2YYE

Crystal structure of selenophosphate synthetase from Aquifex aeolicus complexed with AMPCPP

Summary for 2YYE

Related2E0B 2ZAU 2ZOD
DescriptorSelenide, water dikinase, COBALT (II) ION, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, ... (5 entities in total)
Functional Keywordsfull-length selenophosphate synthetase complex with atp-analog, structural genomics, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, transferase
Biological sourceAquifex aeolicus
Total number of polymer chains2
Total molecular weight77089.34
Authors
Itoh, Y.,Sekine, S.,Matsumoto, E.,Yokoyama, S.,RIKEN Structural Genomics/Proteomics Initiative (RSGI) (deposition date: 2007-04-29, release date: 2008-04-29, Last modification date: 2014-01-22)
Primary citation
Itoh, Y.,Sekine, S.,Matsumoto, E.,Akasaka, R.,Takemoto, C.,Shirouzu, M.,Yokoyama, S.
Structure of selenophosphate synthetase essential for selenium incorporation into proteins and RNAs
J.Mol.Biol., 385:1456-1469, 2009
PubMed: 18773910 (PDB entries with the same primary citation)
DOI: 10.1016/j.jmb.2008.08.042
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.1 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.172120.7%3.0%4.4%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation report