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7CY5
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BU of 7cy5 by Molmil
Crystal Structure of CMD1 in complex with vitamin C
Descriptor: ASCORBIC ACID, CITRIC ACID, FE (III) ION, ...
Authors:Li, W, Zhang, T, Sun, M, Ding, J.
Deposit date:2020-09-03
Release date:2020-12-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular mechanism for vitamin C-derived C 5 -glyceryl-methylcytosine DNA modification catalyzed by algal TET homologue CMD1.
Nat Commun, 12, 2021
4JYY
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BU of 4jyy by Molmil
Crystal structure of the azide and iron substituted Clostrium difficile SOD2 complex
Descriptor: AZIDE ION, FE (III) ION, Superoxide dismutase
Authors:Li, W, Ying, T.L, Wang, C.L, Zhao, Y, Wang, H.F, Tan, X.S.
Deposit date:2013-04-01
Release date:2014-04-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Crystal structure of the azide and iron substituted Clostrium difficile SOD2 complex
To be Published
4JZG
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BU of 4jzg by Molmil
Crystal structure of a single cambialistic SOD2 occupied by Manganese ion from Clostridium difficile
Descriptor: MANGANESE (II) ION, Superoxide dismutase
Authors:Li, W, Wang, C.L, Zhao, Y, Wang, H.F, Tan, S.X.
Deposit date:2013-04-02
Release date:2014-04-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.321 Å)
Cite:Crystal structure of a single cambialistic SOD2 occupied by Manganese ion from Clostridium difficile
To be Published
4JZ2
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BU of 4jz2 by Molmil
Crystal structure of Co ion substituted SOD2 from Clostridium difficile
Descriptor: COBALT (II) ION, Superoxide dismutase
Authors:Li, W, Ying, T.L, Wang, C.L, Zhao, Y, Wang, H.F, Tan, X.S.
Deposit date:2013-04-02
Release date:2014-04-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of Co ion substituted SOD2 from Clostridium difficile
To be Published
5Y6R
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BU of 5y6r by Molmil
Crystal structure of CSFV NS5B
Descriptor: GLYCEROL, Genome polyprotein, SULFATE ION
Authors:Li, W, Wu, B.
Deposit date:2017-08-13
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Crystal Structure of Classical Swine Fever Virus NS5B Reveals a Novel N-Terminal Domain
J. Virol., 92, 2018
6JCI
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BU of 6jci by Molmil
Crystal structure of Prolyl Endopeptidase from Haliotis discus hannai with SUAM-14746
Descriptor: 1-[4-oxidanyl-2-(1,3-thiazolidin-3-ylcarbonyl)pyrrolidin-1-yl]-4-[2-[(~{E})-2-phenylethenyl]phenoxy]butan-1-one, GLYCEROL, Prolyl endopeptidase
Authors:Li, W, Cao, M.
Deposit date:2019-01-28
Release date:2020-02-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.493 Å)
Cite:Crystal structure of Haliotis discus hannai Prolyl Endopeptidase
To Be Published
4G74
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BU of 4g74 by Molmil
Crystal structure of NDH with Quinone
Descriptor: 2,3-DIMETHOXY-5-METHYL-6-(3,11,15,19-TETRAMETHYL-EICOSA-2,6,10,14,18-PENTAENYL)-[1,4]BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, FRAGMENT OF TRITON X-100, ...
Authors:Li, W, Feng, Y, Ge, J, Yang, M.
Deposit date:2012-07-19
Release date:2012-10-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structural insight into the type-II mitochondrial NADH dehydrogenases.
Nature, 491, 2012
4G73
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BU of 4g73 by Molmil
Crystal structure of NDH with NADH and Quinone
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 2,3-DIMETHOXY-5-METHYL-6-(3,11,15,19-TETRAMETHYL-EICOSA-2,6,10,14,18-PENTAENYL)-[1,4]BENZOQUINONE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Li, W, Feng, Y, Ge, J, Yang, M.
Deposit date:2012-07-19
Release date:2012-10-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.522 Å)
Cite:Structural insight into the type-II mitochondrial NADH dehydrogenases.
Nature, 491, 2012
7D0P
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BU of 7d0p by Molmil
Crystal structure of human HBO1-BRPF2 in complex with propionyl-coenzyme A
Descriptor: BRD1 protein, CHLORIDE ION, Histone acetyltransferase KAT7, ...
Authors:Li, W, Ding, J.
Deposit date:2020-09-11
Release date:2021-07-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:HBO1 is a versatile histone acyltransferase critical for promoter histone acylations.
Nucleic Acids Res., 49, 2021
7D0Q
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BU of 7d0q by Molmil
Crystal structure of human HBO1-BRPF2 in complex with butyryl-coenzyme A
Descriptor: 1,2-ETHANEDIOL, BRD1 protein, Butyryl Coenzyme A, ...
Authors:Li, W, Ding, J.
Deposit date:2020-09-11
Release date:2021-07-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:HBO1 is a versatile histone acyltransferase critical for promoter histone acylations.
Nucleic Acids Res., 49, 2021
7D0S
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BU of 7d0s by Molmil
Crystal structure of human HBO1-BRPF2 in complex with succinyl-coenzyme A
Descriptor: BRD1 protein, Histone acetyltransferase KAT7, SUCCINYL-COENZYME A, ...
Authors:Li, W, Ding, J.
Deposit date:2020-09-11
Release date:2021-07-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:HBO1 is a versatile histone acyltransferase critical for promoter histone acylations.
Nucleic Acids Res., 49, 2021
7D0O
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BU of 7d0o by Molmil
Crystal structure of human HBO1-BRPF2 in apo form
Descriptor: 1,2-ETHANEDIOL, BRD1 protein, Histone acetyltransferase KAT7, ...
Authors:Li, W, Ding, J.
Deposit date:2020-09-11
Release date:2021-07-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:HBO1 is a versatile histone acyltransferase critical for promoter histone acylations.
Nucleic Acids Res., 49, 2021
7D0R
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BU of 7d0r by Molmil
Crystal structure of human HBO1-BRPF2 in complex with crotonoyl-coenzyme A
Descriptor: 1,2-ETHANEDIOL, BRD1 protein, CROTONYL COENZYME A, ...
Authors:Li, W, Ding, J.
Deposit date:2020-09-11
Release date:2021-07-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:HBO1 is a versatile histone acyltransferase critical for promoter histone acylations.
Nucleic Acids Res., 49, 2021
6V9T
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BU of 6v9t by Molmil
Tudor domain of TDRD3 in complex with a small molecule
Descriptor: 4-methyl-2,3,4,5,6,7-hexahydrodicyclopenta[b,e]pyridin-8(1H)-imine, Tudor domain-containing protein 3, UNKNOWN ATOM OR ION
Authors:Li, W, Tempel, W, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2019-12-16
Release date:2019-12-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.154 Å)
Cite:A small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II.
Nat Commun, 13, 2022
3EP2
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BU of 3ep2 by Molmil
Model of Phe-tRNA(Phe) in the ribosomal pre-accommodated state revealed by cryo-EM
Descriptor: 30S ribosomal protein S12, 50S ribosomal protein L11, Elongation factor Tu, ...
Authors:Frank, J, Li, W, Agirrezabala, X.
Deposit date:2008-09-29
Release date:2008-12-16
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Recognition of aminoacyl-tRNA: a common molecular mechanism revealed by cryo-EM.
Embo J., 27, 2008
3UDC
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BU of 3udc by Molmil
Crystal structure of a membrane protein
Descriptor: Small-conductance mechanosensitive channel, C-terminal peptide from Small-conductance mechanosensitive channel
Authors:Li, W, Ge, J, Yang, M.
Deposit date:2011-10-28
Release date:2012-10-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.355 Å)
Cite:Structure and molecular mechanism of an anion-selective mechanosensitive channel of small conductance
Proc.Natl.Acad.Sci.USA, 109, 2012
2Z9Q
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BU of 2z9q by Molmil
Transfer RNA in the hybrid P/E state
Descriptor: tRNA
Authors:Frank, J, Li, W.
Deposit date:2007-09-25
Release date:2007-10-16
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (11.7 Å)
Cite:Transfer RNA in the hybrid P/E state
To be Published
1JT8
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BU of 1jt8 by Molmil
ARCHAEAL INITIATION FACTOR-1A, AIF-1A
Descriptor: PROBABLE TRANSLATION INITIATION FACTOR 1A
Authors:Hoffman, D.W, Li, W.
Deposit date:2001-08-20
Release date:2001-09-05
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure and dynamics of translation initiation factor aIF-1A from the archaeon Methanococcus jannaschii determined by NMR spectroscopy
Protein Sci., 10, 2001
4G6H
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BU of 4g6h by Molmil
Crystal structure of NDH with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, ...
Authors:Li, W, Feng, Y, Ge, J, Yang, M.
Deposit date:2012-07-19
Release date:2012-10-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.262 Å)
Cite:Structural insight into the type-II mitochondrial NADH dehydrogenases.
Nature, 491, 2012
4G6G
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BU of 4g6g by Molmil
Crystal structure of NDH with TRT
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, FRAGMENT OF TRITON X-100, MAGNESIUM ION, ...
Authors:Li, W, Feng, Y, Ge, J, Yang, M.
Deposit date:2012-07-19
Release date:2012-10-24
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structural insight into the type-II mitochondrial NADH dehydrogenases.
Nature, 491, 2012
4OD4
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BU of 4od4 by Molmil
Apo structure of a UbiA homolog from Aeropyrum pernix K1
Descriptor: 4-hydroxybenzoate octaprenyltransferase
Authors:Li, W, Cheng, W.
Deposit date:2014-01-09
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.301 Å)
Cite:Structural insights into ubiquinone biosynthesis in membranes.
Science, 343, 2014
4OD5
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BU of 4od5 by Molmil
Substrate-bound structure of a UbiA homolog from Aeropyrum pernix K1
Descriptor: 4-hydroxybenzoate octaprenyltransferase, GERANYL S-THIOLODIPHOSPHATE, MAGNESIUM ION, ...
Authors:Li, W, Cheng, W.
Deposit date:2014-01-10
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.557 Å)
Cite:Structural insights into ubiquinone biosynthesis in membranes.
Science, 343, 2014
3EQ3
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BU of 3eq3 by Molmil
Model of tRNA(Trp)-EF-Tu in the ribosomal pre-accommodated state revealed by cryo-EM
Descriptor: 30S ribosomal protein S12, 50S ribosomal protein L11, Elongation factor Tu, ...
Authors:Frank, J, Li, W, Agirrezabala, X.
Deposit date:2008-09-30
Release date:2008-12-16
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Recognition of aminoacyl-tRNA: a common molecular mechanism revealed by cryo-EM.
Embo J., 27, 2008
3EQ4
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BU of 3eq4 by Molmil
Model of tRNA(Leu)-EF-Tu in the ribosomal pre-accommodated state revealed by cryo-EM
Descriptor: 30S ribosomal protein S12, 50S ribosomal protein L11, Elongation factor Tu, ...
Authors:Frank, J, Li, W, Agirrezabala, X.
Deposit date:2008-09-30
Release date:2008-12-16
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Recognition of aminoacyl-tRNA: a common molecular mechanism revealed by cryo-EM.
Embo J., 27, 2008
4U86
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BU of 4u86 by Molmil
Human Pin1 with cysteine sulfonic acid 113
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Li, W, Zhang, Y.
Deposit date:2014-08-01
Release date:2015-04-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Pin1 cysteine-113 oxidation inhibits its catalytic activity and cellular function in Alzheimer's disease.
Neurobiol.Dis., 76, 2015

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