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8DN2
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BU of 8dn2 by Molmil
Cryo-EM structure of human Glycine Receptor alpha1-beta heteromer, glycine-bound state 2(expanded open)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DECANE, GLYCINE, ...
Authors:Liu, X, Wang, W.
Deposit date:2022-07-10
Release date:2023-10-11
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Asymmetric gating of a human hetero-pentameric glycine receptor.
Nat Commun, 14, 2023
8DN5
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BU of 8dn5 by Molmil
Cryo-EM structure of human Glycine Receptor alpha1-beta heteromer, glycine-bound state1(open state)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DECANE, GLYCINE, ...
Authors:Liu, X, Wang, W.
Deposit date:2022-07-10
Release date:2023-10-11
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.63 Å)
Cite:Asymmetric gating of a human hetero-pentameric glycine receptor.
Nat Commun, 14, 2023
8DN3
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BU of 8dn3 by Molmil
Cryo-EM structure of human Glycine Receptor alpha1-beta heteromer, apo state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, DECANE, ...
Authors:Liu, X, Wang, W.
Deposit date:2022-07-10
Release date:2023-10-11
Last modified:2023-11-01
Method:ELECTRON MICROSCOPY (3.55 Å)
Cite:Asymmetric gating of a human hetero-pentameric glycine receptor.
Nat Commun, 14, 2023
8DN4
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BU of 8dn4 by Molmil
Cryo-EM structure of human Glycine Receptor alpha-1 beta heteromer, glycine-bound state3(desensitized state)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycine receptor subunit alpha-1, Glycine receptor subunit beta,Green fluorescent protein,Glycine receptor beta, ...
Authors:Liu, X, Wang, W.
Deposit date:2022-07-10
Release date:2023-10-11
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Asymmetric gating of a human hetero-pentameric glycine receptor.
Nat Commun, 14, 2023
6N48
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BU of 6n48 by Molmil
Structure of beta2 adrenergic receptor bound to BI167107, Nanobody 6B9, and a positive allosteric modulator
Descriptor: (2S)-2,3-dihydroxypropyl (7Z)-tetradec-7-enoate, 8-[(1R)-2-{[1,1-dimethyl-2-(2-methylphenyl)ethyl]amino}-1-hydroxyethyl]-5-hydroxy-2H-1,4-benzoxazin-3(4H)-one, Camelid Antibody Fragment, ...
Authors:Liu, X, Masoudi, A, Kahsai, A.W, Huang, L.Y, Pani, B, Hirata, K, Ahn, S, Lefkowitz, R.J, Kobilka, B.K.
Deposit date:2018-11-17
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Mechanism of beta2AR regulation by an intracellular positive allosteric modulator.
Science, 364, 2019
6NWL
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BU of 6nwl by Molmil
Structure of the Ancestral Glucocorticoid Receptor 2 ligand binding domain in complex with hydrocortisone and PGC1a coregulator fragment
Descriptor: (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ...
Authors:Liu, X, Ortlund, E.A.
Deposit date:2019-02-06
Release date:2019-10-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.595 Å)
Cite:First High-Resolution Crystal Structures of the Glucocorticoid Receptor Ligand-Binding Domain-Peroxisome Proliferator-ActivatedgammaCoactivator 1-alphaComplex with Endogenous and Synthetic Glucocorticoids.
Mol.Pharmacol., 96, 2019
6NWK
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BU of 6nwk by Molmil
Structure of the Ancestral Glucocorticoid Receptor 2 ligand binding domain in complex with dexamethasone and PGC1a coregulator fragment
Descriptor: ACETYL GROUP, DEXAMETHASONE, DIMETHYL SULFOXIDE, ...
Authors:Liu, X, Ortlund, E.A.
Deposit date:2019-02-06
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:First High-Resolution Crystal Structures of the Glucocorticoid Receptor Ligand-Binding Domain-Peroxisome Proliferator-ActivatedgammaCoactivator 1-alphaComplex with Endogenous and Synthetic Glucocorticoids.
Mol.Pharmacol., 96, 2019
8GUD
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BU of 8gud by Molmil
Cryo-EM structure of cancer-specific PI3Kalpha mutant E545K in complex with BYL-719
Descriptor: (2S)-N~1~-{4-methyl-5-[2-(1,1,1-trifluoro-2-methylpropan-2-yl)pyridin-4-yl]-1,3-thiazol-2-yl}pyrrolidine-1,2-dicarboxamide, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Liu, X, Zhou, Q, Hart, J.R, Xu, Y, Yang, S, Yang, D, Vogt, P.K, Wang, M.-W.
Deposit date:2022-09-11
Release date:2022-11-23
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.62 Å)
Cite:Cryo-EM structures of cancer-specific helical and kinase domain mutations of PI3K alpha.
Proc.Natl.Acad.Sci.USA, 119, 2022
8GUB
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BU of 8gub by Molmil
Cryo-EM structure of cancer-specific PI3Kalpha mutant H1047R in complex with BYL-719
Descriptor: (2S)-N~1~-{4-methyl-5-[2-(1,1,1-trifluoro-2-methylpropan-2-yl)pyridin-4-yl]-1,3-thiazol-2-yl}pyrrolidine-1,2-dicarboxamide, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Liu, X, Zhou, Q, Hart, J.R, Xu, Y, Yang, S, Yang, D, Vogt, P.K, Wang, M.-W.
Deposit date:2022-09-11
Release date:2022-11-23
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:Cryo-EM structures of cancer-specific helical and kinase domain mutations of PI3K alpha.
Proc.Natl.Acad.Sci.USA, 119, 2022
8GUA
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BU of 8gua by Molmil
Cryo-EM structure of cancer-specific PI3Kalpha mutant E542K in complex with BYL-719
Descriptor: (2S)-N~1~-{4-methyl-5-[2-(1,1,1-trifluoro-2-methylpropan-2-yl)pyridin-4-yl]-1,3-thiazol-2-yl}pyrrolidine-1,2-dicarboxamide, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Liu, X, Zhou, Q, Hart, J.R, Xu, Y, Yang, S, Yang, D, Vogt, P.K, Wang, M.-W.
Deposit date:2022-09-11
Release date:2022-12-07
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:Cryo-EM structures of cancer-specific helical and kinase domain mutations of PI3K alpha.
Proc.Natl.Acad.Sci.USA, 119, 2022
5F72
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BU of 5f72 by Molmil
De novo design and crystallographic validation of antibodies targeting a pre-selected epitope
Descriptor: Kelch-like ECH-associated protein 1, Single chain Fv from a Fab
Authors:Liu, X, Taylor, R.D, Griffin, L, Coker, S, Adams, R, Ceska, T, Shi, J, Lawson, A.D.G, Baker, T.
Deposit date:2015-12-07
Release date:2016-12-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:De novo design and crystallographic validation of antibodies targeting a pre-selected epitope
To Be Published
7SPC
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BU of 7spc by Molmil
Models for C17 reconstruction of Outer Membrane Core Complex (OMCC) of Type IV Secretion System (T4SS) encoded by F-plasmid (pED208).
Descriptor: TraB, TraV
Authors:Liu, X, Khara, P, Baker, M.L, Christie, P.J, Hu, B.
Deposit date:2021-11-02
Release date:2022-02-02
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Structure of a type IV secretion system core complex encoded by multi-drug resistance F plasmids
Nat Commun, 13, 2022
7SPJ
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BU of 7spj by Molmil
Models for C17 reconstruction of Outer Membrane Core Complex (OMCC) of Type IV Secretion System (T4SS) encoded by a plasmid overproducing TraV, TraK and TraB of pED208
Descriptor: TraB, TraV
Authors:Liu, X, Khara, P, Baker, M.L, Christie, P.J, Hu, B.
Deposit date:2021-11-02
Release date:2022-02-02
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.56 Å)
Cite:Structure of a type IV secretion system core complex encoded by multi-drug resistance F plasmids
Nat Commun, 13, 2022
7SPI
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BU of 7spi by Molmil
Models for C13 reconstruction of Outer Membrane Core Complex (OMCC) of Type IV Secretion System (T4SS) encoded by a plasmid overproducing TraV, TraK and TraB of pED208
Descriptor: TraB, TraK, TraV
Authors:Liu, X, Khara, P, Baker, M.L, Christie, P.J, Hu, B.
Deposit date:2021-11-02
Release date:2022-02-02
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Structure of a type IV secretion system core complex encoded by multi-drug resistance F plasmids
Nat Commun, 13, 2022
7SPK
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BU of 7spk by Molmil
Models for C16 reconstruction of Outer Membrane Core Complex (OMCC) of Type IV Secretion System (T4SS) encoded by a plasmid overproducing TraV, TraK and TraB of pED208
Descriptor: TraB, TraV
Authors:Liu, X, Khara, P, Baker, M.L, Christie, P.J, Hu, B.
Deposit date:2021-11-02
Release date:2022-02-02
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of a type IV secretion system core complex encoded by multi-drug resistance F plasmids
Nat Commun, 13, 2022
7SPB
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BU of 7spb by Molmil
Models for C13 reconstruction of Outer Membrane Core Complex (OMCC) of Type IV Secretion System (T4SS) encoded by F-plasmid (pED208).
Descriptor: TraB, TraK, TraV
Authors:Liu, X, Khara, P, Baker, M.L, Christie, P.J, Hu, B.
Deposit date:2021-11-02
Release date:2022-02-02
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.31 Å)
Cite:Structure of a type IV secretion system core complex encoded by multi-drug resistance F plasmids
Nat Commun, 13, 2022
3O72
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BU of 3o72 by Molmil
Crystal structure of EfeB in complex with heme
Descriptor: OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, Redox component of a tripartite ferrous iron transporter
Authors:Liu, X, Du, Q, Wang, Z, Zhu, D, Huang, Y, Li, N, Xu, S, Gu, L.
Deposit date:2010-07-30
Release date:2011-03-16
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure and biochemical features of EfeB/YcdB from Escherichia coli O157: ASP235 plays divergent roles in different enzyme-catalyzed processes
J.Biol.Chem., 286, 2011
6AAX
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BU of 6aax by Molmil
Crystal structure of TFB1M and h45 with SAM in homo sapiens
Descriptor: DI(HYDROXYETHYL)ETHER, Dimethyladenosine transferase 1, mitochondrial, ...
Authors:Liu, X, Shen, S, Wu, P, Li, F, Gong, Q, Wu, J, Zhang, H, Shi, Y.
Deposit date:2018-07-19
Release date:2019-06-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.994 Å)
Cite:Structural insights into dimethylation of 12S rRNA by TFB1M: indispensable role in translation of mitochondrial genes and mitochondrial function.
Nucleic Acids Res., 47, 2019
6AAU
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BU of 6aau by Molmil
Solution Structure for m62A helix 45 in 3' end of 12S rRNA
Descriptor: RNA (24-mer)
Authors:Liu, X, Wu, P.
Deposit date:2018-07-19
Release date:2019-06-05
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural insights into dimethylation of 12S rRNA by TFB1M: indispensable role in translation of mitochondrial genes and mitochondrial function.
Nucleic Acids Res., 47, 2019
7U1A
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BU of 7u1a by Molmil
RFC:PCNA bound to dsDNA with a ssDNA gap of six nucleotides
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA - Primer, DNA - Template, ...
Authors:Liu, X, Gaubitz, C, Pajak, J, Kelch, B.A.
Deposit date:2022-02-20
Release date:2022-07-06
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:A second DNA binding site on RFC facilitates clamp loading at gapped or nicked DNA.
Elife, 11, 2022
6AJK
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BU of 6ajk by Molmil
Crystal structure of TFB1M and h45 in homo sapiens
Descriptor: Dimethyladenosine transferase 1, mitochondrial, RNA (28-MER)
Authors:Liu, X, Shen, S, Wu, P, Li, F, Wang, C, Gong, Q, Wu, J, Zhang, H, Shi, Y.
Deposit date:2018-08-28
Release date:2019-06-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.001 Å)
Cite:Structural insights into dimethylation of 12S rRNA by TFB1M: indispensable role in translation of mitochondrial genes and mitochondrial function.
Nucleic Acids Res., 47, 2019
6AAS
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BU of 6aas by Molmil
Solution Structure for helix 45 in 3' end of 12S rRNA
Descriptor: RNA (28-MER)
Authors:Liu, X, Wu, P.
Deposit date:2018-07-19
Release date:2019-06-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural insights into dimethylation of 12S rRNA by TFB1M: indispensable role in translation of mitochondrial genes and mitochondrial function.
Nucleic Acids Res., 47, 2019
3TGV
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BU of 3tgv by Molmil
Crystal structure of HutZ,the heme storsge protein from Vibrio cholerae
Descriptor: BENZOIC ACID, Heme-binding protein HutZ
Authors:Liu, X, Gong, J, Wang, Z, Du, Q, Wei, T, Zhu, D, Huang, Y, Xu, S, Gu, L.
Deposit date:2011-08-17
Release date:2012-08-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Crystal structure of HutZ,the heme storsge protein from Vibrio cholerae
To be Published
4IGK
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BU of 4igk by Molmil
Structure of human BRCA1 BRCT in complex with ATRIP peptide
Descriptor: ATRIP peptide, Breast cancer type 1 susceptibility protein, GLYCEROL
Authors:Liu, X, Ladias, J.A.A.
Deposit date:2012-12-17
Release date:2013-10-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis for the BRCA1 BRCT Interaction with the Proteins ATRIP and BAAT1.
Biochemistry, 52, 2013
4IFI
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BU of 4ifi by Molmil
Structure of human BRCA1 BRCT in complex with BAAT peptide
Descriptor: ACETATE ION, BAAT peptide, Breast cancer type 1 susceptibility protein
Authors:Liu, X, Ladias, J.A.A.
Deposit date:2012-12-14
Release date:2013-10-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis for the BRCA1 BRCT Interaction with the Proteins ATRIP and BAAT1.
Biochemistry, 52, 2013

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