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4RF9
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BU of 4rf9 by Molmil
Crystal structure of double-domain arginine kinase from Anthopleura japonicas in complex with L-arginine and ATPgS
Descriptor: ACETATE ION, ARGININE, Arginine kinase, ...
Authors:Wang, Z, Qiao, Z, Ye, S, Zhang, R.
Deposit date:2014-09-25
Release date:2015-04-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of a double-domain phosphagen kinase reveals an asymmetric arrangement of the tandem domains.
Acta Crystallogr.,Sect.D, 71, 2015
3V3L
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BU of 3v3l by Molmil
Crystal structure of human RNF146 WWE domain in complex with iso-ADPRibose
Descriptor: 2'-O-(5-O-phosphono-alpha-D-ribofuranosyl)adenosine 5'-(dihydrogen phosphate), E3 ubiquitin-protein ligase RNF146
Authors:Wang, Z, Cheng, Z, Xu, W.
Deposit date:2011-12-13
Release date:2012-02-15
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Recognition of the iso-ADP-ribose moiety in poly(ADP-ribose) by WWE domains suggests a general mechanism for poly(ADP-ribosyl)ation-dependent ubiquitination.
Genes Dev., 26, 2012
4FC2
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BU of 4fc2 by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain
Descriptor: Poly(ADP-ribose) glycohydrolase, SULFATE ION
Authors:Wang, Z, Cheng, Z, Xu, W.
Deposit date:2012-05-23
Release date:2012-06-06
Last modified:2018-10-17
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
PLoS ONE, 9, 2014
4NA5
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BU of 4na5 by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain mutant E748N
Descriptor: Poly(ADP-ribose) glycohydrolase, SULFATE ION
Authors:Wang, Z, Cheng, Z, Xu, W.
Deposit date:2013-10-21
Release date:2014-01-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
Plos One, 9, 2014
4NA0
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BU of 4na0 by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain with ADPRibose
Descriptor: IODIDE ION, Poly(ADP-ribose) glycohydrolase, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Wang, Z, Cheng, Z, Xu, W.
Deposit date:2013-10-21
Release date:2014-01-29
Last modified:2014-09-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
Plos One, 9, 2014
4N9Y
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BU of 4n9y by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain mutant E748Q
Descriptor: 2'-O-(5-O-phosphono-alpha-D-ribofuranosyl)adenosine 5'-(dihydrogen phosphate), Poly(ADP-ribose) glycohydrolase, SULFATE ION
Authors:Wang, Z, Cheng, Z, Xu, W.
Deposit date:2013-10-21
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
Plos One, 9, 2014
4N9Z
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BU of 4n9z by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain mutant E749Q
Descriptor: 2'-O-(5-O-phosphono-alpha-D-ribofuranosyl)adenosine 5'-(dihydrogen phosphate), Poly(ADP-ribose) glycohydrolase, SULFATE ION
Authors:Wang, Z, Cheng, Z, Xu, W.
Deposit date:2013-10-21
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
Plos One, 9, 2014
4NA6
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BU of 4na6 by Molmil
Crystal structure of mouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain mutant E749N
Descriptor: Poly(ADP-ribose) glycohydrolase, SULFATE ION
Authors:Wang, Z, Cheng, Z, Xu, W.
Deposit date:2013-10-21
Release date:2014-01-29
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Crystallographic and biochemical analysis of the mouse poly(ADP-ribose) glycohydrolase.
Plos One, 9, 2014
5V5S
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BU of 5v5s by Molmil
multi-drug efflux; membrane transport; RND superfamily; Drug resistance
Descriptor: Multidrug efflux pump subunit AcrA, Multidrug efflux pump subunit AcrB, Outer membrane protein TolC
Authors:wang, Z, fan, G, Hryc, C.F, Blaza, J.N, Serysheva, I.I, Schmid, M.F, Chiu, W, Luisi, B.F, Du, D.
Deposit date:2017-03-15
Release date:2017-04-19
Last modified:2019-10-23
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:An allosteric transport mechanism for the AcrAB-TolC Multidrug Efflux Pump.
Elife, 6, 2017
4KVC
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BU of 4kvc by Molmil
2H2 Fab fragment of immature Dengue virus
Descriptor: Ig heavy chain V region MOPC 21, Igh protein, Ig kappa chain V-V region MOPC 21, ...
Authors:Wang, Z, Rossmann, M.G.
Deposit date:2013-05-22
Release date:2013-07-24
Last modified:2017-08-02
Method:X-RAY DIFFRACTION (2.306 Å)
Cite:Obstruction of Dengue Virus Maturation by Fab Fragments of the 2H2 Antibody.
J.Virol., 87, 2013
4L9A
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BU of 4l9a by Molmil
Crystal structure of Smu.1393c from cariogenic pathogen Streptococcus mutans
Descriptor: GLYCEROL, Putative uncharacterized protein Smu.1393c
Authors:Wang, Z, Li, L, Su, X.-D.
Deposit date:2013-06-18
Release date:2013-07-17
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional characterization of a novel alpha / beta hydrolase from cariogenic pathogen Streptococcus mutans.
Proteins, 82, 2014
4F8Y
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BU of 4f8y by Molmil
Complex structure of NADPH:quinone oxidoreductase with menadione in Streptococcus mutans
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, MENADIONE, NADPH Quinone Oxidoreductase
Authors:Wang, Z, Li, L, Su, X.-D.
Deposit date:2012-05-18
Release date:2012-06-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.796 Å)
Cite:Complex structure of NADPH:quinone oxidoreductase with menadione in Streptococcus mutans
TO BE PUBLISHED
4H10
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BU of 4h10 by Molmil
Intermolecular recognition revealed by the complex structure of human CLOCK-BMAL1 basic Helix-Loop-Helix domains with E-box DNA
Descriptor: Aryl hydrocarbon receptor nuclear translocator-like protein 1, Circadian locomoter output cycles protein kaput, E-box DNA antisense strand, ...
Authors:Wang, Z, Su, X.-D.
Deposit date:2012-09-10
Release date:2012-12-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.402 Å)
Cite:Intermolecular recognition revealed by the complex structure of human CLOCK-BMAL1 basic helix-loop-helix domains with E-box DNA.
Cell Res., 23, 2013
4Q2J
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BU of 4q2j by Molmil
A novel structure-based mechanism for DNA-binding of SATB1
Descriptor: DNA-binding protein SATB1
Authors:Wang, Z, Long, J, Yang, X, Shen, Y.
Deposit date:2014-04-08
Release date:2015-03-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.603 Å)
Cite:Crystal structure of the ubiquitin-like domain-CUT repeat-like tandem of special AT-rich sequence binding protein 1 (SATB1) reveals a coordinating DNA-binding mechanism.
J.Biol.Chem., 289, 2014
7KH1
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BU of 7kh1 by Molmil
Baseplate Complex for Myoviridae Phage XM1
Descriptor: baseplate organization protein, gp11, baseplate stabilizing protein, ...
Authors:Wang, Z, Klose, T, Jiang, W, Kuhn, R.J.
Deposit date:2020-10-19
Release date:2021-10-27
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of Vibrio phage XM1, a simple contractile DNA injection machine
Biorxiv, 2021
7KLN
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BU of 7kln by Molmil
Myoviridae Phage XM1 Neck Region (12-fold)
Descriptor: Head completion protein, gp1, Portal protein
Authors:Wang, Z, Klose, T, Jiang, W, Kuhn, R.J.
Deposit date:2020-10-30
Release date:2021-11-03
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of Vibrio phage XM1, a simple contractile DNA injection machine
Biorxiv, 2021
7KJK
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BU of 7kjk by Molmil
The Neck region of Phage XM1 (6-fold symmetry)
Descriptor: Collar spike protein, Head completion protein, Tail sheath protein, ...
Authors:Wang, Z, Klose, T, Jiang, W, Kuhn, R.J.
Deposit date:2020-10-26
Release date:2021-11-03
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of Vibrio phage XM1, a simple contractile DNA injection machine
Biorxiv, 2021
7KMX
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BU of 7kmx by Molmil
The capsid of Myoviridae Phage XM1
Descriptor: Major capsid protein, Minor capsid protein
Authors:Wang, Z, Klose, T, Jiang, W, Kuhn, R.J.
Deposit date:2020-11-03
Release date:2021-11-10
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of Vibrio phage XM1, a simple contractile DNA injection machine
Biorxiv, 2021
3TUO
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BU of 3tuo by Molmil
Crystal structure of N-terminal domain of DNA-binding protein satb1
Descriptor: DNA-binding protein SATB1
Authors:Wang, Z, Yang, X, Long, J, Shen, Y.
Deposit date:2011-09-17
Release date:2012-02-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.697 Å)
Cite:The structural basis for the oligomerization of the N-terminal domain of SATB1
Nucleic Acids Res., 40, 2012
6J71
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BU of 6j71 by Molmil
HuA21-scFv in complex with the extracellular domain(ECD) of HER2
Descriptor: Receptor tyrosine-protein kinase erbB-2, anti-HER2 humanized antibody HuA21, beta-D-mannopyranose, ...
Authors:Wang, Z, Guo, G, Cheng, B, Zhu, Z, Niu, L, Zhang, H.
Deposit date:2019-01-16
Release date:2019-02-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.918 Å)
Cite:Structural insight into a matured humanized monoclonal antibody HuA21 against HER2-overexpressing cancer cells.
Acta Crystallogr D Struct Biol, 75, 2019
2LUP
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BU of 2lup by Molmil
RDC refined solution structure of double-stranded RNA binding domain of S. cerevisiae RNase III (rnt1p) in complex with the terminal RNA hairpin of snr47 precursor
Descriptor: RNA (32-MER), Ribonuclease 3
Authors:Wang, Z, Feigon, J.
Deposit date:2012-06-19
Release date:2012-07-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of a yeast RNase III dsRBD complex with a noncanonical RNA substrate provides new insights into binding specificity of dsRBDs.
Structure, 19, 2011
2NRU
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BU of 2nru by Molmil
Crystal structure of IRAK-4
Descriptor: 1-(3-HYDROXYPROPYL)-2-[(3-NITROBENZOYL)AMINO]-1H-BENZIMIDAZOL-5-YL PIVALATE, Interleukin-1 receptor-associated kinase 4, SULFATE ION
Authors:Wang, Z, Liu, J, Walker, N.P.C.
Deposit date:2006-11-02
Release date:2006-12-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of IRAK-4 kinase in complex with inhibitors: a serine/threonine kinase with tyrosine as a gatekeeper.
Structure, 14, 2006
2NRY
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BU of 2nry by Molmil
Crystal structure of IRAK-4
Descriptor: STAUROSPORINE, interleukin-1 receptor-associated kinase 4
Authors:Wang, Z, Liu, J, Walker, N.P.C.
Deposit date:2006-11-02
Release date:2006-12-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structures of IRAK-4 kinase in complex with inhibitors: a serine/threonine kinase with tyrosine as a gatekeeper.
Structure, 14, 2006
2LBS
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BU of 2lbs by Molmil
Solution structure of double-stranded RNA binding domain of S. cerevisiae RNase III (Rnt1p) in complex with AAGU tetraloop hairpin
Descriptor: RNA (32-MER), Ribonuclease 3
Authors:Wang, Z, Hartman, E, Roy, K, Chanfreau, G, Feigon, J.
Deposit date:2011-04-06
Release date:2011-08-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of a Yeast RNase III dsRBD Complex with a Noncanonical RNA Substrate Provides New Insights into Binding Specificity of dsRBDs.
Structure, 19, 2011
8TVG
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BU of 8tvg by Molmil
Langya henipavirus postfusion F protein in complex with the 4G5 Fab, local refinement of the viral membrane distal region
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Langya henipavirus postfusion F protein
Authors:Wang, Z, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
Deposit date:2023-08-18
Release date:2024-05-08
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure and design of Langya virus glycoprotein antigens.
Proc.Natl.Acad.Sci.USA, 121, 2024

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