2DYM

The crystal structure of Saccharomyces cerevisiae Atg5- Atg16(1-46) complex

Summary for 2DYM

Related2DYO
DescriptorAutophagy protein 5, Autophagy protein 16 (3 entities in total)
Functional Keywordsubiquitin-fold, herix-bundle, protein turnover-protein turnover complex, protein turnover/protein turnover
Biological sourceSaccharomyces cerevisiae (baker's yeast)
Cellular locationCytoplasm Q12380
Vacuole (Potential) Q03818
Total number of polymer chains8
Total molecular weight157449.34
Authors
Matsushita, M.,Suzuki, N.N.,Inagaki, F. (deposition date: 2006-09-15, release date: 2006-12-26, Last modification date: 2011-07-13)
Primary citation
Matsushita, M.,Suzuki, N.N.,Obara, K.,Fujioka, Y.,Ohsumi, Y.,Inagaki, F.
Structure of Atg5.Atg16, a complex essential for autophagy
J.Biol.Chem., 282:6763-6772, 2007
PubMed: 17192262 (PDB entries with the same primary citation)
DOI: 10.1074/jbc.M609876200
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.2 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.25013 0.4% 5.0% 4.6%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload
171588
PDB entries from 2020-11-25