SCO0520 from Streptomyces coelicolor A3(2) reveals an unusual dimer among TetR family proteins.
J.Struct.Funct.Genom., 12, 2011
8T6I
DownloadVisualize
BU of 8t6i by Molmil
Structure of VHH-Fab complex with engineered Crystal Kappa region
Descriptor: Fab heavy chain, Fab light chain, GLYCEROL, ...
Authors:Filippova, E.V, Thompson, I, Kossiakoff, A.A.
Deposit date:2023-06-16
Release date:2023-11-29
Last modified:2024-01-03
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes.
Protein Sci., 33, 2024
8T9Y
DownloadVisualize
BU of 8t9y by Molmil
Structure of VHH-Fab complex with engineered Elbow FNQIKG and Crystal Kappa regions
Descriptor: DI(HYDROXYETHYL)ETHER, Fab heavy chain, Fab light chain, ...
Authors:Filippova, E.V, Thompson, I, Kossiakoff, A.A.
Deposit date:2023-06-26
Release date:2023-11-29
Last modified:2024-01-03
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes.
Protein Sci., 33, 2024
8T58
DownloadVisualize
BU of 8t58 by Molmil
Structure of VHH-Fab complex with engineered FNQIKG elbow region
Descriptor: CHLORIDE ION, Fab heavy chain, Fab light chain, ...
Authors:Filippova, E.V, Kossiakoff, A.A.
Deposit date:2023-06-12
Release date:2023-11-29
Last modified:2024-01-03
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes.
Protein Sci., 33, 2024
8T8I
DownloadVisualize
BU of 8t8i by Molmil
Structure of VHH-Fab complex with engineered Elbow FNQIKG, Crystal Kappa and SER substitutions
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Fab heavy chain, ...
Authors:Filippova, E.V, Thompson, I, Kossiakoff, A.A.
Deposit date:2023-06-22
Release date:2023-11-29
Last modified:2024-01-03
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes.
Protein Sci., 33, 2024
3Q3V
DownloadVisualize
BU of 3q3v by Molmil
Crystal structure of Phosphoglycerate Kinase from Campylobacter jejuni.
Descriptor: FORMIC ACID, POTASSIUM ION, Phosphoglycerate kinase, ...
Authors:Filippova, E.V, Wawrzak, Z, Onopriyenko, O, Edwards, A, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-12-22
Release date:2011-01-12
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.145 Å)
Cite:Crystal structures of putative phosphoglycerate kinases from B. anthracis and C. jejuni.
J.Struct.Funct.Genom., 13, 2012
4NOG
DownloadVisualize
BU of 4nog by Molmil
Crystal structure of a putative ornithine aminotransferase from Toxoplasma gondii ME49 in complex with pyrodoxal-5'-phosphate
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, BETA-MERCAPTOETHANOL, ...
Authors:Filippova, E.V, Halavaty, A, Ruan, J, Shuvalova, L, Flores, K, Dubrovska, I, Ngo, H, Shanmugam, D, Roos, D, Anderson, W.F, Center for Structural Genomics of Infectious Diseases, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-11-19
Release date:2013-12-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:CSGID Solves Structures and Identifies Phenotypes for Five Enzymes in Toxoplasma gondii .
Front Cell Infect Microbiol, 8, 2018
6BXG
DownloadVisualize
BU of 6bxg by Molmil
1.45 Angstrom Resolution Crystal Structure of PDZ domain of Carboxy-Terminal Protease from Vibrio cholerae in Complex with Peptide.
Descriptor: CHLORIDE ION, IODIDE ION, LEU-ILE-ALA, ...
Authors:Minasov, G, Shuvalova, L, Filippova, E.V, Kiryukhina, O, Grimshaw, S, Kwon, K, Anderson, W.F, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-12-18
Release date:2018-01-03
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:1.45 Angstrom Resolution Crystal Structure of PDZ domain of Carboxy-Terminal Protease from Vibrio cholerae in Complex with Peptide.
To Be Published
6U8C
DownloadVisualize
BU of 6u8c by Molmil
Crystal structure of an engineered ultra-high affinity Fab-Protein G complex
Descriptor: Antibody heavy chain Fab, Antibody light chain Fab, Protein G
Authors:Slezak, T, Filippova, E.V, Davydova, E.K, Kossiakoff, A.A.
Deposit date:2019-09-04
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:An engineered ultra-high affinity Fab-Protein G pair enables a modular antibody platform with multifunctional capability.
Protein Sci., 29, 2020
4YF1
DownloadVisualize
BU of 4yf1 by Molmil
1.85 angstrom crystal structure of lmo0812 from Listeria monocytogenes EGD-e
Descriptor: CITRATE ANION, Lmo0812 protein, SODIUM ION
Authors:Krishna, S.N, Light, S.H, Filippova, E.V, Minasov, G, Kiryukhina, O, Jedrzejczak, R, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-02-24
Release date:2015-03-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:1.85 angstrom crystal structure of lmo0812 from Listeria monocytogenes EGD-e
To Be Published

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon