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2LYP
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BU of 2lyp by Molmil
NOE-based 3D structure of the monomer of CylR2 in equilibrium with predissociated homodimer at 266K (-7 Celsius degrees)
Descriptor: CylR2
Authors:Jaremko, M, Jaremko, L, Kim, H, Cho, M, Schwieters, C.D, Giller, K, Becker, S, Zweckstetter, M.
Deposit date:2012-09-19
Release date:2013-02-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Cold denaturation of a protein dimer monitored at atomic resolution.
Nat.Chem.Biol., 9, 2013
2N02
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BU of 2n02 by Molmil
Solution structure of the A147T variant of the mitochondrial translocator protein (tspo) in complex with pk11195
Descriptor: N-[(2R)-butan-2-yl]-1-(2-chlorophenyl)-N-methylisoquinoline-3-carboxamide, Translocator protein
Authors:Jaremko, M, Jaremko, L, Giller, K, Becker, S, Zweckstetter, M.
Deposit date:2015-03-04
Release date:2015-06-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Integrity of the A147T Polymorph of Mammalian TSPO.
Chembiochem, 16, 2015
2MEX
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BU of 2mex by Molmil
Structure of the tetrameric building block of the Salmonella Typhimurium PrgI Type three secretion system needle
Descriptor: Protein PrgI
Authors:Loquet, A, Habenstein, B, Chevelkov, V, Giller, K, Becker, S, Lange, A.
Deposit date:2013-10-01
Release date:2013-12-25
Last modified:2024-05-01
Method:SOLID-STATE NMR
Cite:Atomic structure and handedness of the building block of a biological assembly.
J.Am.Chem.Soc., 135, 2013
2LYL
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BU of 2lyl by Molmil
NOE-based 3D structure of the predissociated homodimer of CylR2 in equilibrium with monomer at 266K (-7 Celsius degrees)
Descriptor: CylR2
Authors:Jaremko, M, Jaremko, L, Kim, H, Cho, M, Schwieters, C.D, Giller, K, Becker, S, Zweckstetter, M.
Deposit date:2012-09-19
Release date:2013-02-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Cold denaturation of a protein dimer monitored at atomic resolution.
Nat.Chem.Biol., 9, 2013
2KDU
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BU of 2kdu by Molmil
Structural basis of the Munc13-1/Ca2+-Calmodulin interaction: A novel 1-26 calmodulin binding motif with a bipartite binding mode
Descriptor: CALCIUM ION, Calmodulin, Protein unc-13 homolog A
Authors:Rodriguez-Castaneda, F.A, Maestre-Martinez, M, Coudevylle, N, Dimova, K, Jahn, O, Junge, H, Becker, S, Brose, N, Carlomagno, T, Griesinger, C.
Deposit date:2009-01-19
Release date:2009-12-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Modular architecture of Munc13/calmodulin complexes: dual regulation by Ca2+ and possible function in short-term synaptic plasticity.
Embo J., 29, 2010
2N3D
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BU of 2n3d by Molmil
Atomic structure of the cytoskeletal bactofilin BacA revealed by solid-state NMR
Descriptor: Bactofilin A
Authors:Shi, C, Fricke, P, Lin, L, Chevelkov, V, Wegstroth, M, Giller, K, Becker, S, Thanbichler, M, Lange, A.
Deposit date:2015-05-29
Release date:2015-12-16
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Atomic-resolution structure of cytoskeletal bactofilin by solid-state NMR.
Sci Adv, 1, 2015
2MY3
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BU of 2my3 by Molmil
Snu17p-Pml1p structure intermediate during RES complex assembly
Descriptor: Pre-mRNA leakage protein 1, U2 snRNP component IST3
Authors:Wysoczanski, P, Becker, S, Zweckstetter, M.
Deposit date:2015-01-19
Release date:2015-08-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structures of intermediates during RES complex assembly.
Sci Rep, 5, 2015
7NXZ
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BU of 7nxz by Molmil
Synthetic glycoform of Human Interleukin 6
Descriptor: Interleukin-6
Authors:Weyand, M, Unverzagt, C.
Deposit date:2021-03-19
Release date:2021-04-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:Natural Glycoforms of Human Interleukin 6 Show Atypical Plasma Clearance.
Angew.Chem.Int.Ed.Engl., 60, 2021
6V5D
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BU of 6v5d by Molmil
EROS3 RDC and NOE Derived Ubiquitin Ensemble
Descriptor: Ubiquitin
Authors:Lange, O.F, Lakomek, N.A, Smith, C.A, Griesinger, C, de Groot, B.L.
Deposit date:2019-12-04
Release date:2020-01-01
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Enhancing NMR derived ensembles with kinetics on multiple timescales.
J.Biomol.Nmr, 74, 2020
8A6M
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BU of 8a6m by Molmil
Phosphatidylserine-dependent synaptic vesicle membrane sculpting by synaptogyrin
Descriptor: Isoform 1B of Synaptogyrin-1
Authors:Yu, T.K, Eastep, G.N, Flores, D, Zweckstetter, M.
Deposit date:2022-06-18
Release date:2023-05-24
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Phosphatidylserine-dependent structure of synaptogyrin remodels the synaptic vesicle membrane.
Nat.Struct.Mol.Biol., 30, 2023
4ZG4
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BU of 4zg4 by Molmil
Myosin Vc Pre-powerstroke
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Ropars, V, Pylypenko, O, Sweeney, L, Houdusse, A.
Deposit date:2015-04-22
Release date:2016-03-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Force-producing ADP state of myosin bound to actin.
Proc.Natl.Acad.Sci.USA, 113, 2016
6QCU
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BU of 6qcu by Molmil
Crystal structure of a Fab portion of the anti EBOV 3T0331 antibody
Descriptor: Heavy chain, Light chain, SULFATE ION
Authors:Diskin, R, Cohen-Dvashi, H.
Deposit date:2018-12-31
Release date:2019-10-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:rVSV-ZEBOV induces a polyclonal and convergent B cell response with potent Ebola virus-neutralizing antibodies
Nat.Med. (N.Y.), 2019
6QD8
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BU of 6qd8 by Molmil
EM structure of a EBOV-GP bound to 4M0368 neutralizing antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein, Envelope glycoprotein,Virion spike glycoprotein,EBOV-GP1, ...
Authors:Diskin, R, Cohen-Dvashi, H.
Deposit date:2019-01-01
Release date:2019-10-02
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:rVSV-ZEBOV induces a polyclonal and convergent B cell response with potent Ebola virus-neutralizing antibodies
Nat.Med. (N.Y.), 2019
7JZT
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BU of 7jzt by Molmil
Low resolution crystal structure of Zaire Ebola virus VP40 in space group P6422
Descriptor: Matrix protein VP40
Authors:Norris, M.J, Bornholdt, Z.A, Saphire, E.O.
Deposit date:2020-09-02
Release date:2020-10-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.77 Å)
Cite:Ebola and Marburg virus matrix layers are locally ordered assemblies of VP40 dimers.
Elife, 9, 2020
7JZJ
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BU of 7jzj by Molmil
Crystal structure demonstrating CTD-CTD interactions of Zaire Ebola virus VP40 dimer
Descriptor: Matrix protein VP40, PENTAETHYLENE GLYCOL
Authors:Norris, M.J, Bornholdt, Z.A, Saphire, E.O.
Deposit date:2020-09-02
Release date:2020-10-28
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Ebola and Marburg virus matrix layers are locally ordered assemblies of VP40 dimers.
Elife, 9, 2020
4YXS
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BU of 4yxs by Molmil
CAMP-DEPENDENT PROTEIN KINASE PKA CATALYTIC SUBUNIT WITH PKI-5-24
Descriptor: N-BENZYL-9H-PURIN-6-AMINE, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase inhibitor alpha
Authors:Schiffer, A, Wendt, K.U.
Deposit date:2015-03-23
Release date:2015-05-20
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:A combination of spin diffusion methods for the determination of protein-ligand complex structural ensembles.
Angew.Chem.Int.Ed.Engl., 54, 2015
4YXR
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BU of 4yxr by Molmil
CRYSTAL STRUCTURE OF PKA IN COMPLEX WITH inhibitor.
Descriptor: 3-methyl-2H-indazole, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase inhibitor alpha
Authors:Schiffer, A, Wendt, K.U.
Deposit date:2015-03-23
Release date:2015-05-27
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:A combination of spin diffusion methods for the determination of protein-ligand complex structural ensembles.
Angew.Chem.Int.Ed.Engl., 54, 2015
6QD7
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BU of 6qd7 by Molmil
EM structure of a EBOV-GP bound to 3T0331 neutralizing antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein, Envelope glycoprotein,Virion spike glycoprotein,EBOV-GP1, ...
Authors:Diskin, R, Cohen-Dvashi, H.
Deposit date:2019-01-01
Release date:2019-10-02
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Polyclonal and convergent antibody response to Ebola virus vaccine rVSV-ZEBOV.
Nat. Med., 25, 2019
6HYI
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BU of 6hyi by Molmil
Regulatory subunit of a cAMP-independent protein kinase A from Trypanosoma cruzi at 1.4 A resolution in complex with inosine
Descriptor: INOSINE, Protein kinase A regulatory subunit
Authors:Volpato Santos, Y, Lorentzen, E, Basquin, J, Boshart, M.
Deposit date:2018-10-22
Release date:2019-11-13
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (1.39944851 Å)
Cite:Purine nucleosides replace cAMP in allosteric regulation of PKA in trypanosomatid pathogens.
Elife, 12, 2024
7QI2
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BU of 7qi2 by Molmil
Magic-angle spinning NMR structure of the human voltage-dependent anion channel 1 (E73V/C127A/C232S) in DMPC lipid bilayers
Descriptor: Voltage-dependent anion-selective channel protein 1
Authors:Najbauer, E.E, Andreas, L.B.
Deposit date:2021-12-14
Release date:2022-03-16
Last modified:2024-06-19
Method:SOLID-STATE NMR
Cite:Structure and Gating Behavior of the Human Integral Membrane Protein VDAC1 in a Lipid Bilayer.
J.Am.Chem.Soc., 144, 2022
9EYH
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BU of 9eyh by Molmil
Ubiquitin conjugating enzyme Ubc6 UBC domain with isopeptide-linked ubiquitin
Descriptor: Ubiquitin-40S ribosomal protein S31, Ubiquitin-conjugating enzyme E2 6
Authors:Swarnkar, A, Stein, A.
Deposit date:2024-04-09
Release date:2024-11-20
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Determinants of chemoselectivity in ubiquitination by the J2 family of ubiquitin-conjugating enzymes.
Embo J., 43, 2024
9EWP
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BU of 9ewp by Molmil
Crystal structure of yeast E2 Ubiquitin-conjugating enzyme Ubc6 UBC domain
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
Authors:Swarnkar, A, Stein, A.
Deposit date:2024-04-04
Release date:2024-11-20
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Determinants of chemoselectivity in ubiquitination by the J2 family of ubiquitin-conjugating enzymes.
Embo J., 43, 2024
9EN5
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BU of 9en5 by Molmil
Crystal structure of yeast E2 Ubiquitin-conjugating enzyme Ubc6 UBC domain
Descriptor: Ubiquitin-conjugating enzyme E2 6
Authors:Swarnkar, A, Stein, A.
Deposit date:2024-03-12
Release date:2024-11-20
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Determinants of chemoselectivity in ubiquitination by the J2 family of ubiquitin-conjugating enzymes.
Embo J., 43, 2024
8QWQ
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BU of 8qwq by Molmil
Magic-angle spinning NMR Structure of Opa60 in Lipid Bilayers
Descriptor: Opacity protein opA60 (Fragment)
Authors:Forster, M.C, Andreas, L.B.
Deposit date:2023-10-19
Release date:2024-07-24
Method:SOLID-STATE NMR
Cite:Magic-angle spinning NMR structure of Opa60 in lipid bilayers.
J Struct Biol X, 9, 2024
6Y2G
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BU of 6y2g by Molmil
Crystal structure (orthorhombic form) of the complex resulting from the reaction between SARS-CoV-2 (2019-nCoV) main protease and tert-butyl (1-((S)-1-(((S)-4-(benzylamino)-3,4-dioxo-1-((S)-2-oxopyrrolidin-3-yl)butan-2-yl)amino)-3-cyclopropyl-1-oxopropan-2-yl)-2-oxo-1,2-dihydropyridin-3-yl)carbamate (alpha-ketoamide 13b)
Descriptor: 3C-like proteinase nsp5, ~{tert}-butyl ~{N}-[1-[(2~{S})-3-cyclopropyl-1-oxidanylidene-1-[[(2~{S},3~{R})-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-4-[(phenylmethyl)amino]butan-2-yl]amino]propan-2-yl]-2-oxidanylidene-pyridin-3-yl]carbamate
Authors:Zhang, L, Lin, D, Sun, X, Hilgenfeld, R.
Deposit date:2020-02-15
Release date:2020-03-04
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of SARS-CoV-2 main protease provides a basis for design of improved alpha-ketoamide inhibitors.
Science, 368, 2020

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