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2YY2
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BU of 2yy2 by Molmil
Crystal structure of the human Phosphodiesterase 9A catalytic domain complexed with IBMX
Descriptor: 3-ISOBUTYL-1-METHYLXANTHINE, High-affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, MAGNESIUM ION, ...
Authors:Handa, N, Shirouzu, M, Terada, T, Omori, K, Kotera, J, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-27
Release date:2007-10-30
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the human Phosphodiesterase 9A catalytic domain.
To be Published
1WZ2
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BU of 1wz2 by Molmil
The crystal structure of Leucyl-tRNA synthetase and tRNA(leucine) complex
Descriptor: Leucyl-tRNA synthetase, tRNA
Authors:Fukunaga, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-02-21
Release date:2005-09-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:The crystal structure of Leucyl-tRNA synthetase and tRNA(leucine) complex
to be published
2YWG
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BU of 2ywg by Molmil
Crystal structure of GTP-bound LepA from Aquifex aeolicus
Descriptor: GTP-binding protein LepA, GUANOSINE-5'-TRIPHOSPHATE
Authors:Kawazoe, M, Takemoto, C, Kaminishi, T, Nishino, A, Nakayama-Ushikoshi, R, Hanawa-Suetsugu, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2008-04-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Crystal structures of GTP-binding protein LepA from Aquifex aeolicus
To be Published
2YWV
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Crystal structure of SAICAR synthetase from Geobacillus kaustophilus
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Phosphoribosylaminoimidazole succinocarboxamide synthetase, ...
Authors:Kanagawa, M, Baba, S, Kuramitsu, S, Yokoyama, S, Kawai, G, Sampei, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-23
Release date:2007-10-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of SAICAR synthetase from Geobacillus kaustophilus
To be Published
2YXG
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Crystal structure of Dihyrodipicolinate Synthase (dapA)
Descriptor: Dihydrodipicolinate synthase
Authors:Padmanabhan, B, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-26
Release date:2007-10-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of dihydrodipicolinate synthase from Methanocaldococcus jannaschii.
Acta Crystallogr.,Sect.F, 65, 2009
2YYE
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Crystal structure of selenophosphate synthetase from Aquifex aeolicus complexed with AMPCPP
Descriptor: COBALT (II) ION, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, PHOSPHATE ION, ...
Authors:Itoh, Y, Sekine, S, Matsumoto, E, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-29
Release date:2008-04-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of selenophosphate synthetase essential for selenium incorporation into proteins and RNAs
J.Mol.Biol., 385, 2009
2YZR
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BU of 2yzr by Molmil
Crystal structure of pyridoxine biosynthesis protein from Methanocaldococcus jannaschii
Descriptor: CHLORIDE ION, Pyridoxal biosynthesis lyase pdxS
Authors:Manzoku, M, Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of pyridoxine biosynthesis protein from Methanocaldococcus jannaschii
to be published
2Z0B
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BU of 2z0b by Molmil
Crystal structure of CBM20 domain of human putative glycerophosphodiester phosphodiesterase 5 (KIAA1434)
Descriptor: PHOSPHATE ION, Putative glycerophosphodiester phosphodiesterase 5
Authors:Saijo, S, Nishino, A, Kishishita, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2008-05-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of CBM20 domain of human putative glycerophosphodiester phosphodiesterase 5 (KIAA1434)
To be Published
2Z0N
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BU of 2z0n by Molmil
Crystal structure of APPL1-BAR domain
Descriptor: DCC-interacting protein 13-alpha
Authors:Murayama, K, Kato-Murayama, M, Sakamoto, A, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2008-05-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of APPL1-BAR domain
To be Published
2Z0P
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Crystal structure of PH domain of Bruton's tyrosine kinase
Descriptor: (2R)-3-{[(S)-{[(2S,3R,5S,6S)-2,6-DIHYDROXY-3,4,5-TRIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-(1-HYDROXY BUTOXY)PROPYL BUTYRATE, Tyrosine-protein kinase BTK, ZINC ION
Authors:Murayama, K, Kato-Murayama, M, Mishima, C, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2008-05-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Crystal structure of the Bruton's tyrosine kinase PH domain with phosphatidylinositol
Biochem.Biophys.Res.Commun., 377, 2008
2YU8
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Solution structure of the C2H2 type zinc finger (region 648-680) of human Zinc finger protein 347
Descriptor: ZINC ION, Zinc finger protein 347
Authors:Tochio, N, Tomizawa, T, Abe, H, Saito, K, Li, H, Sato, M, Koshiba, S, Kobayashi, N, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2007-10-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the C2H2 type zinc finger (region 648-680) of human Zinc finger protein 347
To be Published
2YUF
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BU of 2yuf by Molmil
Solution structure of the NCD2 domain in human transcriptional repressor Nab1 protein
Descriptor: NGFI-A-binding protein 1
Authors:Saito, K, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2008-04-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the NCD2 domain in human transcriptional repressor Nab1 protein
To be Published
2YUX
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BU of 2yux by Molmil
Solution Structure of 3rd Fibronectin type three Domain of slow type Myosin-Binding Protein C
Descriptor: Myosin-binding protein C, slow-type
Authors:Niraula, T.N, Tochio, N, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-06
Release date:2008-04-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of 3rd Fibronectin type three Domain of slow type Myosin-Binding Protein C
To be Published
2YW9
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BU of 2yw9 by Molmil
Crystal structure of TT0143 from Thermus thermophilus HB8
Descriptor: Enoyl-[acyl carrier protein] reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Miyano, M, Ago, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2007-05-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of TT0143 from Thermus thermophilus HB8
To be Published
2YXS
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BU of 2yxs by Molmil
Crystal Structure of N-terminal domain of human galectin-8 with D-lactose
Descriptor: Galectin-8 variant, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Kishishita, S, Nishino, A, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-27
Release date:2008-05-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal Structure of N-terminal domain of human galectin-8 with D-lactose
To be Published
2YY3
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BU of 2yy3 by Molmil
Crystal Structure of translation elongation factor EF-1 beta from Pyrococcus horikoshii
Descriptor: Elongation factor 1-beta
Authors:Ishii, T, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-27
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of translation elongation factor EF-1 beta from Pyrococcus horikoshii
To be Published
1WD7
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BU of 1wd7 by Molmil
Crystal Structure of Uroporphyrinogen III Synthase from an Extremely Thermophilic Bacterium Thermus thermophilus HB8 (Wild type, Native, Form-2 crystal)
Descriptor: Uroporphyrinogen III Synthase
Authors:Mizohata, E, Matsuura, T, Sakai, H, Murayama, K, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-12
Release date:2004-11-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Uroporphyrinogen III Synthase from an Extremely Thermophilic Bacterium Thermus thermophilus HB8 (Wild type, Native, Form-2 crystal)
to be published
2Z0L
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BU of 2z0l by Molmil
Crystal structure of EBV-DNA polymerase accessory protein BMRF1
Descriptor: CHLORIDE ION, Early antigen protein D
Authors:Murayama, K, Kato-Murayama, M, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2008-05-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of Epstein-Barr virus DNA polymerase processivity factor BMRF1
J.Biol.Chem., 284, 2009
1WF1
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BU of 1wf1 by Molmil
Solution structure of RRM domain in RNA-binding protein NP_057951
Descriptor: RNA-binding protein Raly
Authors:He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-25
Release date:2004-11-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of RRM domain in RNA-binding protein NP_057951
To be Published
1WFM
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BU of 1wfm by Molmil
The first C2 domain of human synaptotagmin XIII
Descriptor: synaptotagmin XIII
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-26
Release date:2004-11-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The first C2 domain of human synaptotagmin XIII
TO BE PUBLISHED
1WEZ
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BU of 1wez by Molmil
Solution structure of RRM domain in heterogeneous nuclear ribonucleoprotein H'
Descriptor: Heterogeneous nuclear ribonucleoprotein H'
Authors:He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-25
Release date:2004-11-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of RRM domain in heterogeneous nuclear ribonucleoprotein H'
To be Published
1WH9
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BU of 1wh9 by Molmil
Solution structure of the KH domain of human ribosomal protein S3
Descriptor: 40S ribosomal protein S3
Authors:Nameki, N, Tomizawa, T, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the KH domain of human ribosomal protein S3
To be Published
2YQE
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BU of 2yqe by Molmil
Solution structure of the ARID domain of JARID1D protein
Descriptor: Jumonji/ARID domain-containing protein 1D
Authors:Tanabe, W, Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2008-04-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the ARID domain of JARID1D protein
To be Published
2YRE
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Solution structure of the zinc finger domains (1-87) from human F-box only protein
Descriptor: F-box only protein 30, ZINC ION
Authors:Nagashima, T, Suetake, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-02
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the zinc finger domains (1-87) from human F-box only protein
To be Published
1WHB
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Solution structure of the Rhodanese-like domain in human ubiquitin specific protease 8 (UBP8)
Descriptor: KIAA0055
Authors:Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the Rhodanese-like domain in human ubiquitin specific protease 8 (UBP8)
To be Published

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