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8W75
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BU of 8w75 by Molmil
Structure of Drosophila melanogaster L-2-hydroxyglutarate dehydrogenase
Descriptor: DODECYL-BETA-D-MALTOSIDE, FI05204p, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Yang, J, Chen, X, Jin, S, Ding, J.
Deposit date:2023-08-30
Release date:2023-11-29
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure and biochemical characterization of l-2-hydroxyglutarate dehydrogenase and its role in the pathogenesis of l-2-hydroxyglutaric aciduria.
J.Biol.Chem., 300, 2023
8W7F
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BU of 8w7f by Molmil
Structure of Drosophila melanogaster L-2-hydroxyglutarate dehydrogenase bound with FAD and a sulfate ion
Descriptor: DODECYL-BETA-D-MALTOSIDE, FI05204p, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Yang, J, Chen, X, Jin, S, Ding, J.
Deposit date:2023-08-30
Release date:2023-11-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:Structure and biochemical characterization of l-2-hydroxyglutarate dehydrogenase and its role in the pathogenesis of l-2-hydroxyglutaric aciduria.
J.Biol.Chem., 300, 2023
8W78
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BU of 8w78 by Molmil
Structure of Drosophila melanogaster L-2-hydroxyglutarate dehydrogenase in complex with FAD and 2-oxoglutarate
Descriptor: 2-OXOGLUTARIC ACID, DODECYL-BETA-D-MALTOSIDE, FI05204p, ...
Authors:Yang, J, Chen, X, Jin, S, Ding, J.
Deposit date:2023-08-30
Release date:2023-11-29
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structure and biochemical characterization of l-2-hydroxyglutarate dehydrogenase and its role in the pathogenesis of l-2-hydroxyglutaric aciduria.
J.Biol.Chem., 300, 2023
8K4S
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BU of 8k4s by Molmil
CryoEM structure of Gq coupled MRGPRX4 with agonist DCA-3P
Descriptor: (4~{R})-4-[(3~{R},5~{R},8~{R},9~{S},10~{S},12~{S},13~{R},14~{S},17~{R})-10,13-dimethyl-12-oxidanyl-3-phosphonooxy-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-17-yl]pentanoic acid, Gs-mini-Gq chimera, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Yang, J, Fan, J.P, Lei, X.G.
Deposit date:2023-07-20
Release date:2024-11-06
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure-guided discovery of bile acid derivatives for treating liver diseases without causing itch.
Cell, 2024
8KEX
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BU of 8kex by Molmil
CryoEM structure of Gq coupled MRGPRX4 with agonist DCA-3P, local
Descriptor: (4~{R})-4-[(3~{R},5~{R},8~{R},9~{S},10~{S},12~{S},13~{R},14~{S},17~{R})-10,13-dimethyl-12-oxidanyl-3-phosphonooxy-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-17-yl]pentanoic acid, Soluble cytochrome b562,Mas-related G-protein coupled receptor member X4,Green fluorescent protein
Authors:Yang, J, Fan, J.P, Lei, X.G.
Deposit date:2023-08-14
Release date:2024-11-06
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure-guided discovery of bile acid derivatives for treating liver diseases without causing itch.
Cell, 2024
8XHO
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BU of 8xho by Molmil
Deep sea bacterial PET plastic hydrolase MtCut with mutation S178C
Descriptor: CALCIUM ION, PET plastic hydrolase
Authors:Yang, J.
Deposit date:2023-12-18
Release date:2024-04-03
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Deep sea bacterial PET plastic hydrolase MtCut with mutation S178C
To Be Published
8ZKC
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BU of 8zkc by Molmil
iron-sulfur cluster transfer protein ApbC
Descriptor: GLYCEROL, Iron-sulfur cluster carrier protein, MAGNESIUM ION
Authors:Yang, J, Liu, L.
Deposit date:2024-05-16
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of the iron-sulfur cluster transfer protein ApbC from Escherichia coli.
Biochem.Biophys.Res.Commun., 722, 2024
8XBD
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BU of 8xbd by Molmil
GH18 family chitinase from cold seep metagenome
Descriptor: GH18 chitinase-like superfamily protein
Authors:Yang, J.
Deposit date:2023-12-06
Release date:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:GH18 family chitinase from cold seep metagenome
To Be Published
5YOX
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BU of 5yox by Molmil
HD domain-containing protein YGK1(YGL101W)
Descriptor: HD domain-containing protein YGL101W, ZINC ION
Authors:Yang, J, Wang, F, Gao, Z, Zhou, K, Liu, Q.
Deposit date:2017-10-31
Release date:2018-11-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:HD domain-containing protein YGK1(YGL101W)
To Be Published
8IOM
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BU of 8iom by Molmil
Crystal structure of the carboxy-terminal channel-forming domain of Colicin Ib
Descriptor: Colicin 1B
Authors:Yang, J, Hu, N.J.
Deposit date:2023-03-12
Release date:2023-04-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of colicin Ib Channel domain at 3.0 Angstroms resolution
To Be Published
8XRH
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BU of 8xrh by Molmil
The crystal structure of AsfvTopII ATPase domain in complex with AMPPNP
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA topoisomerase 2, MAGNESIUM ION, ...
Authors:Yang, J, Gan, J.H.
Deposit date:2024-01-07
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The crystal structure of AsfvTopII ATPase domain in complex with AMPPNP
Nat Commun, 2024
8XRI
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BU of 8xri by Molmil
The crystal structure of AsfvTopII in complex with both G-DNA and T-DNA
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (56-MER), DNA topoisomerase 2, ...
Authors:Yang, J, Gan, J.H.
Deposit date:2024-01-07
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:The crystal structure of AsfvTopII in complex with both G-DNA and T-DNA
Nat Commun, 2024
8XRG
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BU of 8xrg by Molmil
The crystal structure of AsfvTopII ATPase domain in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA topoisomerase 2, MAGNESIUM ION, ...
Authors:Yang, J, Gan, J.H.
Deposit date:2024-01-07
Release date:2024-08-07
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:The crystal structure of AsfvTopII ATPase domain in complex with ADP
Nat Commun, 2024
8XRF
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BU of 8xrf by Molmil
The crystal structure of AsfvTopII in complex with G-DNA
Descriptor: DNA (52-MER), DNA topoisomerase 2, MAGNESIUM ION
Authors:Yang, J, Gan, J.H.
Deposit date:2024-01-07
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:The crystal structure of AsfvTopII in complex with G-DNA
Nat Commun, 2024
7YP0
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BU of 7yp0 by Molmil
Crystal structure of CtGST
Descriptor: Glutathione S-transferase
Authors:Yang, J, Fan, J.P, Lei, X.G.
Deposit date:2022-08-02
Release date:2024-02-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Enzymatic Degradation of Deoxynivalenol with the Engineered Detoxification Enzyme Fhb7.
Jacs Au, 4, 2024
7YOC
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BU of 7yoc by Molmil
Crystal structure of Fhb7
Descriptor: Fhb7
Authors:Yang, J, Liang, K, Xiao, J.Y, Lei, X.G.
Deposit date:2022-08-01
Release date:2024-02-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Enzymatic Degradation of Deoxynivalenol with the Engineered Detoxification Enzyme Fhb7.
Jacs Au, 4, 2024
7CCB
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BU of 7ccb by Molmil
Crystal structure of the SPRY domain-containing protein 7 (SPRY7)
Descriptor: SPRY domain-containing protein 7
Authors:Yang, J, Kuang, Z.
Deposit date:2020-06-16
Release date:2020-10-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal structure of the SPRY domain-containing protein 7 reveals unique structural features.
Biochem.Biophys.Res.Commun., 531, 2020
7ECC
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BU of 7ecc by Molmil
M4 family peptidase PlM4P-mature form
Descriptor: CALCIUM ION, M4 family peptidase, PHOSPHATE ION, ...
Authors:Yang, J.
Deposit date:2021-03-12
Release date:2021-04-28
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:M4 family peptidase PlM4P-mature form
To Be Published
7E5C
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BU of 7e5c by Molmil
Bacterial prolidase mutant D45W/L225Y/H226L/H343I
Descriptor: MANGANESE (II) ION, Xaa-Pro dipeptidase
Authors:Yang, J.
Deposit date:2021-02-18
Release date:2021-03-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structure-based redesign of the bacterial prolidase active-site pocket for efficient enhancement of methyl-parathion hydrolysis
Catalysis Science And Technology, 11, 2021
7F0Z
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BU of 7f0z by Molmil
Crystal structure of NsrQ W31A
Descriptor: NsrQ
Authors:Yang, J, Mori, T, Abe, I.
Deposit date:2021-06-07
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Isomerization Reactions in Fungal Tetrahydroxanthone Biosynthesis and Diversification.
Angew.Chem.Int.Ed.Engl., 60, 2021
7F11
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BU of 7f11 by Molmil
Crystal structure of NsrQ M128I in complex with substrate analogue 7
Descriptor: NsrQ, methyl 2-[2,6-bis(oxidanyl)phenyl]carbonyl-5-methyl-3,6-bis(oxidanyl)benzoate
Authors:Yang, J, Mori, T, Abe, I.
Deposit date:2021-06-07
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis for Isomerization Reactions in Fungal Tetrahydroxanthone Biosynthesis and Diversification.
Angew.Chem.Int.Ed.Engl., 60, 2021
7F0Y
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BU of 7f0y by Molmil
Crystal structure of isomerase NsrQ F58A in complex with substrate analogue
Descriptor: NsrQ, methyl 2-[2,6-bis(oxidanyl)phenyl]carbonyl-5-methyl-3-oxidanyl-benzoate
Authors:Yang, J, Mori, T, Abe, I.
Deposit date:2021-06-07
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis for Isomerization Reactions in Fungal Tetrahydroxanthone Biosynthesis and Diversification.
Angew.Chem.Int.Ed.Engl., 60, 2021
7F13
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BU of 7f13 by Molmil
Crystal structure of isomerase Dcr3
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Dcr3
Authors:Yang, J, Mori, T, Abe, I.
Deposit date:2021-06-07
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Basis for Isomerization Reactions in Fungal Tetrahydroxanthone Biosynthesis and Diversification.
Angew.Chem.Int.Ed.Engl., 60, 2021
7F14
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BU of 7f14 by Molmil
Crystal structure of isomerase Dcr3 complex with substrate analogue 3
Descriptor: Dcr3, methyl 2-[2,6-bis(oxidanyl)phenyl]carbonyl-5-methyl-3-oxidanyl-benzoate
Authors:Yang, J, Mori, T, Abe, I.
Deposit date:2021-06-07
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for Isomerization Reactions in Fungal Tetrahydroxanthone Biosynthesis and Diversification.
Angew.Chem.Int.Ed.Engl., 60, 2021
7F0O
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BU of 7f0o by Molmil
Crystal structure of selenomethionine-labeled isomerase NsrQ
Descriptor: NsrQ
Authors:Yang, J, Mori, T, Abe, I.
Deposit date:2021-06-06
Release date:2022-04-20
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for Isomerization Reactions in Fungal Tetrahydroxanthone Biosynthesis and Diversification.
Angew.Chem.Int.Ed.Engl., 60, 2021

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PDB entries from 2024-11-13

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