Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7JPL
DownloadVisualize
BU of 7jpl by Molmil
Rabbit Cav1.1 in the presence of 10 micromolar (S)-(-)-Bay K8644 in nanodiscs at 3.4 Angstrom resolution
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, ...
Authors:Yan, N, Gao, S.
Deposit date:2020-08-09
Release date:2020-11-18
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural Basis of the Modulation of the Voltage-Gated Calcium Ion Channel Ca v 1.1 by Dihydropyridine Compounds*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7JPK
DownloadVisualize
BU of 7jpk by Molmil
Rabbit Cav1.1 in the presence of 100 micromolar (S)-(-)-Bay K8644 in nanodiscs at 3.0 Angstrom resolution
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, ...
Authors:Yan, N, Gao, S.
Deposit date:2020-08-09
Release date:2020-11-18
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural Basis of the Modulation of the Voltage-Gated Calcium Ion Channel Ca v 1.1 by Dihydropyridine Compounds*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7JPV
DownloadVisualize
BU of 7jpv by Molmil
Rabbit Cav1.1 in the presence of 1 micromolar (S)-(-)-Bay K8644 in nanodiscs at 3.4 Angstrom resolution
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, ...
Authors:Yan, N, Gao, S.
Deposit date:2020-08-10
Release date:2020-11-18
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural Basis of the Modulation of the Voltage-Gated Calcium Ion Channel Ca v 1.1 by Dihydropyridine Compounds*.
Angew.Chem.Int.Ed.Engl., 60, 2021
7JPX
DownloadVisualize
BU of 7jpx by Molmil
Rabbit Cav1.1 in the presence of 100 micromolar amlodipine in nanodiscs at 2.9 Angstrom resolution
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
Authors:Yan, N, Gao, S.
Deposit date:2020-08-10
Release date:2020-11-18
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural Basis of the Modulation of the Voltage-Gated Calcium Ion Channel Ca v 1.1 by Dihydropyridine Compounds*.
Angew.Chem.Int.Ed.Engl., 60, 2021
6LQA
DownloadVisualize
BU of 6lqa by Molmil
voltage-gated sodium channel Nav1.5 with quinidine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Quinidine, Sodium channel protein type 5 subunit alpha
Authors:Yan, N, Li, Z, Pan, X, Huang, G.
Deposit date:2020-01-13
Release date:2021-03-24
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural Basis for Pore Blockade of the Human Cardiac Sodium Channel Na v 1.5 by the Antiarrhythmic Drug Quinidine*.
Angew.Chem.Int.Ed.Engl., 60, 2021
6N7G
DownloadVisualize
BU of 6n7g by Molmil
Cryo-EM structure of tetrameric Ptch1 in complex with ShhNp (form I)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Yan, N, Gong, X, Qian, H.W.
Deposit date:2018-11-27
Release date:2019-05-29
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:Inhibition of tetrameric Patched1 by Sonic Hedgehog through an asymmetric paradigm.
Nat Commun, 10, 2019
6N7H
DownloadVisualize
BU of 6n7h by Molmil
Cryo-EM structure of the 2:1 hPtch1-Shhp complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Yan, N, Gong, X, Qian, H.W.
Deposit date:2018-11-27
Release date:2019-05-29
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Inhibition of tetrameric Patched1 by Sonic Hedgehog through an asymmetric paradigm.
Nat Commun, 10, 2019
6N7K
DownloadVisualize
BU of 6n7k by Molmil
Cryo-EM structure of tetrameric Ptch1 in complex with ShhNp (form II)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Yan, N, Gong, X, Qian, H.W.
Deposit date:2018-11-27
Release date:2019-05-29
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Inhibition of tetrameric Patched1 by Sonic Hedgehog through an asymmetric paradigm.
Nat Commun, 10, 2019
4GC0
DownloadVisualize
BU of 4gc0 by Molmil
The structure of the MFS (major facilitator superfamily) proton:xylose symporter XylE bound to 6-bromo-6-deoxy-D-glucose
Descriptor: 6-bromo-6-deoxy-beta-D-glucopyranose, D-xylose-proton symporter, nonyl beta-D-glucopyranoside
Authors:Yan, N, Sun, L.F, Zeng, X, Yan, C.Y.
Deposit date:2012-07-28
Release date:2012-10-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a bacterial homologue of glucose transporters GLUT1-4.
Nature, 490, 2012
7W9M
DownloadVisualize
BU of 7w9m by Molmil
Cryo-EM structure of human Nav1.7(E406K) in complex with auxiliary beta subunits, ProTx-II and tetrodotoxin (S6IV pi helix conformer)
Descriptor: (1R,5R,6R,7R,9S,11S,12S,13S,14S)-3-amino-14-(hydroxymethyl)-8,10-dioxa-2,4-diazatetracyclo[7.3.1.1~7,11~.0~1,6~]tetradec-3-ene-5,9,12,13,14-pentol (non-preferred name), 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yan, N, Huang, G, Liu, D, Wei, P, Shen, H.
Deposit date:2021-12-10
Release date:2022-05-25
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3 Å)
Cite:High-resolution structures of human Na v 1.7 reveal gating modulation through alpha-pi helical transition of S6 IV.
Cell Rep, 39, 2022
7W9P
DownloadVisualize
BU of 7w9p by Molmil
Cryo-EM structure of human Nav1.7(E406K) in complex with auxiliary beta subunits, huwentoxin-IV and saxitoxin (S6IV pi helix conformer)
Descriptor: (2S,3R,4E)-2-(acetylamino)-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ...
Authors:Yan, N, Huang, G, Liu, D, Wei, P, Shen, H.
Deposit date:2021-12-10
Release date:2022-05-25
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:High-resolution structures of human Na v 1.7 reveal gating modulation through alpha-pi helical transition of S6 IV.
Cell Rep, 39, 2022
7W9T
DownloadVisualize
BU of 7w9t by Molmil
Cryo-EM structure of human Nav1.7(E406K) in complex with auxiliary beta subunits, huwentoxin-IV and saxitoxin (S6IV alpha helix conformer)
Descriptor: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ...
Authors:Yan, N, Huang, G, Liu, D, Wei, P.
Deposit date:2021-12-10
Release date:2022-05-25
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3 Å)
Cite:High-resolution structures of human Na v 1.7 reveal gating modulation through alpha-pi helical transition of S6 IV.
Cell Rep, 39, 2022
7W9L
DownloadVisualize
BU of 7w9l by Molmil
Cryo-EM structure of human Nav1.7(E406K)-beta1-beta2 complex
Descriptor: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ...
Authors:Yan, N, Huang, G, Liu, D, Wei, P, Shen, H.
Deposit date:2021-12-10
Release date:2022-06-01
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:High-resolution structures of human Na v 1.7 reveal gating modulation through alpha-pi helical transition of S6 IV.
Cell Rep, 39, 2022
7W9K
DownloadVisualize
BU of 7w9k by Molmil
Cryo-EM structure of human Nav1.7-beta1-beta2 complex at 2.2 angstrom resolution
Descriptor: (2S,3R,4E)-2-(acetylamino)-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ...
Authors:Yan, N, Huang, G, Liu, D, Wei, P, Shen, H.
Deposit date:2021-12-09
Release date:2022-06-01
Last modified:2025-06-18
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:High-resolution structures of human Na v 1.7 reveal gating modulation through alpha-pi helical transition of S6 IV.
Cell Rep, 39, 2022
7WFW
DownloadVisualize
BU of 7wfw by Molmil
Apo human Nav1.8
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yan, N, Pan, X.J, Huang, X.S, Huang, G.X.
Deposit date:2021-12-27
Release date:2022-08-03
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis for high-voltage activation and subtype-specific inhibition of human Na v 1.8.
Proc.Natl.Acad.Sci.USA, 119, 2022
7WFR
DownloadVisualize
BU of 7wfr by Molmil
Human Nav1.8 with A-803467, class III
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yan, N, Pan, X.J, Huang, X.S, Huang, G.X.
Deposit date:2021-12-27
Release date:2022-08-03
Last modified:2025-06-25
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis for high-voltage activation and subtype-specific inhibition of human Na v 1.8.
Proc.Natl.Acad.Sci.USA, 119, 2022
7WEL
DownloadVisualize
BU of 7wel by Molmil
Human Nav1.8 with A-803467, class II
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yan, N, Pan, X.J, Huang, X.S, Huang, G.X.
Deposit date:2021-12-23
Release date:2022-08-03
Last modified:2025-06-18
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis for high-voltage activation and subtype-specific inhibition of human Na v 1.8.
Proc.Natl.Acad.Sci.USA, 119, 2022
7WE4
DownloadVisualize
BU of 7we4 by Molmil
Human Nav1.8 with A-803467, class I
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yan, N, Pan, X.J, Huang, X.S, Huang, G.X.
Deposit date:2021-12-22
Release date:2022-08-03
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis for high-voltage activation and subtype-specific inhibition of human Na v 1.8.
Proc.Natl.Acad.Sci.USA, 119, 2022
8XMN
DownloadVisualize
BU of 8xmn by Molmil
Voltage-gated sodium channel Nav1.7 variant M2
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yan, N, Li, Z, Wu, Q, Huang, G.
Deposit date:2023-12-27
Release date:2024-03-06
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Dissection of the structure-function relationship of Na v channels.
Proc.Natl.Acad.Sci.USA, 121, 2024
8XMO
DownloadVisualize
BU of 8xmo by Molmil
Voltage-gated sodium channel Nav1.7 variant M4
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yan, N, Li, Z, Wu, Q, Huang, G.
Deposit date:2023-12-27
Release date:2024-03-06
Last modified:2024-11-27
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Dissection of the structure-function relationship of Na v channels.
Proc.Natl.Acad.Sci.USA, 121, 2024
8XMM
DownloadVisualize
BU of 8xmm by Molmil
Voltage-gated sodium channel Nav1.7 variant M9
Descriptor: (2S,3R,4E)-2-(acetylamino)-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ...
Authors:Yan, N, Li, Z, Wu, Q, Huang, G.
Deposit date:2023-12-27
Release date:2024-03-06
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Dissection of the structure-function relationship of Na v channels.
Proc.Natl.Acad.Sci.USA, 121, 2024
7DTC
DownloadVisualize
BU of 7dtc by Molmil
voltage-gated sodium channel Nav1.5-E1784K
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Sodium channel protein type 5 subunit alpha
Authors:Yan, N, Pan, X, Li, Z.
Deposit date:2021-01-04
Release date:2021-03-24
Last modified:2025-06-25
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of human Na v 1.5 reveals the fast inactivation-related segments as a mutational hotspot for the long QT syndrome.
Proc.Natl.Acad.Sci.USA, 118, 2021
7DTD
DownloadVisualize
BU of 7dtd by Molmil
Voltage-gated sodium channel Nav1.1 and beta4
Descriptor: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, Sodium channel protein type 1 subunit alpha, ...
Authors:Yan, N, Pan, X, Li, Z, Huang, G.
Deposit date:2021-01-04
Release date:2021-04-07
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Comparative structural analysis of human Na v 1.1 and Na v 1.5 reveals mutational hotspots for sodium channelopathies.
Proc.Natl.Acad.Sci.USA, 118, 2021
9L0Q
DownloadVisualize
BU of 9l0q by Molmil
The crystal structure of the beta-glucosidase Ks5A7
Descriptor: Beta-glucosidase Ks5A7
Authors:Xie, W, Yang, N.
Deposit date:2024-12-12
Release date:2025-06-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Rational design on the beta-glucosidase Ks5A7 reveals a hidden site for improved enzymatic performance
Food Biosci, 68, 2025
9CUM
DownloadVisualize
BU of 9cum by Molmil
Q67H mutant of R67 DHFR complexed with Congo Red
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, Dihydrofolate reductase type 2, ...
Authors:Narayana, N, Narendra, A.N.
Deposit date:2024-07-26
Release date:2025-02-19
Last modified:2025-02-26
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structure of the plasmid-encoded R67 dihydrofolate reductase complexed with Congo red an amyloid binding dye.
Sci Rep, 15, 2025

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon