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2RQW
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BU of 2rqw by Molmil
Solution structure of Bem1p SH3CI domain complexed with Ste20p-PRR peptide
Descriptor: 24-meric peptide from Serine/threonine-protein kinase STE20, Bud emergence protein 1
Authors:Takaku, T, Ogura, K, Inagaki, F.
Deposit date:2009-12-21
Release date:2010-04-21
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of a novel Cdc42-binding module of Bem1 and its interaction with Ste20 and Cdc42
J.Biol.Chem., 285, 2010
2RQV
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BU of 2rqv by Molmil
Solution structure of SH3CI domain of Bem1p
Descriptor: Bud emergence protein 1
Authors:Takaku, T, Ogura, K, Inagaki, F.
Deposit date:2009-12-21
Release date:2010-04-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of a novel Cdc42-binding module of Bem1 and its interaction with Ste20 and Cdc42
J.Biol.Chem., 285, 2010
2RQE
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BU of 2rqe by Molmil
Solution structure of the silkworm bGRP/GNBP3 N-terminal domain reveals the mechanism for b-1,3-glucan specific recognition
Descriptor: Beta-1,3-glucan-binding protein
Authors:Takahasi, K, Ochiai, M, Horiuchi, M, Kumeta, H, Ogura, K, Ashida, M, Inagaki, F.
Deposit date:2009-04-22
Release date:2009-06-23
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the silkworm betaGRP/GNBP3 N-terminal domain reveals the mechanism for beta-1,3-glucan-specific recognition.
Proc.Natl.Acad.Sci.USA, 106, 2009
2RPV
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BU of 2rpv by Molmil
Solution Structure of GB1 with LBT probe
Descriptor: Immunoglobulin G-binding protein G, LANTHANUM (III) ION
Authors:Saio, T, Ogura, K, Yokochi, M, Kobashigawa, Y, Inagaki, F.
Deposit date:2008-10-28
Release date:2009-09-15
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Two-point anchoring of a lanthanide-binding peptide to a target protein enhances the paramagnetic anisotropic effect
J.Biomol.Nmr, 44, 2009
2RMJ
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BU of 2rmj by Molmil
Solution structure of RIG-I C-terminal domain
Descriptor: Probable ATP-dependent RNA helicase DDX58
Authors:Takahasi, K, Yoneyama, M, Nihishori, T, Hirai, R, Narita, R, Gale Jr, M, Fujita, T, Inagaki, F.
Deposit date:2007-10-23
Release date:2008-03-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Nonself RNA-Sensing Mechanism of RIG-I Helicase and Activation of Antiviral Immune Responses
Mol.Cell, 29, 2008
2RSE
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BU of 2rse by Molmil
NMR structure of FKBP12-mTOR FRB domain-rapamycin complex structure determined based on PCS
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP1A, Serine/threonine-protein kinase mTOR, TERBIUM(III) ION
Authors:Kobashigawa, Y, Ushio, M, Saio, T, Inagaki, F.
Deposit date:2012-01-25
Release date:2012-05-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Convenient method for resolving degeneracies due to symmetry of the magnetic susceptibility tensor and its application to pseudo contact shift-based protein-protein complex structure determination.
J.Biomol.Nmr, 53, 2012
1MKC
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BU of 1mkc by Molmil
C-TERMINAL DOMAIN OF MIDKINE
Descriptor: PROTEIN (MIDKINE)
Authors:Iwasaki, W, Nagata, K, Hatanaka, H, Ogura, K, Inui, T, Kimura, T, Muramatsu, T, Yoshida, K, Tasumi, M, Inagaki, F.
Deposit date:1999-03-16
Release date:1999-03-23
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of midkine, a new heparin-binding growth factor.
EMBO J., 16, 1997
1Q1O
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BU of 1q1o by Molmil
Solution Structure of the PB1 Domain of Cdc24p (Long Form)
Descriptor: Cell division control protein 24
Authors:Yoshinaga, S, Kohjima, M, Ogura, K, Yokochi, M, Takeya, R, Ito, T, Sumimoto, H, Inagaki, F.
Deposit date:2003-07-22
Release date:2003-10-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The PB1 domain and the PC motif-containing region are structurally similar protein binding modules
EMBO J., 22, 2003
1MKN
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BU of 1mkn by Molmil
N-TERMINAL HALF OF MIDKINE
Descriptor: PROTEIN (MIDKINE)
Authors:Iwasaki, W, Nagata, K, Hatanaka, H, Ogura, K, Inui, T, Kimura, T, Muramatsu, T, Yoshida, K, Tasumi, M, Inagaki, F.
Deposit date:1999-03-16
Release date:1999-03-23
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of midkine, a new heparin-binding growth factor.
EMBO J., 16, 1997
1ERA
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BU of 1era by Molmil
TERTIARY STRUCTURE OF ERABUTOXIN B IN AQUEOUS SOLUTION ELUCIDATED BY TWO-DIMENSIONAL NUCLEAR MAGNETIC RESONANCE
Descriptor: ERABUTOXIN B
Authors:Hatanaka, H, Kohda, D, Inagaki, F.
Deposit date:1994-03-28
Release date:1994-06-22
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Tertiary structure of erabutoxin b in aqueous solution as elucidated by two-dimensional nuclear magnetic resonance.
J.Mol.Biol., 240, 1994
1GCQ
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BU of 1gcq by Molmil
CRYSTAL STRUCTURE OF VAV AND GRB2 SH3 DOMAINS
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2, VAV PROTO-ONCOGENE
Authors:Nishida, M, Nagata, K, Hachimori, Y, Ogura, K, Inagaki, F.
Deposit date:2000-08-08
Release date:2001-08-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Novel recognition mode between Vav and Grb2 SH3 domains.
EMBO J., 20, 2001
1FRA
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BU of 1fra by Molmil
TERTIARY STRUCTURE OF ERABUTOXIN B IN AQUEOUS SOLUTION ELUCIDATED BY TWO-DIMENSIONAL NUCLEAR MAGNETIC RESONANCE
Descriptor: ERABUTOXIN B
Authors:Hatanaka, H, Kohda, D, Inagaki, F.
Deposit date:1994-03-28
Release date:1994-06-22
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Tertiary structure of erabutoxin b in aqueous solution as elucidated by two-dimensional nuclear magnetic resonance.
J.Mol.Biol., 240, 1994
1GFD
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BU of 1gfd by Molmil
SOLUTION STRUCTURE AND LIGAND-BINDING SITE OF THE C-TERMINAL SH3 DOMAIN OF GRB2
Descriptor: GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2
Authors:Kohda, D, Terasawa, H, Hatanaka, H, Inagaki, F.
Deposit date:1994-06-13
Release date:1994-08-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure and ligand-binding site of the carboxy-terminal SH3 domain of GRB2.
Structure, 2, 1994
1GFC
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BU of 1gfc by Molmil
SOLUTION STRUCTURE AND LIGAND-BINDING SITE OF THE C-TERMINAL SH3 DOMAIN OF GRB2
Descriptor: GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2
Authors:Kohda, D, Terasawa, H, Hatanaka, H, Inagaki, F.
Deposit date:1994-06-13
Release date:1994-08-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure and ligand-binding site of the carboxy-terminal SH3 domain of GRB2.
Structure, 2, 1994
1GCP
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BU of 1gcp by Molmil
CRYSTAL STRUCTURE OF VAV SH3 DOMAIN
Descriptor: VAV PROTO-ONCOGENE
Authors:Nishida, M, Nagata, K, Hachimori, Y, Ogura, K, Inagaki, F.
Deposit date:2000-08-08
Release date:2001-08-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Novel recognition mode between Vav and Grb2 SH3 domains.
EMBO J., 20, 2001
1WLP
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BU of 1wlp by Molmil
Solution Structure Of The P22Phox-P47Phox Complex
Descriptor: Cytochrome b-245 light chain, Neutrophil cytosol factor 1
Authors:Ogura, K, Torikai, S, Saikawa, K, Yuzawa, S, Sumimoto, H, Inagaki, F.
Deposit date:2004-06-29
Release date:2005-10-04
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR solution structure of the tandem Src homology 3 domains of p47phox complexed with a p22phox-derived proline-rich peptide
J.Biol.Chem., 281, 2006
1WMJ
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BU of 1wmj by Molmil
Solution structure of Thioredoxin type h from Oryza sativa
Descriptor: Thioredoxin H-type
Authors:Kumeta, H, Ogura, H, Akagi, K, Katoh, E, Inagaki, F.
Deposit date:2004-07-09
Release date:2005-10-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of Thioredoxin type h from Oryza sativa
To be Published
1WMH
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BU of 1wmh by Molmil
Crystal structure of a PB1 domain complex of Protein kinase c iota and Par6 alpha
Descriptor: Partitioning defective-6 homolog alpha, Protein kinase C, iota type
Authors:Hirano, Y, Yoshinaga, S, Suzuki, N.N, Horiuchi, M, Kohjima, M, Takeya, R, Sumimoto, H, Inagaki, F.
Deposit date:2004-07-09
Release date:2004-12-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of a Cell Polarity Regulator, a Complex between Atypical PKC and Par6 PB1 Domains
J.Biol.Chem., 280, 2005
1WZ3
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BU of 1wz3 by Molmil
The crystal structure of plant ATG12
Descriptor: autophagy 12b
Authors:Suzuki, N.N, Yoshimoto, K, Fujioka, Y, Ohsumi, Y, Inagaki, F.
Deposit date:2005-02-22
Release date:2005-06-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of plant ATG12 and its biological implication in autophagy.
Autophagy, 1, 2005
1X0N
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BU of 1x0n by Molmil
NMR structure of growth factor receptor binding protein SH2 domain complexed with the inhibitor
Descriptor: 4-[(10S,14S,18S)-18-(2-AMINO-2-OXOETHYL)-14-(1-NAPHTHYLMETHYL)-8,17,20-TRIOXO-7,16,19-TRIAZASPIRO[5.14]ICOS-11-EN-10-YL]BENZYLPHOSPHONIC ACID, Growth factor receptor-bound protein 2
Authors:Ogura, K, Shiga, T, Yuzawa, S, Yokochi, M, Burke, T.R, Inagaki, F.
Deposit date:2005-03-24
Release date:2005-04-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR structure of growth factor receptor binding protein SH2 domain complexed with the inhibitor
To be Published
1WLZ
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BU of 1wlz by Molmil
Crystal structure of DJBP fragment which was obtained by limited proteolysis
Descriptor: CAP-binding protein complex interacting protein 1 isoform a
Authors:Honbou, K, Suzuki, N, Horiuchi, M, Taira, T, Niki, T, Ariga, H, Inagaki, F.
Deposit date:2004-07-01
Release date:2005-08-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of DJBP Fragment which was obtained by Limited Proteolysis
To be Published
1VD2
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BU of 1vd2 by Molmil
Solution Structure of the PB1 domain of PKCiota
Descriptor: Protein kinase C, iota type
Authors:Hirano, Y, Yoshinaga, S, Yokochi, M, Ogura, K, Noda, Y, Sumimoto, H, Inagaki, F.
Deposit date:2004-03-18
Release date:2004-09-14
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of atypical protein kinase C PB1 domain and its mode of interaction with ZIP/p62 and MEK5
J.Biol.Chem., 279, 2004
1Z9Q
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BU of 1z9q by Molmil
Solution structure of SH3 domain of p40phox
Descriptor: Neutrophil cytosol factor 4
Authors:Adachi, S, Ogura, K, Fujioka, Y, Inagaki, F.
Deposit date:2005-04-04
Release date:2006-03-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of SH3 domain of p40phox
to be published
2DYM
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BU of 2dym by Molmil
The crystal structure of Saccharomyces cerevisiae Atg5- Atg16(1-46) complex
Descriptor: Autophagy protein 16, Autophagy protein 5
Authors:Matsushita, M, Suzuki, N.N, Inagaki, F.
Deposit date:2006-09-15
Release date:2006-12-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of Atg5.Atg16, a complex essential for autophagy
J.Biol.Chem., 282, 2007
2DYT
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BU of 2dyt by Molmil
The crystal structure of Saccharomyces cerevisiae Atg3
Descriptor: Autophagy-related protein 3, SULFATE ION
Authors:Yamada, Y, Suzuki, N.N, Inagaki, F.
Deposit date:2006-09-17
Release date:2007-01-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of Atg3, an autophagy-related ubiquitin carrier protein (E2) enzyme that mediates Atg8 lipidation
J.Biol.Chem., 282, 2007

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